RNA–Protein interactions for RNA: ENST00000399273.5

CCDC144A-206, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC144A, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-206ENST00000399273 SKIDA1Q1XH10 827 aa13.74□□□□□ -0.21
CCDC144A-206ENST00000399273 STK38Q15208 465 aa13.74□□□□□ -0.21
CCDC144A-206ENST00000399273 EXOC6Q8TAG9 804 aa13.73□□□□□ -0.21
CCDC144A-206ENST00000399273 TRIM5Q9C035 493 aa13.73□□□□□ -0.21
CCDC144A-206ENST00000399273 PRKRIP1Q9H875 184 aaPredicted RBP13.73□□□□□ -0.21
CCDC144A-206ENST00000399273 ANKLE2Q86XL3 938 aa13.73□□□□□ -0.21
CCDC144A-206ENST00000399273 ZPR1O75312 459 aa13.73□□□□□ -0.21
CCDC144A-206ENST00000399273 TDO2P48775 406 aa13.73□□□□□ -0.21
CCDC144A-206ENST00000399273 MYL6BP14649 208 aa13.73□□□□□ -0.21
CCDC144A-206ENST00000399273 IGHMBP2P38935 993 aaKnown RBP13.73□□□□□ -0.21
CCDC144A-206ENST00000399273 CCDC39Q9UFE4 941 aa13.73□□□□□ -0.21
CCDC144A-206ENST00000399273 PRDM11Q9NQV5 511 aa13.73□□□□□ -0.21
CCDC144A-206ENST00000399273 CCT4P50991 539 aaKnown RBP13.73□□□□□ -0.21
CCDC144A-206ENST00000399273 HDGFL1Q5TGJ6 251 aa13.72□□□□□ -0.21
CCDC144A-206ENST00000399273 PAXIP1Q6ZW49 1069 aaPredicted RBP13.72□□□□□ -0.21
CCDC144A-206ENST00000399273 CCDC181Q5TID7 509 aa13.72□□□□□ -0.21
CCDC144A-206ENST00000399273 STARD3NLO95772 234 aa13.72□□□□□ -0.21
CCDC144A-206ENST00000399273 RABEP1Q15276 862 aa13.72□□□□□ -0.21
CCDC144A-206ENST00000399273 PPFIBP1Q86W92 1011 aa13.72□□□□□ -0.21
CCDC144A-206ENST00000399273 UBAC1Q9BSL1 405 aa13.72□□□□□ -0.21
CCDC144A-206ENST00000399273 ZNF692Q9BU19 519 aaPredicted RBP13.72□□□□□ -0.21
CCDC144A-206ENST00000399273 STK11IPQ8N1F8 1099 aa13.72□□□□□ -0.21
CCDC144A-206ENST00000399273 SEPT11Q9NVA2 429 aaKnown RBP13.71□□□□□ -0.21
CCDC144A-206ENST00000399273 SEC63Q9UGP8 760 aaKnown RBP13.71□□□□□ -0.21
CCDC144A-206ENST00000399273 CCDC7Q96M83 1385 aa13.71□□□□□ -0.21
CCDC144A-206ENST00000399273 PPP1R12BO60237 982 aaPredicted RBP13.71□□□□□ -0.21
CCDC144A-206ENST00000399273 NUP133Q8WUM0 1156 aa13.71□□□□□ -0.21
CCDC144A-206ENST00000399273 FKBP4Q02790 459 aaKnown RBP eCLIP13.71□□□□□ -0.21
CCDC144A-206ENST00000399273 IQCEQ6IPM2 695 aa13.71□□□□□ -0.21
CCDC144A-206ENST00000399273 FAM13BQ9NYF5 915 aa13.71□□□□□ -0.21
CCDC144A-206ENST00000399273 IBSPP21815 317 aaPredicted RBP13.71□□□□□ -0.22
CCDC144A-206ENST00000399273 TTLL12Q14166 644 aaPredicted RBP13.71□□□□□ -0.22
CCDC144A-206ENST00000399273 ANKRD50Q9ULJ7 1429 aa13.7□□□□□ -0.22
CCDC144A-206ENST00000399273 SCLT1Q96NL6 688 aa13.7□□□□□ -0.22
CCDC144A-206ENST00000399273 LRP2BPQ9P2M1 347 aa13.7□□□□□ -0.22
CCDC144A-206ENST00000399273 SERPINC1P01008 464 aa13.7□□□□□ -0.22
CCDC144A-206ENST00000399273 DRC1Q96MC2 740 aa13.7□□□□□ -0.22
CCDC144A-206ENST00000399273 EPRSP07814 1512 aaKnown RBP13.7□□□□□ -0.22
CCDC144A-206ENST00000399273 ERICH3Q5RHP9 1530 aa13.7□□□□□ -0.22
CCDC144A-206ENST00000399273 BTBD11A6QL63 1104 aa13.69□□□□□ -0.22
CCDC144A-206ENST00000399273 NASPP49321 788 aaPredicted RBP13.69□□□□□ -0.22
CCDC144A-206ENST00000399273 AXDND1Q5T1B0 1012 aaPredicted RBP13.69□□□□□ -0.22
CCDC144A-206ENST00000399273 TMEM132EQ6IEE7 984 aa13.69□□□□□ -0.22
CCDC144A-206ENST00000399273 CCDC150Q8NCX0 1101 aa13.69□□□□□ -0.22
CCDC144A-206ENST00000399273 GOLGA6L7A0A1B0GV03 622 aa13.69□□□□□ -0.22
CCDC144A-206ENST00000399273 AEBP1Q8IUX7 1158 aa13.69□□□□□ -0.22
CCDC144A-206ENST00000399273 CYP46A1Q9Y6A2 500 aa13.69□□□□□ -0.22
CCDC144A-206ENST00000399273 MBD3O95983 291 aa13.69□□□□□ -0.22
CCDC144A-206ENST00000399273 CT47B1P0C2W7 299 aaPredicted RBP13.69□□□□□ -0.22
CCDC144A-206ENST00000399273 PRAM1Q96QH2 718 aa13.69□□□□□ -0.22
CCDC144A-206ENST00000399273 ZNF530Q6P9A1 599 aaPredicted RBP13.69□□□□□ -0.22
CCDC144A-206ENST00000399273 SIL1Q9H173 461 aa13.69□□□□□ -0.22
CCDC144A-206ENST00000399273 FMNL2Q96PY5 1086 aa13.68□□□□□ -0.22
CCDC144A-206ENST00000399273 WASF1Q92558 559 aa13.68□□□□□ -0.22
CCDC144A-206ENST00000399273 LRRCC1Q9C099 1032 aa13.68□□□□□ -0.22
CCDC144A-206ENST00000399273 CTNNA3Q9UI47 895 aa13.68□□□□□ -0.22
CCDC144A-206ENST00000399273 CEBPZQ03701 1054 aaKnown RBP13.68□□□□□ -0.22
CCDC144A-206ENST00000399273 GRIN2BQ13224 1484 aa13.68□□□□□ -0.22
CCDC144A-206ENST00000399273 SRCIN1Q9C0H9 1055 aa13.68□□□□□ -0.22
CCDC144A-206ENST00000399273 ANAPC15P60006 121 aa13.68□□□□□ -0.22
CCDC144A-206ENST00000399273 FGD6Q6ZV73 1430 aa13.68□□□□□ -0.22
CCDC144A-206ENST00000399273 ANKIB1Q9P2G1 1089 aa13.67□□□□□ -0.22
CCDC144A-206ENST00000399273 SSBP05455 408 aaKnown RBP eCLIP13.67□□□□□ -0.22
CCDC144A-206ENST00000399273 CETN2P41208 172 aa13.67□□□□□ -0.22
CCDC144A-206ENST00000399273 ME1P48163 572 aa13.67□□□□□ -0.22
CCDC144A-206ENST00000399273 TWISTNBQ3B726 338 aaPredicted RBP13.67□□□□□ -0.22
CCDC144A-206ENST00000399273 JAKMIP3Q5VZ66 844 aa13.67□□□□□ -0.22
CCDC144A-206ENST00000399273 RAI14Q9P0K7 980 aa13.67□□□□□ -0.22
CCDC144A-206ENST00000399273 USP5P45974 858 aa13.67□□□□□ -0.22
CCDC144A-206ENST00000399273 CEP57L1Q8IYX8 460 aa13.67□□□□□ -0.22
CCDC144A-206ENST00000399273 CRACR2BQ8N4Y2 399 aaPredicted RBP13.67□□□□□ -0.22
CCDC144A-206ENST00000399273 PRKAR2BP31323 418 aa13.67□□□□□ -0.22
CCDC144A-206ENST00000399273 EHBP1L1Q8N3D4 1523 aa13.67□□□□□ -0.22
CCDC144A-206ENST00000399273 PANK1Q8TE04 598 aa13.66□□□□□ -0.22
CCDC144A-206ENST00000399273 CEP131Q9UPN4 1083 aa13.66□□□□□ -0.22
CCDC144A-206ENST00000399273 CAVIN4Q5BKX8 364 aa13.66□□□□□ -0.22
CCDC144A-206ENST00000399273 LEKR1Q6ZMV7 388 aa13.66□□□□□ -0.22
CCDC144A-206ENST00000399273 TSPY26PQ9H489 355 aa13.66□□□□□ -0.22
CCDC144A-206ENST00000399273 RTEL1-TNFRSF6BF6WH68 1400 aa13.66□□□□□ -0.22
CCDC144A-206ENST00000399273 SSR1P43307 286 aaKnown RBP13.66□□□□□ -0.22
CCDC144A-206ENST00000399273 GCC1Q96CN9 775 aa13.66□□□□□ -0.22
CCDC144A-206ENST00000399273 CDK19Q9BWU1 502 aa13.66□□□□□ -0.22
CCDC144A-206ENST00000399273 NEK4P51957 841 aa13.66□□□□□ -0.22
CCDC144A-206ENST00000399273 CBFA2T2O43439 604 aa13.65□□□□□ -0.22
CCDC144A-206ENST00000399273 FAM43AQ8N2R8 423 aa13.65□□□□□ -0.22
CCDC144A-206ENST00000399273 ZNF397Q8NF99 534 aaPredicted RBP13.65□□□□□ -0.22
CCDC144A-206ENST00000399273 TSPYL1Q9H0U9 437 aa13.65□□□□□ -0.22
CCDC144A-206ENST00000399273 EHMT1Q9H9B1 1298 aa13.65□□□□□ -0.22
CCDC144A-206ENST00000399273 CHMP4BP1P59074 171 aa13.65□□□□□ -0.22
CCDC144A-206ENST00000399273 MYCNP04198 464 aaPredicted RBP13.65□□□□□ -0.22
CCDC144A-206ENST00000399273 SLF2Q8IX21 1173 aa13.65□□□□□ -0.22
CCDC144A-206ENST00000399273 SLC4A2P04920 1241 aa13.65□□□□□ -0.23
CCDC144A-206ENST00000399273 BICDL1Q6ZP65 573 aa13.65□□□□□ -0.23
CCDC144A-206ENST00000399273 BRD4O60885 1362 aaPredicted RBP13.64□□□□□ -0.23
CCDC144A-206ENST00000399273 RPGRQ92834 1020 aaKnown RBP13.64□□□□□ -0.23
CCDC144A-206ENST00000399273 CCDC112Q8NEF3 446 aa13.64□□□□□ -0.23
CCDC144A-206ENST00000399273 CCDC91Q7Z6B0 441 aa13.64□□□□□ -0.23
CCDC144A-206ENST00000399273 CFAP45Q9UL16 551 aa13.64□□□□□ -0.23
CCDC144A-206ENST00000399273 CCDC192P0DO97 292 aa13.63□□□□□ -0.23
CCDC144A-206ENST00000399273 CEP126Q9P2H0 1117 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms