RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 TMEM63CQ9P1W3 806 aa11.78□□□□□ -0.52
SMC1B-202ENST00000404354 ZRANB1Q9UGI0 708 aa11.78□□□□□ -0.52
SMC1B-202ENST00000404354 MRPL50Q8N5N7 158 aaKnown RBP11.78□□□□□ -0.52
SMC1B-202ENST00000404354 PRAM1Q96QH2 718 aa11.78□□□□□ -0.52
SMC1B-202ENST00000404354 EMILIN1Q9Y6C2 1016 aa11.78□□□□□ -0.52
SMC1B-202ENST00000404354 CT47B1P0C2W7 299 aaPredicted RBP11.78□□□□□ -0.52
SMC1B-202ENST00000404354 C17orf53Q8N3J3 647 aaPredicted RBP11.78□□□□□ -0.52
SMC1B-202ENST00000404354 MBIPQ9NS73 344 aa11.78□□□□□ -0.52
SMC1B-202ENST00000404354 ABCA6Q8N139 1617 aa11.78□□□□□ -0.52
SMC1B-202ENST00000404354 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.77□□□□□ -0.52
SMC1B-202ENST00000404354 LARP6Q9BRS8 491 aaKnown RBP11.77□□□□□ -0.52
SMC1B-202ENST00000404354 SPHKAPQ2M3C7 1700 aa11.77□□□□□ -0.53
SMC1B-202ENST00000404354 SLC4A10Q6U841 1118 aa11.77□□□□□ -0.53
SMC1B-202ENST00000404354 SDSP20132 328 aa11.77□□□□□ -0.53
SMC1B-202ENST00000404354 NEK4P51957 841 aa11.77□□□□□ -0.53
SMC1B-202ENST00000404354 BCL11BQ9C0K0 894 aaPredicted RBP11.77□□□□□ -0.53
SMC1B-202ENST00000404354 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.77□□□□□ -0.53
SMC1B-202ENST00000404354 ZMYM3Q14202 1370 aa11.76□□□□□ -0.53
SMC1B-202ENST00000404354 MIS18AQ9NYP9 233 aa11.76□□□□□ -0.53
SMC1B-202ENST00000404354 USP26Q9BXU7 913 aa11.76□□□□□ -0.53
SMC1B-202ENST00000404354 ZDHHC9Q9Y397 364 aa11.76□□□□□ -0.53
SMC1B-202ENST00000404354 RRS1Q15050 365 aaKnown RBP11.75□□□□□ -0.53
SMC1B-202ENST00000404354 RABEP1Q15276 862 aa11.75□□□□□ -0.53
SMC1B-202ENST00000404354 ANKRD36BQ8N2N9 1353 aa11.75□□□□□ -0.53
SMC1B-202ENST00000404354 NUCB2P80303 420 aa11.75□□□□□ -0.53
SMC1B-202ENST00000404354 ZHX1Q9UKY1 873 aaPredicted RBP11.75□□□□□ -0.53
SMC1B-202ENST00000404354 ABCC11Q96J66 1382 aa11.74□□□□□ -0.53
SMC1B-202ENST00000404354 UPF3BQ9BZI7 483 aaKnown RBP11.74□□□□□ -0.53
SMC1B-202ENST00000404354 TERF2IPQ9NYB0 399 aa11.74□□□□□ -0.53
SMC1B-202ENST00000404354 ALDH1L2Q3SY69 923 aa11.74□□□□□ -0.53
SMC1B-202ENST00000404354 TTC22Q5TAA0 569 aa11.74□□□□□ -0.53
SMC1B-202ENST00000404354 ST18O60284 1047 aa11.73□□□□□ -0.53
SMC1B-202ENST00000404354 NECTIN2Q92692 538 aa11.73□□□□□ -0.53
SMC1B-202ENST00000404354 MAP3K4Q9Y6R4 1608 aa11.73□□□□□ -0.53
SMC1B-202ENST00000404354 NCKAP5LQ9HCH0 1330 aa11.73□□□□□ -0.53
SMC1B-202ENST00000404354 PTMSP20962 102 aa11.73□□□□□ -0.53
SMC1B-202ENST00000404354 WAPLQ7Z5K2 1190 aa11.73□□□□□ -0.53
SMC1B-202ENST00000404354 MEIS3Q99687 375 aa11.73□□□□□ -0.53
SMC1B-202ENST00000404354 NOL7Q9UMY1 257 aaKnown RBP11.73□□□□□ -0.53
SMC1B-202ENST00000404354 NUTM2FA1L443 756 aa11.72□□□□□ -0.53
SMC1B-202ENST00000404354 F6X3S4 739 aa11.72□□□□□ -0.53
SMC1B-202ENST00000404354 ZNF445P59923 1031 aa11.72□□□□□ -0.53
SMC1B-202ENST00000404354 INTS3Q68E01 1043 aaKnown RBP11.72□□□□□ -0.53
SMC1B-202ENST00000404354 RILPL2Q969X0 211 aa11.72□□□□□ -0.53
SMC1B-202ENST00000404354 POLKQ9UBT6 870 aa11.72□□□□□ -0.53
SMC1B-202ENST00000404354 HDGFL2Q7Z4V5 671 aaPredicted RBP11.72□□□□□ -0.53
SMC1B-202ENST00000404354 CDK19Q9BWU1 502 aa11.72□□□□□ -0.53
SMC1B-202ENST00000404354 EXOC6BQ9Y2D4 811 aa11.72□□□□□ -0.53
SMC1B-202ENST00000404354 GADD45BO75293 160 aaPredicted RBP11.71□□□□□ -0.53
SMC1B-202ENST00000404354 FCHSD2O94868 740 aa11.71□□□□□ -0.53
SMC1B-202ENST00000404354 NFE2L2Q16236 605 aa11.71□□□□□ -0.53
SMC1B-202ENST00000404354 ZKSCAN5Q9Y2L8 839 aa11.71□□□□□ -0.53
SMC1B-202ENST00000404354 TRIM6-TRIM34B2RNG4 842 aa11.71□□□□□ -0.54
SMC1B-202ENST00000404354 VGFO15240 615 aaPredicted RBP11.71□□□□□ -0.54
SMC1B-202ENST00000404354 MCM10Q7L590 875 aa11.71□□□□□ -0.54
SMC1B-202ENST00000404354 IDI1Q13907 227 aa11.71□□□□□ -0.54
SMC1B-202ENST00000404354 TTC12Q9H892 705 aaPredicted RBP11.71□□□□□ -0.54
SMC1B-202ENST00000404354 GNAI1P63096 354 aa11.7□□□□□ -0.54
SMC1B-202ENST00000404354 NME9Q86XW9 330 aa11.7□□□□□ -0.54
SMC1B-202ENST00000404354 ABCC1P33527 1531 aa11.7□□□□□ -0.54
SMC1B-202ENST00000404354 SBNO2Q9Y2G9 1366 aa11.7□□□□□ -0.54
SMC1B-202ENST00000404354 MAP4K4O95819 1239 aaPredicted RBP11.7□□□□□ -0.54
SMC1B-202ENST00000404354 CASC1Q6TDU7 716 aa11.7□□□□□ -0.54
SMC1B-202ENST00000404354 ANO2Q9NQ90 1003 aa11.7□□□□□ -0.54
SMC1B-202ENST00000404354 IL16Q14005 1332 aa11.7□□□□□ -0.54
SMC1B-202ENST00000404354 A0A0U1RQG5 324 aaPredicted RBP11.69□□□□□ -0.54
SMC1B-202ENST00000404354 TMX3Q96JJ7 454 aa11.69□□□□□ -0.54
SMC1B-202ENST00000404354 DCTPP1Q9H773 170 aa11.69□□□□□ -0.54
SMC1B-202ENST00000404354 USP25Q9UHP3 1055 aa11.69□□□□□ -0.54
SMC1B-202ENST00000404354 STAG3Q9UJ98 1225 aa11.69□□□□□ -0.54
SMC1B-202ENST00000404354 PALD1Q9ULE6 856 aa11.69□□□□□ -0.54
SMC1B-202ENST00000404354 RAPGEF3O95398 923 aa11.69□□□□□ -0.54
SMC1B-202ENST00000404354 LRSAM1Q6UWE0 723 aa11.69□□□□□ -0.54
SMC1B-202ENST00000404354 AEBP1Q8IUX7 1158 aa11.69□□□□□ -0.54
SMC1B-202ENST00000404354 FANCAO15360 1455 aa11.69□□□□□ -0.54
SMC1B-202ENST00000404354 IGSF3O75054 1194 aa11.69□□□□□ -0.54
SMC1B-202ENST00000404354 CHMP3Q9Y3E7 222 aa11.68□□□□□ -0.54
SMC1B-202ENST00000404354 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.68□□□□□ -0.54
SMC1B-202ENST00000404354 CYP2E1P05181 493 aaPredicted RBP11.68□□□□□ -0.54
SMC1B-202ENST00000404354 API5Q9BZZ5 524 aaKnown RBP11.68□□□□□ -0.54
SMC1B-202ENST00000404354 ZFYVE16Q7Z3T8 1539 aa11.68□□□□□ -0.54
SMC1B-202ENST00000404354 CBX1P83916 185 aa11.68□□□□□ -0.54
SMC1B-202ENST00000404354 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.68□□□□□ -0.54
SMC1B-202ENST00000404354 ADGRL1O94910 1474 aa11.67□□□□□ -0.54
SMC1B-202ENST00000404354 PDLIM2Q96JY6 352 aa11.67□□□□□ -0.54
SMC1B-202ENST00000404354 CEP85Q6P2H3 762 aa11.67□□□□□ -0.54
SMC1B-202ENST00000404354 DDX54Q8TDD1 881 aaKnown RBP11.67□□□□□ -0.54
SMC1B-202ENST00000404354 ERC2O15083 957 aa11.66□□□□□ -0.54
SMC1B-202ENST00000404354 SLC4A2P04920 1241 aa11.66□□□□□ -0.54
SMC1B-202ENST00000404354 CHMP4BQ9H444 224 aaKnown RBP11.66□□□□□ -0.54
SMC1B-202ENST00000404354 ABCC4O15439 1325 aa11.66□□□□□ -0.54
SMC1B-202ENST00000404354 MYOM2P54296 1465 aa11.66□□□□□ -0.54
SMC1B-202ENST00000404354 MROH2AA6NES4 1674 aa11.66□□□□□ -0.54
SMC1B-202ENST00000404354 ZNF500O60304 480 aaPredicted RBP11.66□□□□□ -0.54
SMC1B-202ENST00000404354 REC8O95072 547 aa11.66□□□□□ -0.54
SMC1B-202ENST00000404354 CCDC39Q9UFE4 941 aa11.66□□□□□ -0.54
SMC1B-202ENST00000404354 QRICH2Q9H0J4 1663 aa11.66□□□□□ -0.54
SMC1B-202ENST00000404354 ATP7AQ04656 1500 aa11.66□□□□□ -0.54
SMC1B-202ENST00000404354 NPATQ14207 1427 aa11.66□□□□□ -0.54
SMC1B-202ENST00000404354 ZNF428Q96B54 188 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms