RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 RRS1Q15050 365 aaKnown RBP20.46■□□□□ 0.87
LSP1-204ENST00000406638 PDE3AQ14432 1141 aa20.46■□□□□ 0.87
LSP1-204ENST00000406638 CHMP5Q9NZZ3 219 aa20.46■□□□□ 0.87
LSP1-204ENST00000406638 PTCH1Q13635 1447 aa20.46■□□□□ 0.87
LSP1-204ENST00000406638 POLKQ9UBT6 870 aa20.45■□□□□ 0.86
LSP1-204ENST00000406638 CDC42BPGQ6DT37 1551 aa20.45■□□□□ 0.86
LSP1-204ENST00000406638 SETD1BQ9UPS6 1966 aaKnown RBP20.45■□□□□ 0.86
LSP1-204ENST00000406638 E9PSI1 815 aa20.44■□□□□ 0.86
LSP1-204ENST00000406638 TRIM44Q96DX7 344 aaPredicted RBP20.44■□□□□ 0.86
LSP1-204ENST00000406638 CFAP53Q96M91 514 aa20.44■□□□□ 0.86
LSP1-204ENST00000406638 ZNF142P52746 1687 aaPredicted RBP20.44■□□□□ 0.86
LSP1-204ENST00000406638 PDZRN3Q9UPQ7 1066 aa20.44■□□□□ 0.86
LSP1-204ENST00000406638 PCDHB15Q9Y5E8 787 aa20.44■□□□□ 0.86
LSP1-204ENST00000406638 EDC4Q6P2E9 1401 aaKnown RBP20.44■□□□□ 0.86
LSP1-204ENST00000406638 XRN1Q8IZH2 1706 aaKnown RBP20.44■□□□□ 0.86
LSP1-204ENST00000406638 ADGRB2O60241 1585 aa20.42■□□□□ 0.86
LSP1-204ENST00000406638 DIP2AQ14689 1571 aa20.42■□□□□ 0.86
LSP1-204ENST00000406638 TCP11L2Q8N4U5 519 aa20.41■□□□□ 0.86
LSP1-204ENST00000406638 NPHP4O75161 1426 aaPredicted RBP20.41■□□□□ 0.86
LSP1-204ENST00000406638 TTC21BQ7Z4L5 1316 aa20.41■□□□□ 0.86
LSP1-204ENST00000406638 RGPD8O14715 1765 aaPredicted RBP20.41■□□□□ 0.86
LSP1-204ENST00000406638 KIF20BQ96Q89 1820 aa20.41■□□□□ 0.86
LSP1-204ENST00000406638 PLEKHG3A1L390 1219 aa20.4■□□□□ 0.86
LSP1-204ENST00000406638 TNNQ9UQP3 1299 aa20.4■□□□□ 0.86
LSP1-204ENST00000406638 COL3A1P02461 1466 aaPredicted RBP20.4■□□□□ 0.86
LSP1-204ENST00000406638 MFAP1P55081 439 aaKnown RBP20.4■□□□□ 0.86
LSP1-204ENST00000406638 NUTM2GQ5VZR2 741 aa20.4■□□□□ 0.86
LSP1-204ENST00000406638 GAS2L3Q86XJ1 694 aa20.4■□□□□ 0.86
LSP1-204ENST00000406638 NGDNQ8NEJ9 315 aaKnown RBP20.4■□□□□ 0.86
LSP1-204ENST00000406638 COG3Q96JB2 828 aa20.39■□□□□ 0.85
LSP1-204ENST00000406638 C22orf23Q9BZE7 217 aa20.39■□□□□ 0.85
LSP1-204ENST00000406638 RUNDC1Q96C34 613 aa20.38■□□□□ 0.85
LSP1-204ENST00000406638 ANKRD26Q9UPS8 1709 aa20.37■□□□□ 0.85
LSP1-204ENST00000406638 RLBP1P12271 317 aa20.37■□□□□ 0.85
LSP1-204ENST00000406638 ZNF692Q9BU19 519 aaPredicted RBP20.37■□□□□ 0.85
LSP1-204ENST00000406638 KDM4FA0A1W2PPD8 638 aa20.37■□□□□ 0.85
LSP1-204ENST00000406638 PDCL3Q9H2J4 239 aa20.37■□□□□ 0.85
LSP1-204ENST00000406638 USP6P35125 1406 aa20.36■□□□□ 0.85
LSP1-204ENST00000406638 DIAPH1O60610 1272 aaKnown RBP20.36■□□□□ 0.85
LSP1-204ENST00000406638 WWC1Q8IX03 1113 aa20.36■□□□□ 0.85
LSP1-204ENST00000406638 BCL2L13Q9BXK5 485 aa20.36■□□□□ 0.85
LSP1-204ENST00000406638 MON2Q7Z3U7 1717 aa20.36■□□□□ 0.85
LSP1-204ENST00000406638 TOPAZ1Q8N9V7 1692 aa20.36■□□□□ 0.85
LSP1-204ENST00000406638 DDX11L8A8MPP1 907 aa20.36■□□□□ 0.85
LSP1-204ENST00000406638 HMOX1P09601 288 aa20.36■□□□□ 0.85
LSP1-204ENST00000406638 C14orf37Q86TY3 774 aa20.36■□□□□ 0.85
LSP1-204ENST00000406638 TPM2P07951 284 aa20.35■□□□□ 0.85
LSP1-204ENST00000406638 KIAA1211Q6ZU35 1233 aa20.35■□□□□ 0.85
LSP1-204ENST00000406638 PIK3R4Q99570 1358 aa20.35■□□□□ 0.85
LSP1-204ENST00000406638 AKAP12Q02952 1782 aa20.35■□□□□ 0.85
LSP1-204ENST00000406638 PLEKHG5O94827 1062 aa20.35■□□□□ 0.85
LSP1-204ENST00000406638 ITSN1Q15811 1721 aa20.34■□□□□ 0.85
LSP1-204ENST00000406638 CHD2O14647 1828 aaKnown RBP20.34■□□□□ 0.85
LSP1-204ENST00000406638 PNPLA6Q8IY17 1366 aa20.34■□□□□ 0.85
LSP1-204ENST00000406638 PLEKHF1Q96S99 279 aa20.33■□□□□ 0.85
LSP1-204ENST00000406638 MAP2P11137 1827 aaKnown RBP20.32■□□□□ 0.84
LSP1-204ENST00000406638 XPCQ01831 940 aaPredicted RBP20.32■□□□□ 0.84
LSP1-204ENST00000406638 IQSEC2Q5JU85 1478 aa20.32■□□□□ 0.84
LSP1-204ENST00000406638 NALCNQ8IZF0 1738 aa20.32■□□□□ 0.84
LSP1-204ENST00000406638 HSCBQ8IWL3 235 aa20.31■□□□□ 0.84
LSP1-204ENST00000406638 RBM10P98175 930 aaKnown RBP20.31■□□□□ 0.84
LSP1-204ENST00000406638 RWDD1Q9H446 243 aaPredicted RBP20.31■□□□□ 0.84
LSP1-204ENST00000406638 SSH2Q76I76 1423 aa20.3■□□□□ 0.84
LSP1-204ENST00000406638 RARSP54136 660 aaKnown RBP20.3■□□□□ 0.84
LSP1-204ENST00000406638 ISY1Q9ULR0 285 aaKnown RBP20.3■□□□□ 0.84
LSP1-204ENST00000406638 TNPO1Q92973 898 aaKnown RBP20.29■□□□□ 0.84
LSP1-204ENST00000406638 ORAI2Q96SN7 254 aa20.29■□□□□ 0.84
LSP1-204ENST00000406638 NRKQ7Z2Y5 1582 aa20.29■□□□□ 0.84
LSP1-204ENST00000406638 ESCO1Q5FWF5 840 aa20.29■□□□□ 0.84
LSP1-204ENST00000406638 IL13P35225 146 aa20.28■□□□□ 0.84
LSP1-204ENST00000406638 PROSER2Q86WR7 435 aaPredicted RBP20.28■□□□□ 0.84
LSP1-204ENST00000406638 PHACTR3Q96KR7 559 aa20.28■□□□□ 0.84
LSP1-204ENST00000406638 PRKAR2BP31323 418 aa20.28■□□□□ 0.84
LSP1-204ENST00000406638 HSP90AB2PQ58FF8 381 aa20.28■□□□□ 0.84
LSP1-204ENST00000406638 OVOS2A0A0J9YW53 1432 aa20.27■□□□□ 0.84
LSP1-204ENST00000406638 OVOS2Q6IE36 1432 aa20.27■□□□□ 0.84
LSP1-204ENST00000406638 PODXL2Q9NZ53 605 aa20.26■□□□□ 0.83
LSP1-204ENST00000406638 PHF8Q9UPP1 1060 aa20.26■□□□□ 0.83
LSP1-204ENST00000406638 TMPOP42166 694 aaKnown RBP20.25■□□□□ 0.83
LSP1-204ENST00000406638 AEBP1Q8IUX7 1158 aa20.25■□□□□ 0.83
LSP1-204ENST00000406638 NLRP6P59044 892 aa20.25■□□□□ 0.83
LSP1-204ENST00000406638 PHF23Q9BUL5 403 aaPredicted RBP20.25■□□□□ 0.83
LSP1-204ENST00000406638 FMN2Q9NZ56 1722 aa20.25■□□□□ 0.83
LSP1-204ENST00000406638 TRIM35Q9UPQ4 493 aa20.24■□□□□ 0.83
LSP1-204ENST00000406638 ADGRL3Q9HAR2 1447 aa20.24■□□□□ 0.83
LSP1-204ENST00000406638 AATKQ6ZMQ8 1374 aa20.24■□□□□ 0.83
LSP1-204ENST00000406638 FOXD4L1Q9NU39 408 aa20.24■□□□□ 0.83
LSP1-204ENST00000406638 FOXO3O43524 673 aa20.23■□□□□ 0.83
LSP1-204ENST00000406638 TSR2Q969E8 191 aaKnown RBP20.23■□□□□ 0.83
LSP1-204ENST00000406638 THUMPD2Q9BTF0 503 aaKnown RBP20.23■□□□□ 0.83
LSP1-204ENST00000406638 MAP3K19Q56UN5 1328 aa20.23■□□□□ 0.83
LSP1-204ENST00000406638 DDIT3P35638 169 aa20.23■□□□□ 0.83
LSP1-204ENST00000406638 EIF4A2Q14240 407 aaKnown RBP20.23■□□□□ 0.83
LSP1-204ENST00000406638 LRRC7Q96NW7 1537 aa20.22■□□□□ 0.83
LSP1-204ENST00000406638 ABTB2Q8N961 1025 aa20.22■□□□□ 0.83
LSP1-204ENST00000406638 ANKARQ7Z5J8 1434 aa20.22■□□□□ 0.83
LSP1-204ENST00000406638 RIPK4P57078 832 aa20.22■□□□□ 0.83
LSP1-204ENST00000406638 DDX17Q92841 729 aaKnown RBP20.22■□□□□ 0.83
LSP1-204ENST00000406638 FAM13BQ9NYF5 915 aa20.22■□□□□ 0.83
LSP1-204ENST00000406638 ZSCAN30Q86W11 494 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms