RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 ATMINO43313 823 aaPredicted RBP11.27□□□□□ -0.61
LSM5-202ENST00000409292 APBA3O96018 575 aa11.27□□□□□ -0.61
LSM5-202ENST00000409292 NUDT16Q96DE0 195 aaKnown RBP11.26□□□□□ -0.61
LSM5-202ENST00000409292 DISP2A7MBM2 1401 aa11.26□□□□□ -0.61
LSM5-202ENST00000409292 TRIM37O94972 964 aa11.25□□□□□ -0.61
LSM5-202ENST00000409292 TIE1P35590 1138 aa11.25□□□□□ -0.61
LSM5-202ENST00000409292 FAM182BQ5T319 152 aa11.25□□□□□ -0.61
LSM5-202ENST00000409292 DCAF8Q5TAQ9 597 aa11.25□□□□□ -0.61
LSM5-202ENST00000409292 USP35Q9P2H5 1018 aa11.25□□□□□ -0.61
LSM5-202ENST00000409292 PPP1R1BQ9UD71 204 aaPredicted RBP11.25□□□□□ -0.61
LSM5-202ENST00000409292 PCDHB13Q9Y5F0 798 aa11.25□□□□□ -0.61
LSM5-202ENST00000409292 SPATA31A1Q5TZJ5 1347 aa11.25□□□□□ -0.61
LSM5-202ENST00000409292 KIAA0232Q92628 1395 aa11.25□□□□□ -0.61
LSM5-202ENST00000409292 ATP7BP35670 1465 aa11.25□□□□□ -0.61
LSM5-202ENST00000409292 NRAPQ86VF7 1730 aa11.24□□□□□ -0.61
LSM5-202ENST00000409292 EP400Q96L91 3159 aa11.24□□□□□ -0.61
LSM5-202ENST00000409292 ZC3H6P61129 1189 aaKnown RBP11.24□□□□□ -0.61
LSM5-202ENST00000409292 EZH2Q15910 746 aaKnown RBP11.24□□□□□ -0.61
LSM5-202ENST00000409292 SLC39A7Q92504 469 aa11.24□□□□□ -0.61
LSM5-202ENST00000409292 PRR36Q9H6K5 1346 aa11.24□□□□□ -0.61
LSM5-202ENST00000409292 C7P10643 843 aa11.23□□□□□ -0.61
LSM5-202ENST00000409292 CHRNA2Q15822 529 aa11.23□□□□□ -0.61
LSM5-202ENST00000409292 BARGINQ6ZT62 677 aa11.23□□□□□ -0.61
LSM5-202ENST00000409292 NLRP13Q86W25 1043 aa11.23□□□□□ -0.61
LSM5-202ENST00000409292 ABTB2Q8N961 1025 aa11.23□□□□□ -0.61
LSM5-202ENST00000409292 THRAP3Q9Y2W1 955 aaKnown RBP11.23□□□□□ -0.61
LSM5-202ENST00000409292 ALS2Q96Q42 1657 aa11.23□□□□□ -0.61
LSM5-202ENST00000409292 ITSN1Q15811 1721 aa11.23□□□□□ -0.61
LSM5-202ENST00000409292 TRPM3Q9HCF6 1732 aaPredicted RBP11.23□□□□□ -0.61
LSM5-202ENST00000409292 ADGRB1O14514 1584 aa11.22□□□□□ -0.61
LSM5-202ENST00000409292 GSE1Q14687 1217 aa11.22□□□□□ -0.61
LSM5-202ENST00000409292 PELP1Q8IZL8 1130 aaKnown RBP11.22□□□□□ -0.61
LSM5-202ENST00000409292 TCP11L2Q8N4U5 519 aa11.22□□□□□ -0.61
LSM5-202ENST00000409292 CDK19Q9BWU1 502 aa11.22□□□□□ -0.61
LSM5-202ENST00000409292 RAB3GAP2Q9H2M9 1393 aa11.22□□□□□ -0.61
LSM5-202ENST00000409292 NUTM2GQ5VZR2 741 aa11.21□□□□□ -0.61
LSM5-202ENST00000409292 CAMKK2Q96RR4 588 aa11.21□□□□□ -0.61
LSM5-202ENST00000409292 BMP2KQ9NSY1 1161 aaPredicted RBP11.21□□□□□ -0.61
LSM5-202ENST00000409292 SRCAPQ6ZRS2 3230 aa11.2□□□□□ -0.62
LSM5-202ENST00000409292 ACEP12821 1306 aa11.2□□□□□ -0.62
LSM5-202ENST00000409292 SRPK2P78362 688 aaKnown RBP11.2□□□□□ -0.62
LSM5-202ENST00000409292 SPON1Q9HCB6 807 aa11.2□□□□□ -0.62
LSM5-202ENST00000409292 METRNQ9UJH8 293 aa11.2□□□□□ -0.62
LSM5-202ENST00000409292 THSD7AQ9UPZ6 1657 aa11.2□□□□□ -0.62
LSM5-202ENST00000409292 SSH2Q76I76 1423 aa11.19□□□□□ -0.62
LSM5-202ENST00000409292 ATN1P54259 1190 aaPredicted RBP11.19□□□□□ -0.62
LSM5-202ENST00000409292 BRD4O60885 1362 aaPredicted RBP11.18□□□□□ -0.62
LSM5-202ENST00000409292 PLEKHG3A1L390 1219 aa11.18□□□□□ -0.62
LSM5-202ENST00000409292 ZBTB7CA1YPR0 619 aa11.18□□□□□ -0.62
LSM5-202ENST00000409292 YY1P25490 414 aa11.18□□□□□ -0.62
LSM5-202ENST00000409292 POLR3AO14802 1390 aaPredicted RBP11.17□□□□□ -0.62
LSM5-202ENST00000409292 CPDO75976 1380 aa11.17□□□□□ -0.62
LSM5-202ENST00000409292 LARP1Q6PKG0 1096 aaKnown RBP11.17□□□□□ -0.62
LSM5-202ENST00000409292 TRPC6Q9Y210 931 aa11.17□□□□□ -0.62
LSM5-202ENST00000409292 TNS1Q9HBL0 1735 aaKnown RBP11.16□□□□□ -0.62
LSM5-202ENST00000409292 KCNQ2O43526 872 aa11.16□□□□□ -0.62
LSM5-202ENST00000409292 GCP02774 474 aa11.16□□□□□ -0.62
LSM5-202ENST00000409292 IFNL1Q8IU54 200 aa11.16□□□□□ -0.62
LSM5-202ENST00000409292 CDCA7Q9BWT1 371 aaPredicted RBP11.16□□□□□ -0.62
LSM5-202ENST00000409292 TTLL13PA6NNM8 815 aa11.15□□□□□ -0.62
LSM5-202ENST00000409292 NLRP6P59044 892 aa11.15□□□□□ -0.62
LSM5-202ENST00000409292 DDB1Q16531 1140 aa11.15□□□□□ -0.62
LSM5-202ENST00000409292 TOM1L2Q6ZVM7 507 aa11.15□□□□□ -0.62
LSM5-202ENST00000409292 SPOCK2Q92563 424 aa11.15□□□□□ -0.62
LSM5-202ENST00000409292 PHRF1Q9P1Y6 1649 aaKnown RBP11.15□□□□□ -0.62
LSM5-202ENST00000409292 CENPJQ9HC77 1338 aaPredicted RBP11.14□□□□□ -0.63
LSM5-202ENST00000409292 PYGBP11216 843 aa11.14□□□□□ -0.63
LSM5-202ENST00000409292 IFNLR1Q8IU57 520 aaPredicted RBP11.14□□□□□ -0.63
LSM5-202ENST00000409292 OVOS2A0A0G2JMS6 1433 aa11.14□□□□□ -0.63
LSM5-202ENST00000409292 OVOS2A0A0J9YW53 1432 aa11.14□□□□□ -0.63
LSM5-202ENST00000409292 OVOS2Q6IE36 1432 aa11.14□□□□□ -0.63
LSM5-202ENST00000409292 ARHGEF28Q8N1W1 1705 aaKnown RBP11.14□□□□□ -0.63
LSM5-202ENST00000409292 CRYBG1Q9Y4K1 1723 aa11.14□□□□□ -0.63
LSM5-202ENST00000409292 NINLQ9Y2I6 1382 aa11.14□□□□□ -0.63
LSM5-202ENST00000409292 USP19O94966 1318 aa11.13□□□□□ -0.63
LSM5-202ENST00000409292 CRB1P82279 1406 aa11.13□□□□□ -0.63
LSM5-202ENST00000409292 PPIP5K1Q6PFW1 1433 aa11.13□□□□□ -0.63
LSM5-202ENST00000409292 CSB-PGBD3P0DP91 1061 aa11.13□□□□□ -0.63
LSM5-202ENST00000409292 BCL11BQ9C0K0 894 aaPredicted RBP11.13□□□□□ -0.63
LSM5-202ENST00000409292 PLSCR1O15162 318 aa11.12□□□□□ -0.63
LSM5-202ENST00000409292 KCNH5Q8NCM2 988 aa11.12□□□□□ -0.63
LSM5-202ENST00000409292 CAMTA1Q9Y6Y1 1673 aa11.11□□□□□ -0.63
LSM5-202ENST00000409292 CABP2Q9NPB3 220 aa11.11□□□□□ -0.63
LSM5-202ENST00000409292 STK32BQ9NY57 414 aa11.11□□□□□ -0.63
LSM5-202ENST00000409292 AATKQ6ZMQ8 1374 aa11.11□□□□□ -0.63
LSM5-202ENST00000409292 NRKQ7Z2Y5 1582 aa11.11□□□□□ -0.63
LSM5-202ENST00000409292 EVC2Q86UK5 1308 aa11.1□□□□□ -0.63
LSM5-202ENST00000409292 KIAA1210Q9ULL0 1709 aa11.1□□□□□ -0.63
LSM5-202ENST00000409292 COL5A2P05997 1499 aaPredicted RBP11.1□□□□□ -0.63
LSM5-202ENST00000409292 POTEB2H3BUK9 544 aa11.09□□□□□ -0.63
LSM5-202ENST00000409292 EXOC5O00471 708 aa11.09□□□□□ -0.63
LSM5-202ENST00000409292 IER5LQ5T953 404 aa11.09□□□□□ -0.63
LSM5-202ENST00000409292 CABP1Q9NZU7 370 aa11.09□□□□□ -0.63
LSM5-202ENST00000409292 WDR17Q8IZU2 1322 aa11.09□□□□□ -0.63
LSM5-202ENST00000409292 TOPAZ1Q8N9V7 1692 aa11.08□□□□□ -0.64
LSM5-202ENST00000409292 RREB1Q92766 1687 aa11.08□□□□□ -0.64
LSM5-202ENST00000409292 CHRM1P11229 460 aaPredicted RBP11.08□□□□□ -0.64
LSM5-202ENST00000409292 TMEM106CQ9BVX2 250 aa11.08□□□□□ -0.64
LSM5-202ENST00000409292 TRIM35Q9UPQ4 493 aa11.08□□□□□ -0.64
LSM5-202ENST00000409292 PARP4Q9UKK3 1724 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms