RNA–Protein interactions for RNA: ENST00000400430.6

LINC00598-201, long intergenic non-protein coding RNA 598, humanhuman

TSL 2

Gene LINC00598, Length 702 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-201ENST00000400430 RAPGEF6Q8TEU7 1601 aa6.65□□□□□ -1.35
LINC00598-201ENST00000400430 TSR1Q2NL82 804 aaKnown RBP6.64□□□□□ -1.35
LINC00598-201ENST00000400430 PPP4R3BQ5MIZ7 849 aa6.64□□□□□ -1.35
LINC00598-201ENST00000400430 VARS2Q5ST30 1063 aaKnown RBP6.64□□□□□ -1.35
LINC00598-201ENST00000400430 FAM9AQ8IZU1 332 aaPredicted RBP6.64□□□□□ -1.35
LINC00598-201ENST00000400430 UBXN4Q92575 508 aa6.64□□□□□ -1.35
LINC00598-201ENST00000400430 DDX12PQ92771 950 aa6.64□□□□□ -1.35
LINC00598-201ENST00000400430 HS3ST6Q96QI5 342 aa6.64□□□□□ -1.35
LINC00598-201ENST00000400430 FAM217BQ9NTX9 383 aaPredicted RBP6.64□□□□□ -1.35
LINC00598-201ENST00000400430 SYNMO15061 1565 aa6.64□□□□□ -1.35
LINC00598-201ENST00000400430 FAM205CA6NFA0 338 aa6.63□□□□□ -1.35
LINC00598-201ENST00000400430 STRCP1A6NGW2 1772 aa6.63□□□□□ -1.35
LINC00598-201ENST00000400430 VAMP1P23763 118 aa6.63□□□□□ -1.35
LINC00598-201ENST00000400430 EN1Q05925 392 aaPredicted RBP6.63□□□□□ -1.35
LINC00598-201ENST00000400430 ZNF518AQ6AHZ1 1483 aa6.63□□□□□ -1.35
LINC00598-201ENST00000400430 CC2D2BQ6DHV5 1058 aa6.63□□□□□ -1.35
LINC00598-201ENST00000400430 TYW1BQ6NUM6 668 aa6.63□□□□□ -1.35
LINC00598-201ENST00000400430 ZNF454Q8N9F8 522 aa6.63□□□□□ -1.35
LINC00598-201ENST00000400430 SETBP1Q9Y6X0 1596 aa6.63□□□□□ -1.35
LINC00598-201ENST00000400430 DNMT1P26358 1616 aaKnown RBP6.62□□□□□ -1.35
LINC00598-201ENST00000400430 NCLP19338 710 aaKnown RBP6.62□□□□□ -1.35
LINC00598-201ENST00000400430 ZNF687Q8N1G0 1237 aa6.62□□□□□ -1.35
LINC00598-201ENST00000400430 ZDHHC16Q969W1 377 aa6.62□□□□□ -1.35
LINC00598-201ENST00000400430 BCL2L12Q9HB09 334 aa6.62□□□□□ -1.35
LINC00598-201ENST00000400430 PLCH2O75038 1416 aa6.61□□□□□ -1.35
LINC00598-201ENST00000400430 PALM3A6NDB9 673 aaPredicted RBP6.61□□□□□ -1.35
LINC00598-201ENST00000400430 POTEMA6NI47 508 aa6.61□□□□□ -1.35
LINC00598-201ENST00000400430 ZC3H6P61129 1189 aaKnown RBP6.61□□□□□ -1.35
LINC00598-201ENST00000400430 IFFO2Q5TF58 517 aa6.61□□□□□ -1.35
LINC00598-201ENST00000400430 POTEGQ6S5H5 508 aa6.61□□□□□ -1.35
LINC00598-201ENST00000400430 LIMD1Q9UGP4 676 aa6.61□□□□□ -1.35
LINC00598-201ENST00000400430 A2ML1A8K2U0 1454 aa6.6□□□□□ -1.35
LINC00598-201ENST00000400430 ZMYM3Q14202 1370 aa6.6□□□□□ -1.35
LINC00598-201ENST00000400430 GPR37L1O60883 481 aa6.6□□□□□ -1.35
LINC00598-201ENST00000400430 KDM4AO75164 1064 aa6.6□□□□□ -1.35
LINC00598-201ENST00000400430 PHLDB3Q6NSJ2 640 aa6.6□□□□□ -1.35
LINC00598-201ENST00000400430 POTEEQ6S8J3 1075 aa6.6□□□□□ -1.35
LINC00598-201ENST00000400430 HIRIP3Q9BW71 556 aaPredicted RBP6.6□□□□□ -1.35
LINC00598-201ENST00000400430 ADAM33Q9BZ11 813 aa6.6□□□□□ -1.35
LINC00598-201ENST00000400430 ATP1B4Q9UN42 357 aaPredicted RBP6.6□□□□□ -1.35
LINC00598-201ENST00000400430 MLH3Q9UHC1 1453 aa6.6□□□□□ -1.35
LINC00598-201ENST00000400430 ANKRD62A6NC57 917 aa6.59□□□□□ -1.35
LINC00598-201ENST00000400430 PBX2P40425 430 aa6.59□□□□□ -1.35
LINC00598-201ENST00000400430 GIMAP6Q6P9H5 292 aa6.59□□□□□ -1.35
LINC00598-201ENST00000400430 ZNF592Q92610 1267 aa6.59□□□□□ -1.35
LINC00598-201ENST00000400430 UCN2Q96RP3 112 aa6.59□□□□□ -1.35
LINC00598-201ENST00000400430 BCL2L13Q9BXK5 485 aa6.59□□□□□ -1.35
LINC00598-201ENST00000400430 ESF1Q9H501 851 aaKnown RBP6.59□□□□□ -1.35
LINC00598-201ENST00000400430 BRPF3Q9ULD4 1205 aa6.59□□□□□ -1.35
LINC00598-201ENST00000400430 CDK12Q9NYV4 1490 aaPredicted RBP6.59□□□□□ -1.36
LINC00598-201ENST00000400430 FAM135BQ49AJ0 1406 aa6.59□□□□□ -1.36
LINC00598-201ENST00000400430 SAMD9Q5K651 1589 aa6.58□□□□□ -1.36
LINC00598-201ENST00000400430 LMOD1P29536 600 aaPredicted RBP6.58□□□□□ -1.36
LINC00598-201ENST00000400430 TRIM52Q96A61 297 aa6.58□□□□□ -1.36
LINC00598-201ENST00000400430 TBC1D2Q9BYX2 928 aa6.58□□□□□ -1.36
LINC00598-201ENST00000400430 ALG2Q9H553 416 aa6.58□□□□□ -1.36
LINC00598-201ENST00000400430 MED14O60244 1454 aa6.58□□□□□ -1.36
LINC00598-201ENST00000400430 DEPDC5O75140 1603 aa6.58□□□□□ -1.36
LINC00598-201ENST00000400430 CDK13Q14004 1512 aaKnown RBP6.57□□□□□ -1.36
LINC00598-201ENST00000400430 RECKO95980 971 aa6.57□□□□□ -1.36
LINC00598-201ENST00000400430 TUSC1Q2TAM9 212 aa6.57□□□□□ -1.36
LINC00598-201ENST00000400430 NAALADL2Q58DX5 795 aa6.57□□□□□ -1.36
LINC00598-201ENST00000400430 B4GALNT3Q6L9W6 998 aa6.57□□□□□ -1.36
LINC00598-201ENST00000400430 NPAS4Q8IUM7 802 aa6.57□□□□□ -1.36
LINC00598-201ENST00000400430 CCER1Q8TC90 406 aaPredicted RBP6.57□□□□□ -1.36
LINC00598-201ENST00000400430 GIPC2Q8TF65 315 aa6.57□□□□□ -1.36
LINC00598-201ENST00000400430 GJD4Q96KN9 370 aaPredicted RBP6.57□□□□□ -1.36
LINC00598-201ENST00000400430 CLTCQ00610 1675 aaKnown RBP6.57□□□□□ -1.36
LINC00598-201ENST00000400430 LRP6O75581 1613 aa6.57□□□□□ -1.36
LINC00598-201ENST00000400430 XIRP1Q702N8 1843 aaKnown RBP6.56□□□□□ -1.36
LINC00598-201ENST00000400430 PTPREP23469 700 aa6.56□□□□□ -1.36
LINC00598-201ENST00000400430 C6orf132Q5T0Z8 1188 aa6.56□□□□□ -1.36
LINC00598-201ENST00000400430 ZNF662Q6ZS27 426 aa6.56□□□□□ -1.36
LINC00598-201ENST00000400430 AFAP1Q8N556 730 aa6.56□□□□□ -1.36
LINC00598-201ENST00000400430 PRM3Q9NNZ6 103 aa6.56□□□□□ -1.36
LINC00598-201ENST00000400430 NPDC1Q9NQX5 325 aaPredicted RBP6.56□□□□□ -1.36
LINC00598-201ENST00000400430 LRP5O75197 1615 aa6.56□□□□□ -1.36
LINC00598-201ENST00000400430 NPHP4O75161 1426 aaPredicted RBP6.56□□□□□ -1.36
LINC00598-201ENST00000400430 MYO5CQ9NQX4 1742 aa6.56□□□□□ -1.36
LINC00598-201ENST00000400430 IQGAP1P46940 1657 aa6.55□□□□□ -1.36
LINC00598-201ENST00000400430 KIDINS220Q9ULH0 1771 aa6.55□□□□□ -1.36
LINC00598-201ENST00000400430 PLEKHD1A6NEE1 506 aa6.55□□□□□ -1.36
LINC00598-201ENST00000400430 PPP1R3GB7ZBB8 358 aa6.55□□□□□ -1.36
LINC00598-201ENST00000400430 ARHGAP33O14559 1287 aa6.55□□□□□ -1.36
LINC00598-201ENST00000400430 MAP3K7O43318 606 aa6.55□□□□□ -1.36
LINC00598-201ENST00000400430 SF3A1Q15459 793 aaKnown RBP6.55□□□□□ -1.36
LINC00598-201ENST00000400430 TMED8Q6PL24 325 aaPredicted RBP6.55□□□□□ -1.36
LINC00598-201ENST00000400430 RBM33Q96EV2 1170 aaKnown RBP6.55□□□□□ -1.36
LINC00598-201ENST00000400430 KRTAP3-3Q9BYR6 98 aa6.55□□□□□ -1.36
LINC00598-201ENST00000400430 KRTAP3-2Q9BYR7 98 aa6.55□□□□□ -1.36
LINC00598-201ENST00000400430 CDHR5Q9HBB8 845 aa6.55□□□□□ -1.36
LINC00598-201ENST00000400430 ROBO1Q9Y6N7 1651 aa6.55□□□□□ -1.36
LINC00598-201ENST00000400430 COL9A1P20849 921 aa6.54□□□□□ -1.36
LINC00598-201ENST00000400430 WASHC4Q2M389 1173 aa6.54□□□□□ -1.36
LINC00598-201ENST00000400430 CDCA8Q53HL2 280 aa6.54□□□□□ -1.36
LINC00598-201ENST00000400430 TFIP11Q9UBB9 837 aaKnown RBP6.54□□□□□ -1.36
LINC00598-201ENST00000400430 ABCC1P33527 1531 aa6.54□□□□□ -1.36
LINC00598-201ENST00000400430 RGS12O14924 1447 aa6.53□□□□□ -1.36
LINC00598-201ENST00000400430 ITSN2Q9NZM3 1697 aa6.53□□□□□ -1.36
LINC00598-201ENST00000400430 SOWAHDA6NJG2 315 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms