RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 KIAA0586Q9BVV6 1533 aa3.92□□□□□ -1.78
KNL1-202ENST00000399668 ABCC5O15440 1437 aa3.92□□□□□ -1.78
KNL1-202ENST00000399668 CNTRLQ7Z7A1 2325 aa3.92□□□□□ -1.78
KNL1-202ENST00000399668 MYH14Q7Z406 1995 aaKnown RBP3.92□□□□□ -1.78
KNL1-202ENST00000399668 C20orf194Q5TEA3 1177 aa3.92□□□□□ -1.78
KNL1-202ENST00000399668 BACH2Q9BYV9 841 aa3.92□□□□□ -1.78
KNL1-202ENST00000399668 FAM13BQ9NYF5 915 aa3.92□□□□□ -1.78
KNL1-202ENST00000399668 MYO5BQ9ULV0 1848 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 TPM1P09493 284 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 FKBP4Q02790 459 aaKnown RBP eCLIP3.91□□□□□ -1.78
KNL1-202ENST00000399668 STK3Q13188 491 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 TOM1L2Q6ZVM7 507 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 CHD1LQ86WJ1 897 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 TMEM57Q8N5G2 664 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 CEP89Q96ST8 783 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 HOOK1Q9UJC3 728 aaKnown RBP3.91□□□□□ -1.78
KNL1-202ENST00000399668 NKTRP30414 1462 aaKnown RBP3.91□□□□□ -1.78
KNL1-202ENST00000399668 EIF4G3O43432 1585 aaKnown RBP3.91□□□□□ -1.78
KNL1-202ENST00000399668 LRRIQ1Q96JM4 1722 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 MAP3K1Q13233 1512 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 SYCP2Q9BX26 1530 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 WDR63Q8IWG1 891 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 SDF4Q9BRK5 362 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 RP1P56715 2156 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 ANKRD30BQ9BXX2 1392 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 EIF2AK4Q9P2K8 1649 aaKnown RBP3.91□□□□□ -1.78
KNL1-202ENST00000399668 CDC45O75419 566 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 FBLN1P23142 703 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 CABP4P57796 275 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 ZC3H6P61129 1189 aaKnown RBP3.91□□□□□ -1.78
KNL1-202ENST00000399668 MVPQ14764 893 aaKnown RBP3.91□□□□□ -1.78
KNL1-202ENST00000399668 HSP90AB4PQ58FF6 505 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 KLHL34Q8N239 644 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 RBM42Q9BTD8 480 aaKnown RBP3.91□□□□□ -1.78
KNL1-202ENST00000399668 FSD1Q9BTV5 496 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 LRRCC1Q9C099 1032 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 CNNM1Q9NRU3 951 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 CCDC61Q9Y6R9 512 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 PLEKHO1Q53GL0 409 aaPredicted RBP3.91□□□□□ -1.78
KNL1-202ENST00000399668 PROSER2Q86WR7 435 aaPredicted RBP3.91□□□□□ -1.78
KNL1-202ENST00000399668 THEMISQ8N1K5 641 aaPredicted RBP3.91□□□□□ -1.78
KNL1-202ENST00000399668 SPC24Q8NBT2 197 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 ZNF692Q9BU19 519 aaPredicted RBP3.91□□□□□ -1.78
KNL1-202ENST00000399668 PRM3Q9NNZ6 103 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 SPINK5Q9NQ38 1064 aaPredicted RBP3.91□□□□□ -1.78
KNL1-202ENST00000399668 CD109Q6YHK3 1445 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 NUTM2BA6NNL0 878 aaPredicted RBP3.91□□□□□ -1.78
KNL1-202ENST00000399668 NUTM2EB1AL46 878 aaPredicted RBP3.91□□□□□ -1.78
KNL1-202ENST00000399668 PRPF40AO75400 957 aaKnown RBP3.91□□□□□ -1.78
KNL1-202ENST00000399668 GNAI3P08754 354 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 CWC27Q6UX04 472 aaKnown RBP3.91□□□□□ -1.78
KNL1-202ENST00000399668 MCM10Q7L590 875 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 NUTM2AQ8IVF1 878 aaPredicted RBP3.91□□□□□ -1.78
KNL1-202ENST00000399668 MPNDQ8N594 471 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 FMNL2Q96PY5 1086 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 SPHKAPQ2M3C7 1700 aa3.91□□□□□ -1.78
KNL1-202ENST00000399668 NCOA1Q15788 1441 aa3.9□□□□□ -1.78
KNL1-202ENST00000399668 UGGT2Q9NYU1 1516 aa3.9□□□□□ -1.78
KNL1-202ENST00000399668 ATP2B1P20020 1258 aa3.9□□□□□ -1.78
KNL1-202ENST00000399668 SAFBQ15424 915 aaKnown RBP eCLIP3.9□□□□□ -1.784e-6■■□□□ 12.7
KNL1-202ENST00000399668 NUDT16Q96DE0 195 aaKnown RBP3.9□□□□□ -1.78
KNL1-202ENST00000399668 ADGRL1O94910 1474 aa3.9□□□□□ -1.78
KNL1-202ENST00000399668 RPRD2Q5VT52 1461 aaKnown RBP3.9□□□□□ -1.78
KNL1-202ENST00000399668 DNMT1P26358 1616 aaKnown RBP3.9□□□□□ -1.78
KNL1-202ENST00000399668 KIF20BQ96Q89 1820 aa3.9□□□□□ -1.78
KNL1-202ENST00000399668 FIBPO43427 364 aa3.9□□□□□ -1.78
KNL1-202ENST00000399668 TPM2P07951 284 aa3.9□□□□□ -1.78
KNL1-202ENST00000399668 CHMP4CQ96CF2 233 aa3.9□□□□□ -1.78
KNL1-202ENST00000399668 FANCAO15360 1455 aa3.9□□□□□ -1.78
KNL1-202ENST00000399668 SRGAP3O43295 1099 aa3.9□□□□□ -1.78
KNL1-202ENST00000399668 PSMA5P28066 241 aa3.9□□□□□ -1.78
KNL1-202ENST00000399668 CCDC85AQ96PX6 553 aaPredicted RBP3.9□□□□□ -1.78
KNL1-202ENST00000399668 IFT57Q9NWB7 429 aa3.9□□□□□ -1.78
KNL1-202ENST00000399668 EXOC6BQ9Y2D4 811 aa3.9□□□□□ -1.78
KNL1-202ENST00000399668 PTCD1O75127 700 aaKnown RBP3.9□□□□□ -1.79
KNL1-202ENST00000399668 PIP4K2BP78356 416 aa3.9□□□□□ -1.79
KNL1-202ENST00000399668 TTLL5Q6EMB2 1281 aa3.9□□□□□ -1.79
KNL1-202ENST00000399668 PHF23Q9BUL5 403 aaPredicted RBP3.9□□□□□ -1.79
KNL1-202ENST00000399668 ATP2B2Q01814 1243 aa3.9□□□□□ -1.79
KNL1-202ENST00000399668 IKQ13123 557 aaPredicted RBP3.9□□□□□ -1.79
KNL1-202ENST00000399668 ZNF530Q6P9A1 599 aaPredicted RBP3.9□□□□□ -1.79
KNL1-202ENST00000399668 CEP152O94986 1710 aa3.9□□□□□ -1.79
KNL1-202ENST00000399668 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.9□□□□□ -1.79
KNL1-202ENST00000399668 GNAT3A8MTJ3 354 aa3.9□□□□□ -1.79
KNL1-202ENST00000399668 TATP17735 454 aaPredicted RBP3.9□□□□□ -1.79
KNL1-202ENST00000399668 TNNT3P45378 269 aaPredicted RBP3.9□□□□□ -1.79
KNL1-202ENST00000399668 CCDC57Q2TAC2 916 aa3.9□□□□□ -1.79
KNL1-202ENST00000399668 AEBP2Q6ZN18 517 aaPredicted RBP3.9□□□□□ -1.79
KNL1-202ENST00000399668 FAM43AQ8N2R8 423 aa3.9□□□□□ -1.79
KNL1-202ENST00000399668 RSPH6AQ9H0K4 717 aa3.9□□□□□ -1.79
KNL1-202ENST00000399668 IL1RAPL2Q9NP60 686 aa3.9□□□□□ -1.79
KNL1-202ENST00000399668 CCT4P50991 539 aaKnown RBP3.89□□□□□ -1.79
KNL1-202ENST00000399668 SLFN5Q08AF3 891 aa3.89□□□□□ -1.79
KNL1-202ENST00000399668 AAMPQ13685 434 aa3.89□□□□□ -1.79
KNL1-202ENST00000399668 GCC1Q96CN9 775 aa3.89□□□□□ -1.79
KNL1-202ENST00000399668 ABCA5Q8WWZ7 1642 aa3.89□□□□□ -1.79
KNL1-202ENST00000399668 MAPKBP1O60336 1514 aa3.89□□□□□ -1.79
KNL1-202ENST00000399668 USHBP1Q8N6Y0 703 aa3.89□□□□□ -1.79
KNL1-202ENST00000399668 BRPF3Q9ULD4 1205 aa3.89□□□□□ -1.79
KNL1-202ENST00000399668 SMARCA5O60264 1052 aaPredicted RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms