RNA–Protein interactions for RNA: ENST00000402738.5

HERC3-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-202ENST00000402738 FERMT3Q86UX7 667 aa11.59□□□□□ -0.55
HERC3-202ENST00000402738 CBFA2T2O43439 604 aa11.58□□□□□ -0.56
HERC3-202ENST00000402738 MAP4K4O95819 1239 aaPredicted RBP11.58□□□□□ -0.56
HERC3-202ENST00000402738 BMS1Q14692 1282 aaKnown RBP11.58□□□□□ -0.56
HERC3-202ENST00000402738 TWISTNBQ3B726 338 aaPredicted RBP11.58□□□□□ -0.56
HERC3-202ENST00000402738 NGDNQ8NEJ9 315 aaKnown RBP11.58□□□□□ -0.56
HERC3-202ENST00000402738 WDR63Q8IWG1 891 aa11.58□□□□□ -0.56
HERC3-202ENST00000402738 CLASRPQ8N2M8 674 aaKnown RBP11.58□□□□□ -0.56
HERC3-202ENST00000402738 SMARCA4P51532 1647 aa11.58□□□□□ -0.56
HERC3-202ENST00000402738 SHTN1A0MZ66 631 aa11.58□□□□□ -0.56
HERC3-202ENST00000402738 TEFQ10587 303 aa11.58□□□□□ -0.56
HERC3-202ENST00000402738 TMEM57Q8N5G2 664 aa11.58□□□□□ -0.56
HERC3-202ENST00000402738 GOLGA6L7A0A1B0GV03 622 aa11.57□□□□□ -0.56
HERC3-202ENST00000402738 CRACR2AQ9BSW2 395 aa11.57□□□□□ -0.56
HERC3-202ENST00000402738 CARMIL2Q6F5E8 1435 aa11.57□□□□□ -0.56
HERC3-202ENST00000402738 IGHDP01880 384 aa11.57□□□□□ -0.56
HERC3-202ENST00000402738 GNAI3P08754 354 aa11.57□□□□□ -0.56
HERC3-202ENST00000402738 C8orf34Q49A92 452 aa11.57□□□□□ -0.56
HERC3-202ENST00000402738 CKAP2LQ8IYA6 745 aa11.57□□□□□ -0.56
HERC3-202ENST00000402738 CCDC181Q5TID7 509 aa11.56□□□□□ -0.56
HERC3-202ENST00000402738 LRSAM1Q6UWE0 723 aa11.56□□□□□ -0.56
HERC3-202ENST00000402738 BICRAQ9NZM4 1560 aa11.56□□□□□ -0.56
HERC3-202ENST00000402738 FAM177BA6PVY3 158 aa11.56□□□□□ -0.56
HERC3-202ENST00000402738 GBP3Q9H0R5 595 aa11.56□□□□□ -0.56
HERC3-202ENST00000402738 PDRG1Q9NUG6 133 aa11.56□□□□□ -0.56
HERC3-202ENST00000402738 LRRFIP2Q9Y608 721 aaKnown RBP11.56□□□□□ -0.56
HERC3-202ENST00000402738 CFAP100Q494V2 611 aa11.56□□□□□ -0.56
HERC3-202ENST00000402738 HCLS1P14317 486 aaPredicted RBP11.56□□□□□ -0.56
HERC3-202ENST00000402738 ODF2Q5BJF6 829 aa11.56□□□□□ -0.56
HERC3-202ENST00000402738 CEP135Q66GS9 1140 aa11.56□□□□□ -0.56
HERC3-202ENST00000402738 JAKMIP1Q96N16 626 aaKnown RBP11.56□□□□□ -0.56
HERC3-202ENST00000402738 JAKMIP3Q5VZ66 844 aa11.55□□□□□ -0.56
HERC3-202ENST00000402738 GNAI2P04899 355 aa11.55□□□□□ -0.56
HERC3-202ENST00000402738 PRKAR2BP31323 418 aa11.55□□□□□ -0.56
HERC3-202ENST00000402738 WASHC4Q2M389 1173 aa11.55□□□□□ -0.56
HERC3-202ENST00000402738 ARHGAP29Q52LW3 1261 aa11.55□□□□□ -0.56
HERC3-202ENST00000402738 TICAM2Q86XR7 235 aa11.55□□□□□ -0.56
HERC3-202ENST00000402738 NEUROD6Q96NK8 337 aa11.55□□□□□ -0.56
HERC3-202ENST00000402738 ARAP1Q96P48 1450 aa11.55□□□□□ -0.56
HERC3-202ENST00000402738 VGLL3A8MV65 326 aa11.55□□□□□ -0.56
HERC3-202ENST00000402738 TTC12Q9H892 705 aaPredicted RBP11.55□□□□□ -0.56
HERC3-202ENST00000402738 MNAT1P51948 309 aa11.55□□□□□ -0.56
HERC3-202ENST00000402738 TMX1Q9H3N1 280 aa11.55□□□□□ -0.56
HERC3-202ENST00000402738 ZNHIT6Q9NWK9 470 aaKnown RBP11.55□□□□□ -0.56
HERC3-202ENST00000402738 CFAP45Q9UL16 551 aa11.55□□□□□ -0.56
HERC3-202ENST00000402738 PPP6R1Q9UPN7 881 aa11.55□□□□□ -0.56
HERC3-202ENST00000402738 ANKRD1Q15327 319 aa11.54□□□□□ -0.56
HERC3-202ENST00000402738 STK11IPQ8N1F8 1099 aa11.54□□□□□ -0.56
HERC3-202ENST00000402738 TXLNBQ8N3L3 684 aa11.54□□□□□ -0.56
HERC3-202ENST00000402738 PRM3Q9NNZ6 103 aa11.54□□□□□ -0.56
HERC3-202ENST00000402738 PAXBP1Q9Y5B6 917 aa11.54□□□□□ -0.56
HERC3-202ENST00000402738 ERICH2A1L162 156 aa11.54□□□□□ -0.56
HERC3-202ENST00000402738 CASQ1P31415 396 aa11.54□□□□□ -0.56
HERC3-202ENST00000402738 MYO6Q9UM54 1294 aa11.54□□□□□ -0.56
HERC3-202ENST00000402738 ZSCAN12O43309 604 aa11.54□□□□□ -0.56
HERC3-202ENST00000402738 CCDC83Q8IWF9 413 aa11.54□□□□□ -0.56
HERC3-202ENST00000402738 RARSP54136 660 aaKnown RBP11.54□□□□□ -0.56
HERC3-202ENST00000402738 UVSSAQ2YD98 709 aa11.54□□□□□ -0.56
HERC3-202ENST00000402738 JMYQ8N9B5 988 aa11.54□□□□□ -0.56
HERC3-202ENST00000402738 ZSCAN31Q96LW9 406 aaPredicted RBP11.54□□□□□ -0.56
HERC3-202ENST00000402738 LRPPRCP42704 1394 aaKnown RBP11.53□□□□□ -0.56
HERC3-202ENST00000402738 SMTNL1A8MU46 457 aa11.53□□□□□ -0.56
HERC3-202ENST00000402738 HSP90AB2PQ58FF8 381 aa11.53□□□□□ -0.56
HERC3-202ENST00000402738 DYDC1Q8WWB3 177 aa11.53□□□□□ -0.56
HERC3-202ENST00000402738 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.53□□□□□ -0.56
HERC3-202ENST00000402738 FBXO3Q9UK99 471 aa11.53□□□□□ -0.56
HERC3-202ENST00000402738 V9GYY5 206 aaPredicted RBP11.53□□□□□ -0.56
HERC3-202ENST00000402738 PRIM1P49642 420 aaKnown RBP11.53□□□□□ -0.56
HERC3-202ENST00000402738 MAGEC2Q9UBF1 373 aaPredicted RBP11.53□□□□□ -0.56
HERC3-202ENST00000402738 CUX1P39880 1505 aa11.53□□□□□ -0.56
HERC3-202ENST00000402738 RNF187Q5TA31 235 aaPredicted RBP11.53□□□□□ -0.56
HERC3-202ENST00000402738 BLOC1S2Q6QNY1 142 aa11.53□□□□□ -0.56
HERC3-202ENST00000402738 DNAAF4Q8WXU2 420 aa11.53□□□□□ -0.56
HERC3-202ENST00000402738 UNC13AQ9UPW8 1703 aa11.52□□□□□ -0.56
HERC3-202ENST00000402738 EPB41L2O43491 1005 aaKnown RBP11.52□□□□□ -0.56
HERC3-202ENST00000402738 SNW1Q13573 536 aaKnown RBP11.52□□□□□ -0.56
HERC3-202ENST00000402738 TAX1BP1Q86VP1 789 aa11.52□□□□□ -0.56
HERC3-202ENST00000402738 FAM107BQ9H098 131 aa11.52□□□□□ -0.56
HERC3-202ENST00000402738 HIP1O00291 1037 aa11.52□□□□□ -0.57
HERC3-202ENST00000402738 DDX58O95786 925 aaKnown RBP11.52□□□□□ -0.57
HERC3-202ENST00000402738 CASTP20810 708 aaKnown RBP11.52□□□□□ -0.57
HERC3-202ENST00000402738 KIF4BQ2VIQ3 1234 aa11.52□□□□□ -0.57
HERC3-202ENST00000402738 CWC27Q6UX04 472 aaKnown RBP11.52□□□□□ -0.57
HERC3-202ENST00000402738 DDX11Q96FC9 970 aa11.52□□□□□ -0.57
HERC3-202ENST00000402738 DACH1Q9UI36 760 aa11.52□□□□□ -0.57
HERC3-202ENST00000402738 ATAD2BQ9ULI0 1458 aa11.52□□□□□ -0.57
HERC3-202ENST00000402738 NEMFO60524 1076 aa11.52□□□□□ -0.57
HERC3-202ENST00000402738 CT47A1Q5JQC4 288 aaPredicted RBP11.52□□□□□ -0.57
HERC3-202ENST00000402738 C1orf141Q5JVX7 400 aa11.52□□□□□ -0.57
HERC3-202ENST00000402738 NCOA2Q15596 1464 aa11.52□□□□□ -0.57
HERC3-202ENST00000402738 EPS15P42566 896 aa11.51□□□□□ -0.57
HERC3-202ENST00000402738 HS1BP3Q53T59 392 aa11.51□□□□□ -0.57
HERC3-202ENST00000402738 CABP2Q9NPB3 220 aa11.51□□□□□ -0.57
HERC3-202ENST00000402738 DUSP27Q5VZP5 1158 aa11.51□□□□□ -0.57
HERC3-202ENST00000402738 SMARCC1Q92922 1105 aaPredicted RBP11.51□□□□□ -0.57
HERC3-202ENST00000402738 VGFO15240 615 aaPredicted RBP11.51□□□□□ -0.57
HERC3-202ENST00000402738 PIP4K2AP48426 406 aaPredicted RBP11.51□□□□□ -0.57
HERC3-202ENST00000402738 IQCEQ6IPM2 695 aa11.51□□□□□ -0.57
HERC3-202ENST00000402738 ANO10Q9NW15 660 aa11.51□□□□□ -0.57
HERC3-202ENST00000402738 NKTRP30414 1462 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms