RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 RIMBP3CA6NJZ7 1639 aa17.71■□□□□ 0.42
ATG3-202ENST00000402314 RIMBP3BA6NNM3 1639 aa17.71■□□□□ 0.42
ATG3-202ENST00000402314 RIMBP3Q9UFD9 1639 aa17.71■□□□□ 0.42
ATG3-202ENST00000402314 ZMYM3Q14202 1370 aa17.7■□□□□ 0.42
ATG3-202ENST00000402314 PRR36Q9H6K5 1346 aa17.7■□□□□ 0.42
ATG3-202ENST00000402314 AEBP1Q8IUX7 1158 aa17.7■□□□□ 0.42
ATG3-202ENST00000402314 LNPKQ9C0E8 428 aa17.7■□□□□ 0.42
ATG3-202ENST00000402314 ZBTB40Q9NUA8 1239 aa17.7■□□□□ 0.42
ATG3-202ENST00000402314 IL16Q14005 1332 aa17.7■□□□□ 0.42
ATG3-202ENST00000402314 MED14O60244 1454 aa17.7■□□□□ 0.42
ATG3-202ENST00000402314 CLCN1P35523 988 aa17.7■□□□□ 0.42
ATG3-202ENST00000402314 CEBPAP49715 358 aaPredicted RBP17.7■□□□□ 0.42
ATG3-202ENST00000402314 COG3Q96JB2 828 aa17.69■□□□□ 0.42
ATG3-202ENST00000402314 MBIPQ9NS73 344 aa17.69■□□□□ 0.42
ATG3-202ENST00000402314 CCDC61Q9Y6R9 512 aa17.69■□□□□ 0.42
ATG3-202ENST00000402314 AAMPQ13685 434 aa17.69■□□□□ 0.42
ATG3-202ENST00000402314 C22orf23Q9BZE7 217 aa17.69■□□□□ 0.42
ATG3-202ENST00000402314 VAMP4O75379 141 aa17.68■□□□□ 0.42
ATG3-202ENST00000402314 GRPEL1Q9HAV7 217 aa17.68■□□□□ 0.42
ATG3-202ENST00000402314 FAM135BQ49AJ0 1406 aa17.68■□□□□ 0.42
ATG3-202ENST00000402314 FSD2A1L4K1 749 aa17.68■□□□□ 0.42
ATG3-202ENST00000402314 KRT24Q2M2I5 525 aa17.68■□□□□ 0.42
ATG3-202ENST00000402314 C8orf58Q8NAV2 365 aa17.68■□□□□ 0.42
ATG3-202ENST00000402314 SLC26A8Q96RN1 970 aa17.68■□□□□ 0.42
ATG3-202ENST00000402314 CPS1P31327 1500 aa17.68■□□□□ 0.42
ATG3-202ENST00000402314 TRIM44Q96DX7 344 aaPredicted RBP17.67■□□□□ 0.42
ATG3-202ENST00000402314 ESPNB1AK53 854 aa17.67■□□□□ 0.42
ATG3-202ENST00000402314 KIF16BQ96L93 1317 aa17.66■□□□□ 0.42
ATG3-202ENST00000402314 IPO8O15397 1037 aaKnown RBP17.66■□□□□ 0.42
ATG3-202ENST00000402314 GAS2L3Q86XJ1 694 aa17.66■□□□□ 0.42
ATG3-202ENST00000402314 MAP2P11137 1827 aaKnown RBP17.66■□□□□ 0.42
ATG3-202ENST00000402314 HDAC1Q13547 482 aaPredicted RBP17.66■□□□□ 0.42
ATG3-202ENST00000402314 CPSF1Q10570 1443 aaKnown RBP17.65■□□□□ 0.42
ATG3-202ENST00000402314 CHMP5Q9NZZ3 219 aa17.65■□□□□ 0.42
ATG3-202ENST00000402314 PPP6R1Q9UPN7 881 aa17.65■□□□□ 0.42
ATG3-202ENST00000402314 ANKRD26Q9UPS8 1709 aa17.65■□□□□ 0.42
ATG3-202ENST00000402314 SPATA31D1Q6ZQQ2 1576 aa17.64■□□□□ 0.42
ATG3-202ENST00000402314 LTKP29376 864 aa17.64■□□□□ 0.41
ATG3-202ENST00000402314 ROBO2Q9HCK4 1378 aa17.64■□□□□ 0.41
ATG3-202ENST00000402314 ATP7BP35670 1465 aa17.64■□□□□ 0.41
ATG3-202ENST00000402314 SMC5Q8IY18 1101 aa17.64■□□□□ 0.41
ATG3-202ENST00000402314 MRPL50Q8N5N7 158 aaKnown RBP17.64■□□□□ 0.41
ATG3-202ENST00000402314 EDC4Q6P2E9 1401 aaKnown RBP17.64■□□□□ 0.41
ATG3-202ENST00000402314 KIF20BQ96Q89 1820 aa17.64■□□□□ 0.41
ATG3-202ENST00000402314 RBM10P98175 930 aaKnown RBP17.64■□□□□ 0.41
ATG3-202ENST00000402314 ZBTB7CA1YPR0 619 aa17.63■□□□□ 0.41
ATG3-202ENST00000402314 MRE11P49959 708 aa17.63■□□□□ 0.41
ATG3-202ENST00000402314 TWISTNBQ3B726 338 aaPredicted RBP17.63■□□□□ 0.41
ATG3-202ENST00000402314 SULT6B1Q6IMI4 303 aa17.63■□□□□ 0.41
ATG3-202ENST00000402314 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.63■□□□□ 0.41
ATG3-202ENST00000402314 ALDH1L2Q3SY69 923 aa17.62■□□□□ 0.41
ATG3-202ENST00000402314 AGLP35573 1532 aa17.62■□□□□ 0.41
ATG3-202ENST00000402314 HSP90AB2PQ58FF8 381 aa17.61■□□□□ 0.41
ATG3-202ENST00000402314 MCM10Q7L590 875 aa17.61■□□□□ 0.41
ATG3-202ENST00000402314 HSCBQ8IWL3 235 aa17.61■□□□□ 0.41
ATG3-202ENST00000402314 NRXN3Q9Y4C0 1643 aa17.61■□□□□ 0.41
ATG3-202ENST00000402314 ZBTB7BO15156 539 aaPredicted RBP17.61■□□□□ 0.41
ATG3-202ENST00000402314 GNAI1P63096 354 aa17.61■□□□□ 0.41
ATG3-202ENST00000402314 ANKRD45Q5TZF3 282 aa17.61■□□□□ 0.41
ATG3-202ENST00000402314 DLC1Q96QB1 1528 aa17.61■□□□□ 0.41
ATG3-202ENST00000402314 ACEP12821 1306 aa17.6■□□□□ 0.41
ATG3-202ENST00000402314 SETD1AO15047 1707 aaKnown RBP17.6■□□□□ 0.41
ATG3-202ENST00000402314 EIF4A2Q14240 407 aaKnown RBP17.6■□□□□ 0.41
ATG3-202ENST00000402314 RRP9O43818 475 aaKnown RBP17.6■□□□□ 0.41
ATG3-202ENST00000402314 MIS18AQ9NYP9 233 aa17.6■□□□□ 0.41
ATG3-202ENST00000402314 TNRQ92752 1358 aa17.6■□□□□ 0.41
ATG3-202ENST00000402314 IFT57Q9NWB7 429 aa17.59■□□□□ 0.41
ATG3-202ENST00000402314 ZNF853P0CG23 659 aa17.59■□□□□ 0.41
ATG3-202ENST00000402314 SIRT2Q8IXJ6 389 aa17.59■□□□□ 0.41
ATG3-202ENST00000402314 VIRMAQ69YN4 1812 aaKnown RBP17.59■□□□□ 0.41
ATG3-202ENST00000402314 NUCB1Q02818 461 aa17.58■□□□□ 0.4
ATG3-202ENST00000402314 CHD1LQ86WJ1 897 aa17.58■□□□□ 0.4
ATG3-202ENST00000402314 TNPO1Q92973 898 aaKnown RBP17.58■□□□□ 0.4
ATG3-202ENST00000402314 CFAP44Q96MT7 982 aa17.58■□□□□ 0.4
ATG3-202ENST00000402314 TTC21BQ7Z4L5 1316 aa17.57■□□□□ 0.4
ATG3-202ENST00000402314 HSP90AB1P08238 724 aaKnown RBP17.57■□□□□ 0.4
ATG3-202ENST00000402314 TMEM2Q9UHN6 1383 aa17.56■□□□□ 0.4
ATG3-202ENST00000402314 FOXO3O43524 673 aa17.56■□□□□ 0.4
ATG3-202ENST00000402314 NCLP19338 710 aaKnown RBP17.56■□□□□ 0.4
ATG3-202ENST00000402314 RBM42Q9BTD8 480 aaKnown RBP17.56■□□□□ 0.4
ATG3-202ENST00000402314 KIAA1211Q6ZU35 1233 aa17.55■□□□□ 0.4
ATG3-202ENST00000402314 HDGFP51858 240 aaKnown RBP17.55■□□□□ 0.4
ATG3-202ENST00000402314 CDK12Q9NYV4 1490 aaPredicted RBP17.55■□□□□ 0.4
ATG3-202ENST00000402314 CDC42BPGQ6DT37 1551 aa17.54■□□□□ 0.4
ATG3-202ENST00000402314 CALD1Q05682 793 aaKnown RBP17.54■□□□□ 0.4
ATG3-202ENST00000402314 NUTM2GQ5VZR2 741 aa17.54■□□□□ 0.4
ATG3-202ENST00000402314 APBB1O00213 710 aa17.54■□□□□ 0.4
ATG3-202ENST00000402314 AATKQ6ZMQ8 1374 aa17.54■□□□□ 0.4
ATG3-202ENST00000402314 REREQ9P2R6 1566 aa17.53■□□□□ 0.4
ATG3-202ENST00000402314 ZNF692Q9BU19 519 aaPredicted RBP17.53■□□□□ 0.4
ATG3-202ENST00000402314 CD2BP2O95400 341 aaKnown RBP17.53■□□□□ 0.4
ATG3-202ENST00000402314 ADAMTS13Q76LX8 1427 aa17.52■□□□□ 0.4
ATG3-202ENST00000402314 DDX11L8A8MPP1 907 aa17.52■□□□□ 0.39
ATG3-202ENST00000402314 FAM13BQ9NYF5 915 aa17.51■□□□□ 0.39
ATG3-202ENST00000402314 ABCC4O15439 1325 aa17.51■□□□□ 0.39
ATG3-202ENST00000402314 AMOTL2Q9Y2J4 779 aa17.51■□□□□ 0.39
ATG3-202ENST00000402314 BRPF1P55201 1214 aaPredicted RBP17.5■□□□□ 0.39
ATG3-202ENST00000402314 LMOD3Q0VAK6 560 aa17.5■□□□□ 0.39
ATG3-202ENST00000402314 C16orf71Q8IYS4 520 aaPredicted RBP17.5■□□□□ 0.39
ATG3-202ENST00000402314 ZNF428Q96B54 188 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms