RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 HDGFP51858 240 aaKnown RBP18.71■□□□□ 0.59
ATG4B-206ENST00000405546 C8orf58Q8NAV2 365 aa18.71■□□□□ 0.59
ATG4B-206ENST00000405546 VAMP4O75379 141 aa18.7■□□□□ 0.58
ATG4B-206ENST00000405546 NCLP19338 710 aaKnown RBP18.7■□□□□ 0.58
ATG4B-206ENST00000405546 AEBP1Q8IUX7 1158 aa18.7■□□□□ 0.58
ATG4B-206ENST00000405546 DIP2CQ9Y2E4 1556 aa18.7■□□□□ 0.58
ATG4B-206ENST00000405546 MYO3AQ8NEV4 1616 aa18.7■□□□□ 0.58
ATG4B-206ENST00000405546 HDAC1Q13547 482 aaPredicted RBP18.7■□□□□ 0.58
ATG4B-206ENST00000405546 KRT24Q2M2I5 525 aa18.7■□□□□ 0.58
ATG4B-206ENST00000405546 CHD1LQ86WJ1 897 aa18.7■□□□□ 0.58
ATG4B-206ENST00000405546 SIGLEC1Q9BZZ2 1709 aa18.7■□□□□ 0.58
ATG4B-206ENST00000405546 IL16Q14005 1332 aa18.7■□□□□ 0.58
ATG4B-206ENST00000405546 MIS18AQ9NYP9 233 aa18.69■□□□□ 0.58
ATG4B-206ENST00000405546 RIMS2Q9UQ26 1411 aa18.69■□□□□ 0.58
ATG4B-206ENST00000405546 C14orf37Q86TY3 774 aa18.69■□□□□ 0.58
ATG4B-206ENST00000405546 SHPRHQ149N8 1683 aa18.69■□□□□ 0.58
ATG4B-206ENST00000405546 ARHGAP31Q2M1Z3 1444 aa18.69■□□□□ 0.58
ATG4B-206ENST00000405546 MCM10Q7L590 875 aa18.69■□□□□ 0.58
ATG4B-206ENST00000405546 PPIP5K1Q6PFW1 1433 aa18.68■□□□□ 0.58
ATG4B-206ENST00000405546 PIK3C2BO00750 1634 aa18.68■□□□□ 0.58
ATG4B-206ENST00000405546 CEBPAP49715 358 aaPredicted RBP18.68■□□□□ 0.58
ATG4B-206ENST00000405546 ALDH1L2Q3SY69 923 aa18.68■□□□□ 0.58
ATG4B-206ENST00000405546 HSP90AB1P08238 724 aaKnown RBP18.67■□□□□ 0.58
ATG4B-206ENST00000405546 PTPRMP28827 1452 aa18.67■□□□□ 0.58
ATG4B-206ENST00000405546 IL13P35225 146 aa18.67■□□□□ 0.58
ATG4B-206ENST00000405546 SLC4A10Q6U841 1118 aa18.67■□□□□ 0.58
ATG4B-206ENST00000405546 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.67■□□□□ 0.58
ATG4B-206ENST00000405546 SMC5Q8IY18 1101 aa18.66■□□□□ 0.58
ATG4B-206ENST00000405546 NUTM2GQ5VZR2 741 aa18.66■□□□□ 0.58
ATG4B-206ENST00000405546 TNPO1Q92973 898 aaKnown RBP18.66■□□□□ 0.58
ATG4B-206ENST00000405546 METP08581 1390 aa18.66■□□□□ 0.58
ATG4B-206ENST00000405546 LMOD3Q0VAK6 560 aa18.66■□□□□ 0.58
ATG4B-206ENST00000405546 MRPL50Q8N5N7 158 aaKnown RBP18.65■□□□□ 0.58
ATG4B-206ENST00000405546 NLRP1Q9C000 1473 aa18.65■□□□□ 0.58
ATG4B-206ENST00000405546 R3HCC1Q9Y3T6 440 aaKnown RBP18.64■□□□□ 0.58
ATG4B-206ENST00000405546 ZFYVE9O95405 1425 aa18.64■□□□□ 0.57
ATG4B-206ENST00000405546 ARHGEF28Q8N1W1 1705 aaKnown RBP18.64■□□□□ 0.57
ATG4B-206ENST00000405546 HSP90AB2PQ58FF8 381 aa18.64■□□□□ 0.57
ATG4B-206ENST00000405546 NECTIN2Q92692 538 aa18.64■□□□□ 0.57
ATG4B-206ENST00000405546 ZBTB7BO15156 539 aaPredicted RBP18.64■□□□□ 0.57
ATG4B-206ENST00000405546 NUCB1Q02818 461 aa18.64■□□□□ 0.57
ATG4B-206ENST00000405546 CHMP4BQ9H444 224 aaKnown RBP18.64■□□□□ 0.57
ATG4B-206ENST00000405546 PRDM10Q9NQV6 1147 aa18.64■□□□□ 0.57
ATG4B-206ENST00000405546 NGDNQ8NEJ9 315 aaKnown RBP18.63■□□□□ 0.57
ATG4B-206ENST00000405546 LTV1Q96GA3 475 aaPredicted RBP18.63■□□□□ 0.57
ATG4B-206ENST00000405546 IFT57Q9NWB7 429 aa18.63■□□□□ 0.57
ATG4B-206ENST00000405546 RBM42Q9BTD8 480 aaKnown RBP18.63■□□□□ 0.57
ATG4B-206ENST00000405546 PODXL2Q9NZ53 605 aa18.63■□□□□ 0.57
ATG4B-206ENST00000405546 ZC3H13Q5T200 1668 aaKnown RBP18.63■□□□□ 0.57
ATG4B-206ENST00000405546 TSPOAP1O95153 1857 aa18.63■□□□□ 0.57
ATG4B-206ENST00000405546 NCBP3Q53F19 620 aaKnown RBP18.62■□□□□ 0.57
ATG4B-206ENST00000405546 CFAP44Q96MT7 982 aa18.62■□□□□ 0.57
ATG4B-206ENST00000405546 CD163L1Q9NR16 1453 aa18.62■□□□□ 0.57
ATG4B-206ENST00000405546 MPNDQ8N594 471 aa18.61■□□□□ 0.57
ATG4B-206ENST00000405546 ALKQ9UM73 1620 aa18.61■□□□□ 0.57
ATG4B-206ENST00000405546 RTF1Q92541 710 aaKnown RBP18.61■□□□□ 0.57
ATG4B-206ENST00000405546 API5Q9BZZ5 524 aaKnown RBP18.61■□□□□ 0.57
ATG4B-206ENST00000405546 TPRNQ4KMQ1 711 aa18.6■□□□□ 0.57
ATG4B-206ENST00000405546 AMPHP49418 695 aa18.6■□□□□ 0.57
ATG4B-206ENST00000405546 ZNF692Q9BU19 519 aaPredicted RBP18.6■□□□□ 0.57
ATG4B-206ENST00000405546 ACEP12821 1306 aa18.6■□□□□ 0.57
ATG4B-206ENST00000405546 MYO5BQ9ULV0 1848 aa18.6■□□□□ 0.57
ATG4B-206ENST00000405546 DDX11L8A8MPP1 907 aa18.59■□□□□ 0.57
ATG4B-206ENST00000405546 EIF4A2Q14240 407 aaKnown RBP18.59■□□□□ 0.57
ATG4B-206ENST00000405546 ZMYM3Q14202 1370 aa18.59■□□□□ 0.57
ATG4B-206ENST00000405546 CD2BP2O95400 341 aaKnown RBP18.59■□□□□ 0.57
ATG4B-206ENST00000405546 PNPLA6Q8IY17 1366 aa18.58■□□□□ 0.57
ATG4B-206ENST00000405546 MSNP26038 577 aaKnown RBP18.58■□□□□ 0.56
ATG4B-206ENST00000405546 XPCQ01831 940 aaPredicted RBP18.58■□□□□ 0.56
ATG4B-206ENST00000405546 C16orf71Q8IYS4 520 aaPredicted RBP18.58■□□□□ 0.56
ATG4B-206ENST00000405546 GCC1Q96CN9 775 aa18.58■□□□□ 0.56
ATG4B-206ENST00000405546 ARHGEF40Q8TER5 1519 aa18.58■□□□□ 0.56
ATG4B-206ENST00000405546 FOXO3O43524 673 aa18.57■□□□□ 0.56
ATG4B-206ENST00000405546 SLC4A2P04920 1241 aa18.57■□□□□ 0.56
ATG4B-206ENST00000405546 SSFA2P28290 1259 aa18.57■□□□□ 0.56
ATG4B-206ENST00000405546 ZNF428Q96B54 188 aa18.57■□□□□ 0.56
ATG4B-206ENST00000405546 NASPP49321 788 aaPredicted RBP18.57■□□□□ 0.56
ATG4B-206ENST00000405546 FOXD4L5Q5VV16 416 aaPredicted RBP18.57■□□□□ 0.56
ATG4B-206ENST00000405546 FOXD4L4Q8WXT5 416 aaPredicted RBP18.57■□□□□ 0.56
ATG4B-206ENST00000405546 SMARCA5O60264 1052 aaPredicted RBP18.56■□□□□ 0.56
ATG4B-206ENST00000405546 CHAMP1Q96JM3 812 aa18.56■□□□□ 0.56
ATG4B-206ENST00000405546 DDX49Q9Y6V7 483 aaKnown RBP18.56■□□□□ 0.56
ATG4B-206ENST00000405546 PRR36Q9H6K5 1346 aa18.56■□□□□ 0.56
ATG4B-206ENST00000405546 EID1Q9Y6B2 187 aa18.55■□□□□ 0.56
ATG4B-206ENST00000405546 PPP6R1Q9UPN7 881 aa18.55■□□□□ 0.56
ATG4B-206ENST00000405546 A2ML1A8K2U0 1454 aa18.55■□□□□ 0.56
ATG4B-206ENST00000405546 TMEM131LA2VDJ0 1609 aa18.55■□□□□ 0.56
ATG4B-206ENST00000405546 SIRT2Q8IXJ6 389 aa18.55■□□□□ 0.56
ATG4B-206ENST00000405546 TSPYL4Q9UJ04 414 aa18.55■□□□□ 0.56
ATG4B-206ENST00000405546 COL3A1P02461 1466 aaPredicted RBP18.55■□□□□ 0.56
ATG4B-206ENST00000405546 TTC21BQ7Z4L5 1316 aa18.54■□□□□ 0.56
ATG4B-206ENST00000405546 F6X3S4 739 aa18.54■□□□□ 0.56
ATG4B-206ENST00000405546 TBC1D9Q6ZT07 1266 aa18.54■□□□□ 0.56
ATG4B-206ENST00000405546 ANP32BQ92688 251 aaKnown RBP18.54■□□□□ 0.56
ATG4B-206ENST00000405546 ZHX1Q9UKY1 873 aaPredicted RBP18.54■□□□□ 0.56
ATG4B-206ENST00000405546 EDC4Q6P2E9 1401 aaKnown RBP18.53■□□□□ 0.56
ATG4B-206ENST00000405546 PDCL3Q9H2J4 239 aa18.53■□□□□ 0.56
ATG4B-206ENST00000405546 LRRC7Q96NW7 1537 aa18.53■□□□□ 0.56
ATG4B-206ENST00000405546 FAM135BQ49AJ0 1406 aa18.53■□□□□ 0.56
ATG4B-206ENST00000405546 ARHGAP45Q92619 1136 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms