RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 ANKRD36BQ8N2N9 1353 aa11.76□□□□□ -0.53
USP16-202ENST00000399973 OVOS2A0A0J9YW53 1432 aa11.76□□□□□ -0.53
USP16-202ENST00000399973 OVOS2Q6IE36 1432 aa11.76□□□□□ -0.53
USP16-202ENST00000399973 ABCC6O95255 1503 aa11.76□□□□□ -0.53
USP16-202ENST00000399973 KCNH5Q8NCM2 988 aa11.75□□□□□ -0.53
USP16-202ENST00000399973 PUS7Q96PZ0 661 aaKnown RBP11.75□□□□□ -0.53
USP16-202ENST00000399973 SPATA31A1Q5TZJ5 1347 aa11.75□□□□□ -0.53
USP16-202ENST00000399973 AATKQ6ZMQ8 1374 aa11.75□□□□□ -0.53
USP16-202ENST00000399973 FAM208AQ9UK61 1670 aaKnown RBP11.75□□□□□ -0.53
USP16-202ENST00000399973 TNS1Q9HBL0 1735 aaKnown RBP11.74□□□□□ -0.53
USP16-202ENST00000399973 CDCA8Q53HL2 280 aa11.74□□□□□ -0.53
USP16-202ENST00000399973 LARP1Q6PKG0 1096 aaKnown RBP11.74□□□□□ -0.53
USP16-202ENST00000399973 USP31Q70CQ4 1352 aa11.74□□□□□ -0.53
USP16-202ENST00000399973 CRB1P82279 1406 aa11.74□□□□□ -0.53
USP16-202ENST00000399973 ANKRD26Q9UPS8 1709 aa11.74□□□□□ -0.53
USP16-202ENST00000399973 EP400Q96L91 3159 aa11.73□□□□□ -0.53
USP16-202ENST00000399973 KRT27Q7Z3Y8 459 aa11.73□□□□□ -0.53
USP16-202ENST00000399973 HSPA5P11021 654 aaKnown RBP11.72□□□□□ -0.53
USP16-202ENST00000399973 EIF4G2P78344 907 aaKnown RBP eCLIP11.72□□□□□ -0.53
USP16-202ENST00000399973 PPP4R3CPQ6ZMV5 832 aa11.72□□□□□ -0.53
USP16-202ENST00000399973 RGPD2P0DJD1 1756 aa11.72□□□□□ -0.53
USP16-202ENST00000399973 CSB-PGBD3P0DP91 1061 aa11.71□□□□□ -0.53
USP16-202ENST00000399973 TOM1L2Q6ZVM7 507 aa11.71□□□□□ -0.53
USP16-202ENST00000399973 BLMP54132 1417 aaPredicted RBP11.7□□□□□ -0.54
USP16-202ENST00000399973 NSD3Q9BZ95 1437 aa11.7□□□□□ -0.54
USP16-202ENST00000399973 WDR17Q8IZU2 1322 aa11.7□□□□□ -0.54
USP16-202ENST00000399973 ONECUT3O60422 494 aaPredicted RBP11.7□□□□□ -0.54
USP16-202ENST00000399973 FAM182BQ5T319 152 aa11.7□□□□□ -0.54
USP16-202ENST00000399973 ARHGEF25Q86VW2 580 aa11.7□□□□□ -0.54
USP16-202ENST00000399973 TCP11L2Q8N4U5 519 aa11.7□□□□□ -0.54
USP16-202ENST00000399973 COG3Q96JB2 828 aa11.7□□□□□ -0.54
USP16-202ENST00000399973 AXIN2Q9Y2T1 843 aa11.69□□□□□ -0.54
USP16-202ENST00000399973 SF3B2Q13435 895 aaKnown RBP11.68□□□□□ -0.54
USP16-202ENST00000399973 PEAK1Q9H792 1746 aa11.68□□□□□ -0.54
USP16-202ENST00000399973 SBF2Q86WG5 1849 aa11.67□□□□□ -0.54
USP16-202ENST00000399973 PDE3BQ13370 1112 aa11.67□□□□□ -0.54
USP16-202ENST00000399973 BARGINQ6ZT62 677 aa11.67□□□□□ -0.54
USP16-202ENST00000399973 GGNBP2Q9H3C7 697 aa11.67□□□□□ -0.54
USP16-202ENST00000399973 THRAP3Q9Y2W1 955 aaKnown RBP11.66□□□□□ -0.54
USP16-202ENST00000399973 MAP2P11137 1827 aaKnown RBP11.65□□□□□ -0.54
USP16-202ENST00000399973 ERBB3P21860 1342 aa11.65□□□□□ -0.54
USP16-202ENST00000399973 CCDC125Q86Z20 511 aa11.65□□□□□ -0.54
USP16-202ENST00000399973 LTV1Q96GA3 475 aaPredicted RBP11.65□□□□□ -0.54
USP16-202ENST00000399973 CCDC7Q96M83 1385 aa11.65□□□□□ -0.55
USP16-202ENST00000399973 MAP3K19Q56UN5 1328 aa11.64□□□□□ -0.55
USP16-202ENST00000399973 OVOS2A0A0G2JMS6 1433 aa11.64□□□□□ -0.55
USP16-202ENST00000399973 TNS2Q63HR2 1409 aa11.64□□□□□ -0.55
USP16-202ENST00000399973 AMPHP49418 695 aa11.64□□□□□ -0.55
USP16-202ENST00000399973 DEFB132Q7Z7B7 95 aa11.64□□□□□ -0.55
USP16-202ENST00000399973 ANKRD24Q8TF21 1146 aa11.64□□□□□ -0.55
USP16-202ENST00000399973 NLRP2Q9NX02 1062 aa11.64□□□□□ -0.55
USP16-202ENST00000399973 RTL1A6NKG5 1358 aa11.64□□□□□ -0.55
USP16-202ENST00000399973 DISP2A7MBM2 1401 aa11.63□□□□□ -0.55
USP16-202ENST00000399973 RREB1Q92766 1687 aa11.63□□□□□ -0.55
USP16-202ENST00000399973 FYB1O15117 783 aa11.63□□□□□ -0.55
USP16-202ENST00000399973 FBLN1P23142 703 aa11.63□□□□□ -0.55
USP16-202ENST00000399973 RRS1Q15050 365 aaKnown RBP11.63□□□□□ -0.55
USP16-202ENST00000399973 DDB1Q16531 1140 aa11.63□□□□□ -0.55
USP16-202ENST00000399973 CARD10Q9BWT7 1032 aa11.63□□□□□ -0.55
USP16-202ENST00000399973 CARD14Q9BXL6 1004 aa11.63□□□□□ -0.55
USP16-202ENST00000399973 CGNL1Q0VF96 1302 aa11.62□□□□□ -0.55
USP16-202ENST00000399973 SMG6Q86US8 1419 aaKnown RBP11.62□□□□□ -0.55
USP16-202ENST00000399973 BAG6P46379 1132 aa11.62□□□□□ -0.55
USP16-202ENST00000399973 NUP188Q5SRE5 1749 aa11.62□□□□□ -0.55
USP16-202ENST00000399973 SHANK3Q9BYB0 1731 aa11.62□□□□□ -0.55
USP16-202ENST00000399973 NHSQ6T4R5 1651 aa11.62□□□□□ -0.55
USP16-202ENST00000399973 DOT1LQ8TEK3 1739 aa11.61□□□□□ -0.55
USP16-202ENST00000399973 TRIM37O94972 964 aa11.61□□□□□ -0.55
USP16-202ENST00000399973 HOXC9P31274 260 aa11.61□□□□□ -0.55
USP16-202ENST00000399973 FAM196AQ6ZSG2 479 aa11.61□□□□□ -0.55
USP16-202ENST00000399973 IP6K1Q92551 441 aa11.61□□□□□ -0.55
USP16-202ENST00000399973 RGPD3A6NKT7 1758 aaPredicted RBP11.61□□□□□ -0.55
USP16-202ENST00000399973 RGPD4Q7Z3J3 1758 aa11.61□□□□□ -0.55
USP16-202ENST00000399973 CDCA7Q9BWT1 371 aaPredicted RBP11.6□□□□□ -0.55
USP16-202ENST00000399973 FLT4P35916 1363 aa11.59□□□□□ -0.55
USP16-202ENST00000399973 C11orf95C9JLR9 678 aaPredicted RBP11.59□□□□□ -0.55
USP16-202ENST00000399973 KIF7Q2M1P5 1343 aa11.59□□□□□ -0.55
USP16-202ENST00000399973 BTAF1O14981 1849 aa11.58□□□□□ -0.56
USP16-202ENST00000399973 KAT6BQ8WYB5 2073 aa11.58□□□□□ -0.56
USP16-202ENST00000399973 PPM1GO15355 546 aaPredicted RBP11.58□□□□□ -0.56
USP16-202ENST00000399973 IL2RBP14784 551 aa11.58□□□□□ -0.56
USP16-202ENST00000399973 TNNT2P45379 298 aaPredicted RBP11.58□□□□□ -0.56
USP16-202ENST00000399973 EN1Q05925 392 aaPredicted RBP11.58□□□□□ -0.56
USP16-202ENST00000399973 PANK3Q9H999 370 aa11.58□□□□□ -0.56
USP16-202ENST00000399973 MEGF6O75095 1541 aa11.57□□□□□ -0.56
USP16-202ENST00000399973 APBA3O96018 575 aa11.57□□□□□ -0.56
USP16-202ENST00000399973 EMILIN1Q9Y6C2 1016 aa11.57□□□□□ -0.56
USP16-202ENST00000399973 NSD2O96028 1365 aa11.56□□□□□ -0.56
USP16-202ENST00000399973 INSRP06213 1382 aa11.56□□□□□ -0.56
USP16-202ENST00000399973 EXOC5O00471 708 aa11.56□□□□□ -0.56
USP16-202ENST00000399973 USHBP1Q8N6Y0 703 aa11.56□□□□□ -0.56
USP16-202ENST00000399973 MARCH10Q8NA82 808 aaPredicted RBP11.56□□□□□ -0.56
USP16-202ENST00000399973 KIF24Q5T7B8 1368 aa11.55□□□□□ -0.56
USP16-202ENST00000399973 PKD1L3Q7Z443 1732 aa11.55□□□□□ -0.56
USP16-202ENST00000399973 HSP90AB2PQ58FF8 381 aa11.55□□□□□ -0.56
USP16-202ENST00000399973 EZH2Q15910 746 aaKnown RBP11.54□□□□□ -0.56
USP16-202ENST00000399973 KNSTRNQ9Y448 316 aa11.54□□□□□ -0.56
USP16-202ENST00000399973 PSDA5PKW4 1024 aaPredicted RBP11.53□□□□□ -0.56
USP16-202ENST00000399973 PARD3Q8TEW0 1356 aa11.53□□□□□ -0.56
USP16-202ENST00000399973 CNGB1Q14028 1251 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms