RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.98■□□□□ 0.31
HLA-DQB1-203ENST00000399082 MEX3CQ5U5Q3 659 aaKnown RBP16.97■□□□□ 0.31
HLA-DQB1-203ENST00000399082 FNBP4Q8N3X1 1017 aaPredicted RBP16.97■□□□□ 0.31
HLA-DQB1-203ENST00000399082 RNF216Q9NWF9 866 aaPredicted RBP16.97■□□□□ 0.31
HLA-DQB1-203ENST00000399082 RGS17Q9UGC6 210 aaPredicted RBP16.97■□□□□ 0.31
HLA-DQB1-203ENST00000399082 MAP2P11137 1827 aaKnown RBP16.97■□□□□ 0.31
HLA-DQB1-203ENST00000399082 AFF2P51816 1311 aa16.96■□□□□ 0.31
HLA-DQB1-203ENST00000399082 SMG6Q86US8 1419 aaKnown RBP16.96■□□□□ 0.31
HLA-DQB1-203ENST00000399082 RRS1Q15050 365 aaKnown RBP16.96■□□□□ 0.31
HLA-DQB1-203ENST00000399082 MORC1Q86VD1 984 aa16.96■□□□□ 0.31
HLA-DQB1-203ENST00000399082 AXIN2Q9Y2T1 843 aa16.96■□□□□ 0.31
HLA-DQB1-203ENST00000399082 TNNT2P45379 298 aaPredicted RBP16.95■□□□□ 0.3
HLA-DQB1-203ENST00000399082 CNGB1Q14028 1251 aaPredicted RBP16.95■□□□□ 0.3
HLA-DQB1-203ENST00000399082 NGLY1Q96IV0 654 aa16.95■□□□□ 0.3
HLA-DQB1-203ENST00000399082 PARD3Q8TEW0 1356 aa16.94■□□□□ 0.3
HLA-DQB1-203ENST00000399082 POLKQ9UBT6 870 aa16.94■□□□□ 0.3
HLA-DQB1-203ENST00000399082 EMILIN1Q9Y6C2 1016 aa16.94■□□□□ 0.3
HLA-DQB1-203ENST00000399082 COL5A2P05997 1499 aaPredicted RBP16.93■□□□□ 0.3
HLA-DQB1-203ENST00000399082 ZBTB7CA1YPR0 619 aa16.93■□□□□ 0.3
HLA-DQB1-203ENST00000399082 BTG4Q9NY30 223 aa16.93■□□□□ 0.3
HLA-DQB1-203ENST00000399082 RTL1A6NKG5 1358 aa16.92■□□□□ 0.3
HLA-DQB1-203ENST00000399082 ATRNO75882 1429 aa16.91■□□□□ 0.3
HLA-DQB1-203ENST00000399082 HOXC9P31274 260 aa16.91■□□□□ 0.3
HLA-DQB1-203ENST00000399082 IP6K1Q92551 441 aa16.91■□□□□ 0.3
HLA-DQB1-203ENST00000399082 BLMP54132 1417 aaPredicted RBP16.9■□□□□ 0.3
HLA-DQB1-203ENST00000399082 UNC5CLQ8IV45 518 aa16.9■□□□□ 0.3
HLA-DQB1-203ENST00000399082 USP21Q9UK80 565 aa16.9■□□□□ 0.3
HLA-DQB1-203ENST00000399082 FLT4P35916 1363 aa16.89■□□□□ 0.3
HLA-DQB1-203ENST00000399082 KIF24Q5T7B8 1368 aa16.89■□□□□ 0.3
HLA-DQB1-203ENST00000399082 CDK12Q9NYV4 1490 aaPredicted RBP16.89■□□□□ 0.29
HLA-DQB1-203ENST00000399082 GLI3P10071 1580 aa16.89■□□□□ 0.29
HLA-DQB1-203ENST00000399082 AMPHP49418 695 aa16.88■□□□□ 0.29
HLA-DQB1-203ENST00000399082 HSP90AB2PQ58FF8 381 aa16.88■□□□□ 0.29
HLA-DQB1-203ENST00000399082 POTEAQ6S8J7 498 aa16.88■□□□□ 0.29
HLA-DQB1-203ENST00000399082 ERBB3P21860 1342 aa16.88■□□□□ 0.29
HLA-DQB1-203ENST00000399082 INSRP06213 1382 aa16.88■□□□□ 0.29
HLA-DQB1-203ENST00000399082 COL3A1P02461 1466 aaPredicted RBP16.87■□□□□ 0.29
HLA-DQB1-203ENST00000399082 RGPD2P0DJD1 1756 aa16.87■□□□□ 0.29
HLA-DQB1-203ENST00000399082 PPP2R1AP30153 589 aa16.86■□□□□ 0.29
HLA-DQB1-203ENST00000399082 LARP1Q6PKG0 1096 aaKnown RBP16.86■□□□□ 0.29
HLA-DQB1-203ENST00000399082 STRN4Q9NRL3 753 aa16.86■□□□□ 0.29
HLA-DQB1-203ENST00000399082 FAM208AQ9UK61 1670 aaKnown RBP16.85■□□□□ 0.29
HLA-DQB1-203ENST00000399082 MTHFSP49914 203 aa16.85■□□□□ 0.29
HLA-DQB1-203ENST00000399082 VPS72Q15906 364 aa16.85■□□□□ 0.29
HLA-DQB1-203ENST00000399082 ZNF772Q68DY9 489 aaPredicted RBP16.85■□□□□ 0.29
HLA-DQB1-203ENST00000399082 ANKRD24Q8TF21 1146 aa16.85■□□□□ 0.29
HLA-DQB1-203ENST00000399082 PRKRIP1Q9H875 184 aaPredicted RBP16.85■□□□□ 0.29
HLA-DQB1-203ENST00000399082 WDR17Q8IZU2 1322 aa16.85■□□□□ 0.29
HLA-DQB1-203ENST00000399082 PPM1GO15355 546 aaPredicted RBP16.84■□□□□ 0.29
HLA-DQB1-203ENST00000399082 CRB1P82279 1406 aa16.83■□□□□ 0.28
HLA-DQB1-203ENST00000399082 RALBP1Q15311 655 aa16.83■□□□□ 0.28
HLA-DQB1-203ENST00000399082 SPATA31A5Q5VU36 1347 aa16.83■□□□□ 0.28
HLA-DQB1-203ENST00000399082 SPATA31A7Q8IWB4 1347 aa16.83■□□□□ 0.28
HLA-DQB1-203ENST00000399082 QTRT2Q9H974 415 aaKnown RBP16.83■□□□□ 0.28
HLA-DQB1-203ENST00000399082 TRPC5Q9UL62 973 aaPredicted RBP16.83■□□□□ 0.28
HLA-DQB1-203ENST00000399082 WNK3Q9BYP7 1800 aa16.82■□□□□ 0.28
HLA-DQB1-203ENST00000399082 RGPD1P0DJD0 1748 aa16.82■□□□□ 0.28
HLA-DQB1-203ENST00000399082 SPATA31A1Q5TZJ5 1347 aa16.82■□□□□ 0.28
HLA-DQB1-203ENST00000399082 LTV1Q96GA3 475 aaPredicted RBP16.82■□□□□ 0.28
HLA-DQB1-203ENST00000399082 NCAPD2Q15021 1401 aa16.81■□□□□ 0.28
HLA-DQB1-203ENST00000399082 EVA1CP58658 441 aa16.81■□□□□ 0.28
HLA-DQB1-203ENST00000399082 EIF4A2Q14240 407 aaKnown RBP16.81■□□□□ 0.28
HLA-DQB1-203ENST00000399082 GJD4Q96KN9 370 aaPredicted RBP16.81■□□□□ 0.28
HLA-DQB1-203ENST00000399082 THSD7AQ9UPZ6 1657 aa16.8■□□□□ 0.28
HLA-DQB1-203ENST00000399082 MYBBP1AQ9BQG0 1328 aaKnown RBP16.79■□□□□ 0.28
HLA-DQB1-203ENST00000399082 NBPF6Q5VWK0 638 aa16.79■□□□□ 0.28
HLA-DQB1-203ENST00000399082 NBPF4Q96M43 638 aa16.79■□□□□ 0.28
HLA-DQB1-203ENST00000399082 DISP2A7MBM2 1401 aa16.79■□□□□ 0.28
HLA-DQB1-203ENST00000399082 CSB-PGBD3P0DP91 1061 aa16.78■□□□□ 0.28
HLA-DQB1-203ENST00000399082 IL13P35225 146 aa16.78■□□□□ 0.28
HLA-DQB1-203ENST00000399082 TOM1L2Q6ZVM7 507 aa16.78■□□□□ 0.28
HLA-DQB1-203ENST00000399082 CARD10Q9BWT7 1032 aa16.78■□□□□ 0.28
HLA-DQB1-203ENST00000399082 NLRP2Q9NX02 1062 aa16.77■□□□□ 0.28
HLA-DQB1-203ENST00000399082 USP35Q9P2H5 1018 aa16.77■□□□□ 0.28
HLA-DQB1-203ENST00000399082 RGS12O14924 1447 aa16.77■□□□□ 0.27
HLA-DQB1-203ENST00000399082 RBM6P78332 1123 aaKnown RBP16.76■□□□□ 0.27
HLA-DQB1-203ENST00000399082 USHBP1Q8N6Y0 703 aa16.76■□□□□ 0.27
HLA-DQB1-203ENST00000399082 EYA1Q99502 592 aa16.76■□□□□ 0.27
HLA-DQB1-203ENST00000399082 CCDC9Q9Y3X0 531 aaKnown RBP16.76■□□□□ 0.27
HLA-DQB1-203ENST00000399082 IGSF1Q8N6C5 1336 aa16.75■□□□□ 0.27
HLA-DQB1-203ENST00000399082 ONECUT3O60422 494 aaPredicted RBP16.75■□□□□ 0.27
HLA-DQB1-203ENST00000399082 TCP11L2Q8N4U5 519 aa16.75■□□□□ 0.27
HLA-DQB1-203ENST00000399082 PARP4Q9UKK3 1724 aaKnown RBP16.75■□□□□ 0.27
HLA-DQB1-203ENST00000399082 MEGF6O75095 1541 aa16.75■□□□□ 0.27
HLA-DQB1-203ENST00000399082 LRRC37A3O60309 1634 aa16.74■□□□□ 0.27
HLA-DQB1-203ENST00000399082 RXRBP28702 533 aa16.74■□□□□ 0.27
HLA-DQB1-203ENST00000399082 C1QBPQ07021 282 aaKnown RBP16.74■□□□□ 0.27
HLA-DQB1-203ENST00000399082 FAM98CQ17RN3 349 aaKnown RBP16.74■□□□□ 0.27
HLA-DQB1-203ENST00000399082 BARGINQ6ZT62 677 aa16.74■□□□□ 0.27
HLA-DQB1-203ENST00000399082 BRWD3Q6RI45 1802 aa16.73■□□□□ 0.27
HLA-DQB1-203ENST00000399082 ANP32CO43423 234 aa16.73■□□□□ 0.27
HLA-DQB1-203ENST00000399082 CCDC184Q52MB2 194 aa16.73■□□□□ 0.27
HLA-DQB1-203ENST00000399082 THRAP3Q9Y2W1 955 aaKnown RBP16.73■□□□□ 0.27
HLA-DQB1-203ENST00000399082 DIAPH1O60610 1272 aaKnown RBP16.72■□□□□ 0.27
HLA-DQB1-203ENST00000399082 SHANK3Q9BYB0 1731 aa16.72■□□□□ 0.27
HLA-DQB1-203ENST00000399082 AEBP1Q8IUX7 1158 aa16.71■□□□□ 0.27
HLA-DQB1-203ENST00000399082 KDRP35968 1356 aa16.71■□□□□ 0.27
HLA-DQB1-203ENST00000399082 DIEXFQ68CQ4 756 aaKnown RBP16.7■□□□□ 0.26
HLA-DQB1-203ENST00000399082 CFAP53Q96M91 514 aa16.7■□□□□ 0.26
HLA-DQB1-203ENST00000399082 OVOS2A0A0G2JMS6 1433 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms