RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 UNC5CLQ8IV45 518 aa10.29□□□□□ -0.76
USP16-204ENST00000399976 IP6K1Q92551 441 aa10.29□□□□□ -0.76
USP16-204ENST00000399976 BRWD3Q6RI45 1802 aa10.29□□□□□ -0.76
USP16-204ENST00000399976 XPCQ01831 940 aaPredicted RBP10.29□□□□□ -0.76
USP16-204ENST00000399976 CDCA7Q9BWT1 371 aaPredicted RBP10.29□□□□□ -0.76
USP16-204ENST00000399976 RALBP1Q15311 655 aa10.28□□□□□ -0.76
USP16-204ENST00000399976 BARGINQ6ZT62 677 aa10.28□□□□□ -0.76
USP16-204ENST00000399976 TRPC5Q9UL62 973 aaPredicted RBP10.28□□□□□ -0.76
USP16-204ENST00000399976 WDR17Q8IZU2 1322 aa10.28□□□□□ -0.76
USP16-204ENST00000399976 AFF2P51816 1311 aa10.27□□□□□ -0.76
USP16-204ENST00000399976 SBF2Q86WG5 1849 aa10.27□□□□□ -0.77
USP16-204ENST00000399976 ZNF831Q5JPB2 1677 aa10.27□□□□□ -0.77
USP16-204ENST00000399976 CICQ96RK0 1608 aaPredicted RBP10.27□□□□□ -0.77
USP16-204ENST00000399976 SPATA31A5Q5VU36 1347 aa10.26□□□□□ -0.77
USP16-204ENST00000399976 SPATA31A7Q8IWB4 1347 aa10.26□□□□□ -0.77
USP16-204ENST00000399976 VIRMAQ69YN4 1812 aaKnown RBP10.26□□□□□ -0.77
USP16-204ENST00000399976 FAM83GA6ND36 823 aa10.26□□□□□ -0.77
USP16-204ENST00000399976 PRDM11Q9NQV5 511 aa10.26□□□□□ -0.77
USP16-204ENST00000399976 ERBB3P21860 1342 aa10.26□□□□□ -0.77
USP16-204ENST00000399976 MEX3CQ5U5Q3 659 aaKnown RBP10.26□□□□□ -0.77
USP16-204ENST00000399976 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.26□□□□□ -0.77
USP16-204ENST00000399976 MAP3K19Q56UN5 1328 aa10.25□□□□□ -0.77
USP16-204ENST00000399976 NHSQ6T4R5 1651 aa10.25□□□□□ -0.77
USP16-204ENST00000399976 KDRP35968 1356 aa10.25□□□□□ -0.77
USP16-204ENST00000399976 HOXC9P31274 260 aa10.25□□□□□ -0.77
USP16-204ENST00000399976 CARD10Q9BWT7 1032 aa10.25□□□□□ -0.77
USP16-204ENST00000399976 SPATA31A1Q5TZJ5 1347 aa10.24□□□□□ -0.77
USP16-204ENST00000399976 RBM6P78332 1123 aaKnown RBP10.24□□□□□ -0.77
USP16-204ENST00000399976 HAP1P54257 671 aaPredicted RBP10.24□□□□□ -0.77
USP16-204ENST00000399976 USP21Q9UK80 565 aa10.24□□□□□ -0.77
USP16-204ENST00000399976 TNS2Q63HR2 1409 aa10.24□□□□□ -0.77
USP16-204ENST00000399976 TNS1Q9HBL0 1735 aaKnown RBP10.23□□□□□ -0.77
USP16-204ENST00000399976 GGNBP2Q9H3C7 697 aa10.23□□□□□ -0.77
USP16-204ENST00000399976 RGS17Q9UGC6 210 aaPredicted RBP10.23□□□□□ -0.77
USP16-204ENST00000399976 MORC1Q86VD1 984 aa10.23□□□□□ -0.77
USP16-204ENST00000399976 NGLY1Q96IV0 654 aa10.23□□□□□ -0.77
USP16-204ENST00000399976 POLKQ9UBT6 870 aa10.23□□□□□ -0.77
USP16-204ENST00000399976 OVOS2A0A0G2JMS6 1433 aa10.23□□□□□ -0.77
USP16-204ENST00000399976 SCN11AQ9UI33 1791 aa10.22□□□□□ -0.77
USP16-204ENST00000399976 CABLES1Q8TDN4 633 aa10.22□□□□□ -0.77
USP16-204ENST00000399976 GJD4Q96KN9 370 aaPredicted RBP10.22□□□□□ -0.77
USP16-204ENST00000399976 RGS12O14924 1447 aa10.22□□□□□ -0.77
USP16-204ENST00000399976 LMOD2Q6P5Q4 547 aa10.21□□□□□ -0.77
USP16-204ENST00000399976 ZRANB1Q9UGI0 708 aa10.21□□□□□ -0.77
USP16-204ENST00000399976 IGSF1Q8N6C5 1336 aa10.21□□□□□ -0.77
USP16-204ENST00000399976 C8orf37Q96NL8 207 aa10.21□□□□□ -0.78
USP16-204ENST00000399976 BTG4Q9NY30 223 aa10.21□□□□□ -0.78
USP16-204ENST00000399976 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.21□□□□□ -0.781e-6■■■■□ 22.7
USP16-204ENST00000399976 SIPA1L3O60292 1781 aaPredicted RBP10.21□□□□□ -0.78
USP16-204ENST00000399976 MYBBP1AQ9BQG0 1328 aaKnown RBP10.21□□□□□ -0.78
USP16-204ENST00000399976 NUTM2BA6NNL0 878 aaPredicted RBP10.2□□□□□ -0.78
USP16-204ENST00000399976 NUTM2EB1AL46 878 aaPredicted RBP10.2□□□□□ -0.78
USP16-204ENST00000399976 POTEDQ86YR6 584 aa10.2□□□□□ -0.78
USP16-204ENST00000399976 NUTM2AQ8IVF1 878 aaPredicted RBP10.2□□□□□ -0.78
USP16-204ENST00000399976 PAPPAQ13219 1627 aa10.2□□□□□ -0.78
USP16-204ENST00000399976 PHF23Q9BUL5 403 aaPredicted RBP10.2□□□□□ -0.78
USP16-204ENST00000399976 ADAMTS2O95450 1211 aa10.19□□□□□ -0.78
USP16-204ENST00000399976 TCP11L2Q8N4U5 519 aa10.19□□□□□ -0.78
USP16-204ENST00000399976 RREB1Q92766 1687 aa10.19□□□□□ -0.78
USP16-204ENST00000399976 QSER1Q2KHR3 1735 aa10.19□□□□□ -0.78
USP16-204ENST00000399976 NCBP3Q53F19 620 aaKnown RBP10.19□□□□□ -0.78
USP16-204ENST00000399976 MRC1P22897 1456 aa10.18□□□□□ -0.78
USP16-204ENST00000399976 RXRBP28702 533 aa10.18□□□□□ -0.78
USP16-204ENST00000399976 AMPHP49418 695 aa10.18□□□□□ -0.78
USP16-204ENST00000399976 ZC3H6P61129 1189 aaKnown RBP10.18□□□□□ -0.78
USP16-204ENST00000399976 ANKRD24Q8TF21 1146 aa10.18□□□□□ -0.78
USP16-204ENST00000399976 PPP2R1AP30153 589 aa10.18□□□□□ -0.78
USP16-204ENST00000399976 NUTM2GQ5VZR2 741 aa10.18□□□□□ -0.78
USP16-204ENST00000399976 QTRT2Q9H974 415 aaKnown RBP10.18□□□□□ -0.78
USP16-204ENST00000399976 AXIN2Q9Y2T1 843 aa10.18□□□□□ -0.78
USP16-204ENST00000399976 LY75O60449 1722 aa10.17□□□□□ -0.78
USP16-204ENST00000399976 DOT1LQ8TEK3 1739 aa10.17□□□□□ -0.78
USP16-204ENST00000399976 CFAP53Q96M91 514 aa10.17□□□□□ -0.78
USP16-204ENST00000399976 ITGB4P16144 1822 aa10.17□□□□□ -0.78
USP16-204ENST00000399976 PRKRIP1Q9H875 184 aaPredicted RBP10.17□□□□□ -0.78
USP16-204ENST00000399976 TOGARAM1Q9Y4F4 1720 aa10.17□□□□□ -0.78
USP16-204ENST00000399976 IL13P35225 146 aa10.17□□□□□ -0.78
USP16-204ENST00000399976 POLR3GLQ9BT43 218 aa10.17□□□□□ -0.78
USP16-204ENST00000399976 DLG5Q8TDM6 1919 aa10.16□□□□□ -0.78
USP16-204ENST00000399976 POTEAQ6S8J7 498 aa10.16□□□□□ -0.78
USP16-204ENST00000399976 MEGF6O75095 1541 aa10.15□□□□□ -0.78
USP16-204ENST00000399976 EVA1CP58658 441 aa10.15□□□□□ -0.78
USP16-204ENST00000399976 EMILIN1Q9Y6C2 1016 aa10.15□□□□□ -0.78
USP16-204ENST00000399976 UBR2Q8IWV8 1755 aa10.15□□□□□ -0.78
USP16-204ENST00000399976 EIF4A2Q14240 407 aaKnown RBP10.15□□□□□ -0.78
USP16-204ENST00000399976 CHRNA2Q15822 529 aa10.14□□□□□ -0.79
USP16-204ENST00000399976 LARP1Q6PKG0 1096 aaKnown RBP10.14□□□□□ -0.79
USP16-204ENST00000399976 DDX10Q13206 875 aaKnown RBP10.14□□□□□ -0.79
USP16-204ENST00000399976 CCDC125Q86Z20 511 aa10.14□□□□□ -0.79
USP16-204ENST00000399976 PNNQ9H307 717 aaKnown RBP10.14□□□□□ -0.79
USP16-204ENST00000399976 IL2RBP14784 551 aa10.14□□□□□ -0.79
USP16-204ENST00000399976 MTHFSP49914 203 aa10.14□□□□□ -0.79
USP16-204ENST00000399976 RRS1Q15050 365 aaKnown RBP10.14□□□□□ -0.79
USP16-204ENST00000399976 DIAPH1O60610 1272 aaKnown RBP10.13□□□□□ -0.79
USP16-204ENST00000399976 HMGB2P26583 209 aaKnown RBP10.13□□□□□ -0.79
USP16-204ENST00000399976 BTAF1O14981 1849 aa10.13□□□□□ -0.79
USP16-204ENST00000399976 NKX1-1Q15270 411 aaPredicted RBP10.13□□□□□ -0.79
USP16-204ENST00000399976 HSP90AB2PQ58FF8 381 aa10.13□□□□□ -0.79
USP16-204ENST00000399976 TOM1L2Q6ZVM7 507 aa10.13□□□□□ -0.79
USP16-204ENST00000399976 AMOTQ4VCS5 1084 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms