RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 CWC22Q9HCG8 908 aaKnown RBP16.9■□□□□ 0.3
DUSP28-202ENST00000405954 CCDC141Q6ZP82 1450 aa16.9■□□□□ 0.3
DUSP28-202ENST00000405954 FAM184AQ8NB25 1140 aa16.9■□□□□ 0.3
DUSP28-202ENST00000405954 ZMYM4Q5VZL5 1548 aa16.89■□□□□ 0.29
DUSP28-202ENST00000405954 TBC1D9Q6ZT07 1266 aa16.89■□□□□ 0.29
DUSP28-202ENST00000405954 CHD1LQ86WJ1 897 aa16.89■□□□□ 0.29
DUSP28-202ENST00000405954 CDC45O75419 566 aa16.89■□□□□ 0.29
DUSP28-202ENST00000405954 RGS22Q8NE09 1264 aa16.89■□□□□ 0.29
DUSP28-202ENST00000405954 COL17A1Q9UMD9 1497 aaPredicted RBP16.88■□□□□ 0.29
DUSP28-202ENST00000405954 GPS2Q13227 327 aa16.88■□□□□ 0.29
DUSP28-202ENST00000405954 TRPM1Q7Z4N2 1603 aa16.88■□□□□ 0.29
DUSP28-202ENST00000405954 ARHGEF12Q9NZN5 1544 aa16.88■□□□□ 0.29
DUSP28-202ENST00000405954 FKBP5Q13451 457 aaPredicted RBP16.88■□□□□ 0.29
DUSP28-202ENST00000405954 TERF2Q15554 542 aa16.88■□□□□ 0.29
DUSP28-202ENST00000405954 C1orf115Q9H7X2 142 aa16.88■□□□□ 0.29
DUSP28-202ENST00000405954 BLMP54132 1417 aaPredicted RBP16.87■□□□□ 0.29
DUSP28-202ENST00000405954 NAA30Q147X3 362 aaPredicted RBP16.87■□□□□ 0.29
DUSP28-202ENST00000405954 NSFL1CQ9UNZ2 370 aaKnown RBP16.87■□□□□ 0.29
DUSP28-202ENST00000405954 U2AF1L5P0DN76 240 aaPredicted RBP16.87■□□□□ 0.29
DUSP28-202ENST00000405954 NEK4P51957 841 aa16.87■□□□□ 0.29
DUSP28-202ENST00000405954 U2AF1Q01081 240 aaKnown RBP eCLIP16.87■□□□□ 0.29
DUSP28-202ENST00000405954 TCP11L2Q8N4U5 519 aa16.87■□□□□ 0.29
DUSP28-202ENST00000405954 ABCA8O94911 1581 aa16.86■□□□□ 0.29
DUSP28-202ENST00000405954 E9PCH4 1651 aa16.86■□□□□ 0.29
DUSP28-202ENST00000405954 IPO8O15397 1037 aaKnown RBP16.86■□□□□ 0.29
DUSP28-202ENST00000405954 RASSF4Q9H2L5 321 aa16.86■□□□□ 0.29
DUSP28-202ENST00000405954 GTF3C6Q969F1 213 aa16.86■□□□□ 0.29
DUSP28-202ENST00000405954 TPM3P06753 285 aa16.86■□□□□ 0.29
DUSP28-202ENST00000405954 TSR2Q969E8 191 aaKnown RBP16.86■□□□□ 0.29
DUSP28-202ENST00000405954 ADCY10Q96PN6 1610 aa16.86■□□□□ 0.29
DUSP28-202ENST00000405954 GOLGA6L4A6NEF3 574 aa16.85■□□□□ 0.29
DUSP28-202ENST00000405954 TRIM5Q9C035 493 aa16.85■□□□□ 0.29
DUSP28-202ENST00000405954 ERCC6L2Q5T890 1561 aa16.85■□□□□ 0.29
DUSP28-202ENST00000405954 MORC1Q86VD1 984 aa16.84■□□□□ 0.29
DUSP28-202ENST00000405954 CDC42BPBQ9Y5S2 1711 aa16.84■□□□□ 0.29
DUSP28-202ENST00000405954 HAP1P54257 671 aaPredicted RBP16.84■□□□□ 0.29
DUSP28-202ENST00000405954 TTC37Q6PGP7 1564 aa16.84■□□□□ 0.29
DUSP28-202ENST00000405954 CFAP53Q96M91 514 aa16.84■□□□□ 0.29
DUSP28-202ENST00000405954 NLRP1Q9C000 1473 aa16.84■□□□□ 0.29
DUSP28-202ENST00000405954 FIBPO43427 364 aa16.84■□□□□ 0.29
DUSP28-202ENST00000405954 TRAK1Q9UPV9 953 aa16.84■□□□□ 0.29
DUSP28-202ENST00000405954 KIF3BO15066 747 aa16.83■□□□□ 0.29
DUSP28-202ENST00000405954 TMEM132EQ6IEE7 984 aa16.83■□□□□ 0.29
DUSP28-202ENST00000405954 CHD1O14646 1710 aa16.83■□□□□ 0.28
DUSP28-202ENST00000405954 LOC102724159A0A0B4J2E5 919 aa16.83■□□□□ 0.28
DUSP28-202ENST00000405954 PWP2Q15269 919 aaKnown RBP16.83■□□□□ 0.28
DUSP28-202ENST00000405954 CWC15Q9P013 229 aaKnown RBP16.83■□□□□ 0.28
DUSP28-202ENST00000405954 PYCARDQ9ULZ3 195 aa16.83■□□□□ 0.28
DUSP28-202ENST00000405954 CCDC27Q2M243 656 aa16.83■□□□□ 0.28
DUSP28-202ENST00000405954 GORABQ5T7V8 394 aa16.83■□□□□ 0.28
DUSP28-202ENST00000405954 SLFN14P0C7P3 912 aa16.82■□□□□ 0.28
DUSP28-202ENST00000405954 HNRNPH2P55795 449 aaKnown RBP16.82■□□□□ 0.28
DUSP28-202ENST00000405954 NCBP1Q09161 790 aaKnown RBP16.82■□□□□ 0.28
DUSP28-202ENST00000405954 LMOD3Q0VAK6 560 aa16.82■□□□□ 0.28
DUSP28-202ENST00000405954 CARD14Q9BXL6 1004 aa16.81■□□□□ 0.28
DUSP28-202ENST00000405954 DEF6Q9H4E7 631 aa16.81■□□□□ 0.28
DUSP28-202ENST00000405954 NOM1Q5C9Z4 860 aaKnown RBP16.81■□□□□ 0.28
DUSP28-202ENST00000405954 MYO5CQ9NQX4 1742 aa16.81■□□□□ 0.28
DUSP28-202ENST00000405954 PTGS1P23219 599 aa16.8■□□□□ 0.28
DUSP28-202ENST00000405954 BMP2KLQ5H9B9 411 aa16.8■□□□□ 0.28
DUSP28-202ENST00000405954 TMEM57Q8N5G2 664 aa16.8■□□□□ 0.28
DUSP28-202ENST00000405954 CLGNO14967 610 aa16.8■□□□□ 0.28
DUSP28-202ENST00000405954 DDIT3P35638 169 aa16.8■□□□□ 0.28
DUSP28-202ENST00000405954 SKIDA1Q1XH10 827 aa16.8■□□□□ 0.28
DUSP28-202ENST00000405954 CTNNA3Q9UI47 895 aa16.8■□□□□ 0.28
DUSP28-202ENST00000405954 NOB1Q9ULX3 412 aaKnown RBP16.8■□□□□ 0.28
DUSP28-202ENST00000405954 MYCNP04198 464 aaPredicted RBP16.8■□□□□ 0.28
DUSP28-202ENST00000405954 NGEFQ8N5V2 710 aa16.8■□□□□ 0.28
DUSP28-202ENST00000405954 ADGRF5Q8IZF2 1346 aa16.8■□□□□ 0.28
DUSP28-202ENST00000405954 SHANK2Q9UPX8 1470 aa16.79■□□□□ 0.28
DUSP28-202ENST00000405954 ZNF397Q8NF99 534 aaPredicted RBP16.79■□□□□ 0.28
DUSP28-202ENST00000405954 DDX41Q9UJV9 622 aaKnown RBP16.79■□□□□ 0.28
DUSP28-202ENST00000405954 NUP160Q12769 1436 aa16.79■□□□□ 0.28
DUSP28-202ENST00000405954 CFAP65Q6ZU64 1925 aaKnown RBP16.79■□□□□ 0.28
DUSP28-202ENST00000405954 EXOSC9Q06265 439 aaKnown RBP16.79■□□□□ 0.28
DUSP28-202ENST00000405954 UVSSAQ2YD98 709 aa16.79■□□□□ 0.28
DUSP28-202ENST00000405954 INTS3Q68E01 1043 aaKnown RBP16.79■□□□□ 0.28
DUSP28-202ENST00000405954 GIMAP6Q6P9H5 292 aa16.79■□□□□ 0.28
DUSP28-202ENST00000405954 NEK11Q8NG66 645 aa16.79■□□□□ 0.28
DUSP28-202ENST00000405954 CFAP44Q96MT7 982 aa16.79■□□□□ 0.28
DUSP28-202ENST00000405954 TRAPPC8Q9Y2L5 1435 aa16.79■□□□□ 0.28
DUSP28-202ENST00000405954 MCCP23508 829 aa16.79■□□□□ 0.28
DUSP28-202ENST00000405954 CCDC186Q7Z3E2 898 aa16.79■□□□□ 0.28
DUSP28-202ENST00000405954 ZNF521Q96K83 1311 aa16.78■□□□□ 0.28
DUSP28-202ENST00000405954 SMTNL1A8MU46 457 aa16.78■□□□□ 0.28
DUSP28-202ENST00000405954 GNL2Q13823 731 aaKnown RBP16.78■□□□□ 0.28
DUSP28-202ENST00000405954 CCDC191Q8NCU4 936 aa16.78■□□□□ 0.28
DUSP28-202ENST00000405954 SLC12A5Q9H2X9 1139 aa16.78■□□□□ 0.28
DUSP28-202ENST00000405954 ST7Q9NRC1 585 aa16.78■□□□□ 0.28
DUSP28-202ENST00000405954 ATF7IPQ6VMQ6 1270 aa16.78■□□□□ 0.28
DUSP28-202ENST00000405954 KRBA2Q6ZNG9 492 aa16.78■□□□□ 0.28
DUSP28-202ENST00000405954 RUNDC1Q96C34 613 aa16.78■□□□□ 0.28
DUSP28-202ENST00000405954 DRC1Q96MC2 740 aa16.78■□□□□ 0.28
DUSP28-202ENST00000405954 TRMT1Q9NXH9 659 aaKnown RBP16.78■□□□□ 0.28
DUSP28-202ENST00000405954 WDR7Q9Y4E6 1490 aa16.78■□□□□ 0.28
DUSP28-202ENST00000405954 UGGT1Q9NYU2 1555 aa16.78■□□□□ 0.28
DUSP28-202ENST00000405954 TRIM27P14373 513 aa16.78■□□□□ 0.28
DUSP28-202ENST00000405954 KIF18AQ8NI77 898 aa16.77■□□□□ 0.28
DUSP28-202ENST00000405954 SPAG9O60271 1321 aaKnown RBP16.77■□□□□ 0.28
DUSP28-202ENST00000405954 KDM4AO75164 1064 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms