RNA–Protein interactions for RNA: ENST00000405755.6

PDE4D-207, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-207ENST00000405755 PHACTR3Q96KR7 559 aa12.29□□□□□ -0.44
PDE4D-207ENST00000405755 PEAK1Q9H792 1746 aa12.29□□□□□ -0.44
PDE4D-207ENST00000405755 MAP3K19Q56UN5 1328 aa12.29□□□□□ -0.44
PDE4D-207ENST00000405755 PSME1Q06323 249 aa12.28□□□□□ -0.44
PDE4D-207ENST00000405755 AMPHP49418 695 aa12.28□□□□□ -0.44
PDE4D-207ENST00000405755 TSR2Q969E8 191 aaKnown RBP12.28□□□□□ -0.44
PDE4D-207ENST00000405755 TSHZ2Q9NRE2 1034 aa12.28□□□□□ -0.44
PDE4D-207ENST00000405755 FLT4P35916 1363 aa12.27□□□□□ -0.44
PDE4D-207ENST00000405755 FANCIQ9NVI1 1328 aa12.27□□□□□ -0.44
PDE4D-207ENST00000405755 NFE2L2Q16236 605 aa12.27□□□□□ -0.44
PDE4D-207ENST00000405755 SBNO1A3KN83 1393 aa12.27□□□□□ -0.45
PDE4D-207ENST00000405755 SULT6B1Q6IMI4 303 aa12.27□□□□□ -0.45
PDE4D-207ENST00000405755 IL16Q14005 1332 aa12.26□□□□□ -0.45
PDE4D-207ENST00000405755 AEBP1Q8IUX7 1158 aa12.26□□□□□ -0.45
PDE4D-207ENST00000405755 FRAT1Q92837 279 aaPredicted RBP12.26□□□□□ -0.45
PDE4D-207ENST00000405755 ORAI2Q96SN7 254 aa12.26□□□□□ -0.45
PDE4D-207ENST00000405755 LAS1LQ9Y4W2 734 aaKnown RBP12.25□□□□□ -0.45
PDE4D-207ENST00000405755 FOXO3O43524 673 aa12.25□□□□□ -0.45
PDE4D-207ENST00000405755 RARSP54136 660 aaKnown RBP12.25□□□□□ -0.45
PDE4D-207ENST00000405755 BCL2L13Q9BXK5 485 aa12.25□□□□□ -0.45
PDE4D-207ENST00000405755 C19orf44Q9H6X5 657 aa12.25□□□□□ -0.45
PDE4D-207ENST00000405755 MARF1Q9Y4F3 1742 aaKnown RBP12.24□□□□□ -0.45
PDE4D-207ENST00000405755 XPCQ01831 940 aaPredicted RBP12.24□□□□□ -0.45
PDE4D-207ENST00000405755 EXOSC9Q06265 439 aaKnown RBP12.24□□□□□ -0.45
PDE4D-207ENST00000405755 LMOD3Q0VAK6 560 aa12.24□□□□□ -0.45
PDE4D-207ENST00000405755 USP54Q70EL1 1684 aa12.24□□□□□ -0.45
PDE4D-207ENST00000405755 CALD1Q05682 793 aaKnown RBP12.23□□□□□ -0.45
PDE4D-207ENST00000405755 TMEM94Q12767 1356 aa12.23□□□□□ -0.45
PDE4D-207ENST00000405755 ATF3P18847 181 aa12.23□□□□□ -0.45
PDE4D-207ENST00000405755 LMOD2Q6P5Q4 547 aa12.23□□□□□ -0.45
PDE4D-207ENST00000405755 THUMPD2Q9BTF0 503 aaKnown RBP12.23□□□□□ -0.45
PDE4D-207ENST00000405755 LTBP4Q8N2S1 1624 aa12.22□□□□□ -0.45
PDE4D-207ENST00000405755 RGPD1P0DJD0 1748 aa12.22□□□□□ -0.45
PDE4D-207ENST00000405755 DLG5Q8TDM6 1919 aa12.22□□□□□ -0.45
PDE4D-207ENST00000405755 PLEKHG5O94827 1062 aa12.22□□□□□ -0.45
PDE4D-207ENST00000405755 CT47B1P0C2W7 299 aaPredicted RBP12.22□□□□□ -0.45
PDE4D-207ENST00000405755 STRCP1A6NGW2 1772 aa12.22□□□□□ -0.45
PDE4D-207ENST00000405755 ARHGEF10O15013 1369 aa12.22□□□□□ -0.45
PDE4D-207ENST00000405755 ZBTB7CA1YPR0 619 aa12.21□□□□□ -0.45
PDE4D-207ENST00000405755 HOXC9P31274 260 aa12.21□□□□□ -0.45
PDE4D-207ENST00000405755 C1orf167Q5SNV9 1468 aa12.21□□□□□ -0.46
PDE4D-207ENST00000405755 KIF24Q5T7B8 1368 aa12.21□□□□□ -0.46
PDE4D-207ENST00000405755 LTN1O94822 1766 aa12.21□□□□□ -0.46
PDE4D-207ENST00000405755 KIF1AQ12756 1690 aa12.2□□□□□ -0.46
PDE4D-207ENST00000405755 FAM83GA6ND36 823 aa12.2□□□□□ -0.46
PDE4D-207ENST00000405755 PDE3AQ14432 1141 aa12.2□□□□□ -0.46
PDE4D-207ENST00000405755 LTV1Q96GA3 475 aaPredicted RBP12.2□□□□□ -0.46
PDE4D-207ENST00000405755 SMC4Q9NTJ3 1288 aa12.2□□□□□ -0.46
PDE4D-207ENST00000405755 GNAI1P63096 354 aa12.2□□□□□ -0.46
PDE4D-207ENST00000405755 PANK1Q8TE04 598 aa12.2□□□□□ -0.46
PDE4D-207ENST00000405755 DCTN1Q14203 1278 aa12.19□□□□□ -0.46
PDE4D-207ENST00000405755 KCNH5Q8NCM2 988 aa12.19□□□□□ -0.46
PDE4D-207ENST00000405755 EYA1Q99502 592 aa12.19□□□□□ -0.46
PDE4D-207ENST00000405755 IFT57Q9NWB7 429 aa12.19□□□□□ -0.46
PDE4D-207ENST00000405755 RTL1A6NKG5 1358 aa12.19□□□□□ -0.46
PDE4D-207ENST00000405755 KRT28Q7Z3Y7 464 aa12.18□□□□□ -0.46
PDE4D-207ENST00000405755 COG6Q9Y2V7 657 aa12.18□□□□□ -0.46
PDE4D-207ENST00000405755 IGSF1Q8N6C5 1336 aa12.18□□□□□ -0.46
PDE4D-207ENST00000405755 DCCP43146 1447 aa12.18□□□□□ -0.46
PDE4D-207ENST00000405755 MSH6P52701 1360 aa12.18□□□□□ -0.46
PDE4D-207ENST00000405755 MST1RQ04912 1400 aa12.18□□□□□ -0.46
PDE4D-207ENST00000405755 NFAT5O94916 1531 aa12.17□□□□□ -0.46
PDE4D-207ENST00000405755 CADPS2Q86UW7 1296 aa12.17□□□□□ -0.46
PDE4D-207ENST00000405755 CLUAP1Q96AJ1 413 aa12.17□□□□□ -0.46
PDE4D-207ENST00000405755 KDRP35968 1356 aa12.17□□□□□ -0.46
PDE4D-207ENST00000405755 NCOA3Q9Y6Q9 1424 aa12.17□□□□□ -0.46
PDE4D-207ENST00000405755 FTSJ3Q8IY81 847 aaKnown RBP12.17□□□□□ -0.46
PDE4D-207ENST00000405755 SSH1Q8WYL5 1049 aa12.17□□□□□ -0.46
PDE4D-207ENST00000405755 CFAP44Q96MT7 982 aa12.17□□□□□ -0.46
PDE4D-207ENST00000405755 MBIPQ9NS73 344 aa12.17□□□□□ -0.46
PDE4D-207ENST00000405755 ZKSCAN2Q63HK3 967 aa12.16□□□□□ -0.46
PDE4D-207ENST00000405755 MCM10Q7L590 875 aa12.16□□□□□ -0.46
PDE4D-207ENST00000405755 RTF1Q92541 710 aaKnown RBP12.16□□□□□ -0.46
PDE4D-207ENST00000405755 TNNQ9UQP3 1299 aa12.16□□□□□ -0.46
PDE4D-207ENST00000405755 TRPM3Q9HCF6 1732 aaPredicted RBP12.15□□□□□ -0.46
PDE4D-207ENST00000405755 GCP02774 474 aa12.15□□□□□ -0.46
PDE4D-207ENST00000405755 MTHFSDQ2M296 383 aaKnown RBP12.15□□□□□ -0.46
PDE4D-207ENST00000405755 IP6K1Q92551 441 aa12.15□□□□□ -0.46
PDE4D-207ENST00000405755 RBM19Q9Y4C8 960 aaKnown RBP12.15□□□□□ -0.46
PDE4D-207ENST00000405755 ZNF335Q9H4Z2 1342 aaPredicted RBP12.15□□□□□ -0.46
PDE4D-207ENST00000405755 KIF16BQ96L93 1317 aa12.14□□□□□ -0.47
PDE4D-207ENST00000405755 ELL2O00472 640 aaPredicted RBP12.14□□□□□ -0.47
PDE4D-207ENST00000405755 ZNF853P0CG23 659 aa12.14□□□□□ -0.47
PDE4D-207ENST00000405755 MS4A1P11836 297 aa12.14□□□□□ -0.47
PDE4D-207ENST00000405755 RLBP1P12271 317 aa12.14□□□□□ -0.47
PDE4D-207ENST00000405755 USHBP1Q8N6Y0 703 aa12.14□□□□□ -0.47
PDE4D-207ENST00000405755 GAS2L2Q8NHY3 880 aa12.14□□□□□ -0.47
PDE4D-207ENST00000405755 DDX17Q92841 729 aaKnown RBP12.14□□□□□ -0.47
PDE4D-207ENST00000405755 UBAP1LF5GYI3 381 aa12.13□□□□□ -0.47
PDE4D-207ENST00000405755 ALDH1L2Q3SY69 923 aa12.13□□□□□ -0.47
PDE4D-207ENST00000405755 CENPQQ7L2Z9 268 aaPredicted RBP12.13□□□□□ -0.47
PDE4D-207ENST00000405755 DZIP1LQ8IYY4 767 aaKnown RBP12.13□□□□□ -0.47
PDE4D-207ENST00000405755 SLIT3O75094 1523 aa12.13□□□□□ -0.47
PDE4D-207ENST00000405755 TWISTNBQ3B726 338 aaPredicted RBP12.13□□□□□ -0.47
PDE4D-207ENST00000405755 ZNF428Q96B54 188 aa12.13□□□□□ -0.47
PDE4D-207ENST00000405755 NOB1Q9ULX3 412 aaKnown RBP12.13□□□□□ -0.47
PDE4D-207ENST00000405755 NPHP3Q7Z494 1330 aa12.12□□□□□ -0.47
PDE4D-207ENST00000405755 TRIM27P14373 513 aa12.12□□□□□ -0.47
PDE4D-207ENST00000405755 TSPYL6Q8N831 410 aa12.12□□□□□ -0.47
PDE4D-207ENST00000405755 USP19O94966 1318 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms