RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 USP19O94966 1318 aa11.99□□□□□ -0.49
BRCC3-206ENST00000399042 SPATA31A6Q5VVP1 1343 aa11.99□□□□□ -0.49
BRCC3-206ENST00000399042 OVOS2A0A0J9YW53 1432 aa11.98□□□□□ -0.49
BRCC3-206ENST00000399042 OVOS2Q6IE36 1432 aa11.98□□□□□ -0.49
BRCC3-206ENST00000399042 CHRNA2Q15822 529 aa11.98□□□□□ -0.49
BRCC3-206ENST00000399042 MIER1Q8N108 512 aa11.98□□□□□ -0.49
BRCC3-206ENST00000399042 NGLY1Q96IV0 654 aa11.98□□□□□ -0.49
BRCC3-206ENST00000399042 EMILIN1Q9Y6C2 1016 aa11.98□□□□□ -0.49
BRCC3-206ENST00000399042 PARD3Q8TEW0 1356 aa11.97□□□□□ -0.49
BRCC3-206ENST00000399042 KIAA0232Q92628 1395 aa11.97□□□□□ -0.49
BRCC3-206ENST00000399042 MAP3K19Q56UN5 1328 aa11.97□□□□□ -0.49
BRCC3-206ENST00000399042 C8orf37Q96NL8 207 aa11.97□□□□□ -0.49
BRCC3-206ENST00000399042 MRS2Q9HD23 443 aa11.97□□□□□ -0.49
BRCC3-206ENST00000399042 POLKQ9UBT6 870 aa11.97□□□□□ -0.49
BRCC3-206ENST00000399042 ARHGEF25Q86VW2 580 aa11.96□□□□□ -0.49
BRCC3-206ENST00000399042 NUDCQ9Y266 331 aa11.96□□□□□ -0.49
BRCC3-206ENST00000399042 TRPM3Q9HCF6 1732 aaPredicted RBP11.96□□□□□ -0.49
BRCC3-206ENST00000399042 PIK3C2AO00443 1686 aa11.96□□□□□ -0.5
BRCC3-206ENST00000399042 COL16A1Q07092 1604 aaPredicted RBP11.96□□□□□ -0.5
BRCC3-206ENST00000399042 NRKQ7Z2Y5 1582 aa11.96□□□□□ -0.5
BRCC3-206ENST00000399042 AATKQ6ZMQ8 1374 aa11.95□□□□□ -0.5
BRCC3-206ENST00000399042 U2SURPO15042 1029 aaKnown RBP11.95□□□□□ -0.5
BRCC3-206ENST00000399042 IP6K1Q92551 441 aa11.95□□□□□ -0.5
BRCC3-206ENST00000399042 STRN4Q9NRL3 753 aa11.95□□□□□ -0.5
BRCC3-206ENST00000399042 CCDC9Q9Y3X0 531 aaKnown RBP11.95□□□□□ -0.5
BRCC3-206ENST00000399042 KIF20BQ96Q89 1820 aa11.95□□□□□ -0.5
BRCC3-206ENST00000399042 FAM83GA6ND36 823 aa11.94□□□□□ -0.5
BRCC3-206ENST00000399042 DIAPH1O60610 1272 aaKnown RBP11.94□□□□□ -0.5
BRCC3-206ENST00000399042 HOXC9P31274 260 aa11.94□□□□□ -0.5
BRCC3-206ENST00000399042 WDR43Q15061 677 aaKnown RBP eCLIP11.94□□□□□ -0.5
BRCC3-206ENST00000399042 HSP90AB2PQ58FF8 381 aa11.94□□□□□ -0.5
BRCC3-206ENST00000399042 POTEHQ6S545 545 aa11.94□□□□□ -0.5
BRCC3-206ENST00000399042 BTG4Q9NY30 223 aa11.94□□□□□ -0.5
BRCC3-206ENST00000399042 FLT4P35916 1363 aa11.93□□□□□ -0.5
BRCC3-206ENST00000399042 ILDR1Q86SU0 546 aaPredicted RBP11.93□□□□□ -0.5
BRCC3-206ENST00000399042 ALS2Q96Q42 1657 aa11.93□□□□□ -0.5
BRCC3-206ENST00000399042 SMG6Q86US8 1419 aaKnown RBP11.93□□□□□ -0.5
BRCC3-206ENST00000399042 MED1Q15648 1581 aaPredicted RBP11.92□□□□□ -0.5
BRCC3-206ENST00000399042 ANKRD24Q8TF21 1146 aa11.92□□□□□ -0.5
BRCC3-206ENST00000399042 NLRP2Q9NX02 1062 aa11.92□□□□□ -0.5
BRCC3-206ENST00000399042 SSUH2Q9Y2M2 353 aa11.92□□□□□ -0.5
BRCC3-206ENST00000399042 CPDO75976 1380 aa11.92□□□□□ -0.5
BRCC3-206ENST00000399042 CCER2I3L3R5 266 aa11.91□□□□□ -0.5
BRCC3-206ENST00000399042 U2AF1L5P0DN76 240 aaPredicted RBP11.91□□□□□ -0.5
BRCC3-206ENST00000399042 U2AF1Q01081 240 aaKnown RBP eCLIP11.91□□□□□ -0.5
BRCC3-206ENST00000399042 TOM1L2Q6ZVM7 507 aa11.91□□□□□ -0.5
BRCC3-206ENST00000399042 AKT1S1Q96B36 256 aa11.91□□□□□ -0.5
BRCC3-206ENST00000399042 RTL1A6NKG5 1358 aa11.91□□□□□ -0.5
BRCC3-206ENST00000399042 SLIT3O75094 1523 aa11.91□□□□□ -0.5
BRCC3-206ENST00000399042 NEFMP07197 916 aa11.9□□□□□ -0.5
BRCC3-206ENST00000399042 FAM9BQ8IZU0 186 aa11.9□□□□□ -0.5
BRCC3-206ENST00000399042 USP35Q9P2H5 1018 aa11.9□□□□□ -0.5
BRCC3-206ENST00000399042 USP21Q9UK80 565 aa11.9□□□□□ -0.5
BRCC3-206ENST00000399042 AXIN2Q9Y2T1 843 aa11.9□□□□□ -0.5
BRCC3-206ENST00000399042 KIF24Q5T7B8 1368 aa11.9□□□□□ -0.5
BRCC3-206ENST00000399042 SPDYE4A6NLX3 237 aa11.89□□□□□ -0.51
BRCC3-206ENST00000399042 EIF4A2Q14240 407 aaKnown RBP11.89□□□□□ -0.51
BRCC3-206ENST00000399042 INSRP06213 1382 aa11.89□□□□□ -0.51
BRCC3-206ENST00000399042 NFAT5O94916 1531 aa11.88□□□□□ -0.51
BRCC3-206ENST00000399042 SHPRHQ149N8 1683 aa11.87□□□□□ -0.51
BRCC3-206ENST00000399042 AFF2P51816 1311 aa11.87□□□□□ -0.51
BRCC3-206ENST00000399042 BLMP54132 1417 aaPredicted RBP11.87□□□□□ -0.51
BRCC3-206ENST00000399042 ANKRD26Q9UPS8 1709 aa11.87□□□□□ -0.51
BRCC3-206ENST00000399042 A0A0G2JS52 829 aa11.87□□□□□ -0.51
BRCC3-206ENST00000399042 MYT1Q01538 1121 aa11.87□□□□□ -0.51
BRCC3-206ENST00000399042 UNC5CLQ8IV45 518 aa11.87□□□□□ -0.51
BRCC3-206ENST00000399042 PNNQ9H307 717 aaKnown RBP11.87□□□□□ -0.51
BRCC3-206ENST00000399042 COL22A1Q8NFW1 1626 aaPredicted RBP11.86□□□□□ -0.51
BRCC3-206ENST00000399042 HMOX1P09601 288 aa11.86□□□□□ -0.51
BRCC3-206ENST00000399042 IL13P35225 146 aa11.86□□□□□ -0.51
BRCC3-206ENST00000399042 CCDC184Q52MB2 194 aa11.86□□□□□ -0.51
BRCC3-206ENST00000399042 SULT6B1Q6IMI4 303 aa11.86□□□□□ -0.51
BRCC3-206ENST00000399042 LARP1Q6PKG0 1096 aaKnown RBP11.86□□□□□ -0.51
BRCC3-206ENST00000399042 USHBP1Q8N6Y0 703 aa11.86□□□□□ -0.51
BRCC3-206ENST00000399042 CDK12Q9NYV4 1490 aaPredicted RBP11.86□□□□□ -0.51
BRCC3-206ENST00000399042 PHRF1Q9P1Y6 1649 aaKnown RBP11.86□□□□□ -0.51
BRCC3-206ENST00000399042 ERBB3P21860 1342 aa11.86□□□□□ -0.51
BRCC3-206ENST00000399042 ZNF772Q68DY9 489 aaPredicted RBP11.85□□□□□ -0.51
BRCC3-206ENST00000399042 RAPGEF4Q8WZA2 1011 aa11.85□□□□□ -0.51
BRCC3-206ENST00000399042 WDR17Q8IZU2 1322 aa11.85□□□□□ -0.51
BRCC3-206ENST00000399042 NBPF6Q5VWK0 638 aa11.84□□□□□ -0.51
BRCC3-206ENST00000399042 FNBP4Q8N3X1 1017 aaPredicted RBP11.84□□□□□ -0.51
BRCC3-206ENST00000399042 NBPF4Q96M43 638 aa11.84□□□□□ -0.51
BRCC3-206ENST00000399042 EYA1Q99502 592 aa11.84□□□□□ -0.51
BRCC3-206ENST00000399042 QTRT2Q9H974 415 aaKnown RBP11.84□□□□□ -0.51
BRCC3-206ENST00000399042 LRP6O75581 1613 aa11.84□□□□□ -0.51
BRCC3-206ENST00000399042 USP54Q70EL1 1684 aa11.84□□□□□ -0.51
BRCC3-206ENST00000399042 MAPK8IP3Q9UPT6 1336 aa11.84□□□□□ -0.51
BRCC3-206ENST00000399042 CARD10Q9BWT7 1032 aa11.83□□□□□ -0.52
BRCC3-206ENST00000399042 TRPC5Q9UL62 973 aaPredicted RBP11.83□□□□□ -0.52
BRCC3-206ENST00000399042 ADAMTS8Q9UP79 889 aa11.83□□□□□ -0.52
BRCC3-206ENST00000399042 MAP2P11137 1827 aaKnown RBP11.82□□□□□ -0.52
BRCC3-206ENST00000399042 TATP17735 454 aaPredicted RBP11.82□□□□□ -0.52
BRCC3-206ENST00000399042 CCDC146Q8IYE0 955 aa11.82□□□□□ -0.52
BRCC3-206ENST00000399042 TCP11L2Q8N4U5 519 aa11.82□□□□□ -0.52
BRCC3-206ENST00000399042 PNISRQ8TF01 805 aaKnown RBP11.82□□□□□ -0.52
BRCC3-206ENST00000399042 MARF1Q9Y4F3 1742 aaKnown RBP11.81□□□□□ -0.52
BRCC3-206ENST00000399042 FCHSD2O94868 740 aa11.81□□□□□ -0.52
BRCC3-206ENST00000399042 PRKAR2BP31323 418 aa11.81□□□□□ -0.52
BRCC3-206ENST00000399042 FKBP8Q14318 412 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms