RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 MRE11P49959 708 aa11.15□□□□□ -0.63
ATL3-201ENST00000398868 TRIM5Q9C035 493 aa11.15□□□□□ -0.63
ATL3-201ENST00000398868 SEPT11Q9NVA2 429 aaKnown RBP11.15□□□□□ -0.63
ATL3-201ENST00000398868 ZHX1Q9UKY1 873 aaPredicted RBP11.15□□□□□ -0.63
ATL3-201ENST00000398868 TNNT1P13805 278 aa11.14□□□□□ -0.63
ATL3-201ENST00000398868 PRKRIP1Q9H875 184 aaPredicted RBP11.14□□□□□ -0.63
ATL3-201ENST00000398868 IL1RAPL2Q9NP60 686 aa11.14□□□□□ -0.63
ATL3-201ENST00000398868 ZFP91Q96JP5 570 aaPredicted RBP11.14□□□□□ -0.63
ATL3-201ENST00000398868 ERC2O15083 957 aa11.14□□□□□ -0.63
ATL3-201ENST00000398868 GPTP24298 496 aa11.14□□□□□ -0.63
ATL3-201ENST00000398868 DHX8Q14562 1220 aaKnown RBP11.14□□□□□ -0.63
ATL3-201ENST00000398868 PRPF40AO75400 957 aaKnown RBP11.13□□□□□ -0.63
ATL3-201ENST00000398868 GNAI1P63096 354 aa11.13□□□□□ -0.63
ATL3-201ENST00000398868 CCDC30Q5VVM6 783 aa11.13□□□□□ -0.63
ATL3-201ENST00000398868 BRMS1Q9HCU9 246 aa11.13□□□□□ -0.63
ATL3-201ENST00000398868 FOXO3O43524 673 aa11.13□□□□□ -0.63
ATL3-201ENST00000398868 CCDC57Q2TAC2 916 aa11.13□□□□□ -0.63
ATL3-201ENST00000398868 ANKRD20A12PQ8NF67 263 aa11.13□□□□□ -0.63
ATL3-201ENST00000398868 IDH1O75874 414 aaKnown RBP11.13□□□□□ -0.63
ATL3-201ENST00000398868 REC8O95072 547 aa11.13□□□□□ -0.63
ATL3-201ENST00000398868 CCDC158Q5M9N0 1113 aa11.13□□□□□ -0.63
ATL3-201ENST00000398868 CNTROBQ8N137 903 aa11.13□□□□□ -0.63
ATL3-201ENST00000398868 LARP6Q9BRS8 491 aaKnown RBP11.13□□□□□ -0.63
ATL3-201ENST00000398868 C22orf23Q9BZE7 217 aa11.13□□□□□ -0.63
ATL3-201ENST00000398868 API5Q9BZZ5 524 aaKnown RBP11.13□□□□□ -0.63
ATL3-201ENST00000398868 GAPVD1Q14C86 1478 aa11.12□□□□□ -0.63
ATL3-201ENST00000398868 CCDC97Q96F63 343 aaPredicted RBP11.12□□□□□ -0.63
ATL3-201ENST00000398868 SDF4Q9BRK5 362 aa11.12□□□□□ -0.63
ATL3-201ENST00000398868 TANGO6Q9C0B7 1094 aa11.12□□□□□ -0.63
ATL3-201ENST00000398868 LRP2BPQ9P2M1 347 aa11.12□□□□□ -0.63
ATL3-201ENST00000398868 INTS3Q68E01 1043 aaKnown RBP11.12□□□□□ -0.63
ATL3-201ENST00000398868 MCM10Q7L590 875 aa11.12□□□□□ -0.63
ATL3-201ENST00000398868 ANKLE2Q86XL3 938 aa11.12□□□□□ -0.63
ATL3-201ENST00000398868 PSMD1Q99460 953 aa11.12□□□□□ -0.63
ATL3-201ENST00000398868 CT47B1P0C2W7 299 aaPredicted RBP11.11□□□□□ -0.63
ATL3-201ENST00000398868 TWISTNBQ3B726 338 aaPredicted RBP11.11□□□□□ -0.63
ATL3-201ENST00000398868 TICAM2Q86XR7 235 aa11.11□□□□□ -0.63
ATL3-201ENST00000398868 CLASRPQ8N2M8 674 aaKnown RBP11.11□□□□□ -0.63
ATL3-201ENST00000398868 TCP11L2Q8N4U5 519 aa11.11□□□□□ -0.63
ATL3-201ENST00000398868 SCAPERQ9BY12 1400 aa11.11□□□□□ -0.63
ATL3-201ENST00000398868 MINDY4BA8MYZ0 360 aa11.11□□□□□ -0.63
ATL3-201ENST00000398868 ZPR1O75312 459 aa11.11□□□□□ -0.63
ATL3-201ENST00000398868 ZNF622Q969S3 477 aaKnown RBP eCLIP11.11□□□□□ -0.634e-6■□□□□ 9.6
ATL3-201ENST00000398868 SCLT1Q96NL6 688 aa11.11□□□□□ -0.63
ATL3-201ENST00000398868 FBLN1P23142 703 aa11.11□□□□□ -0.63
ATL3-201ENST00000398868 SMG6Q86US8 1419 aaKnown RBP11.11□□□□□ -0.63
ATL3-201ENST00000398868 ZNF76P36508 570 aa11.11□□□□□ -0.63
ATL3-201ENST00000398868 TDO2P48775 406 aa11.11□□□□□ -0.63
ATL3-201ENST00000398868 CHRNA2Q15822 529 aa11.11□□□□□ -0.63
ATL3-201ENST00000398868 PDCL3Q9H2J4 239 aa11.11□□□□□ -0.63
ATL3-201ENST00000398868 ANKRD62A6NC57 917 aa11.1□□□□□ -0.63
ATL3-201ENST00000398868 PIP4K2AP48426 406 aaPredicted RBP11.1□□□□□ -0.63
ATL3-201ENST00000398868 IPO4Q8TEX9 1081 aaKnown RBP11.1□□□□□ -0.63
ATL3-201ENST00000398868 CDR1P51861 262 aa11.1□□□□□ -0.63
ATL3-201ENST00000398868 CWC27Q6UX04 472 aaKnown RBP11.1□□□□□ -0.63
ATL3-201ENST00000398868 MTERF4Q7Z6M4 381 aaKnown RBP11.1□□□□□ -0.63
ATL3-201ENST00000398868 NUTM1Q86Y26 1132 aa11.1□□□□□ -0.63
ATL3-201ENST00000398868 FIBPO43427 364 aa11.1□□□□□ -0.63
ATL3-201ENST00000398868 AACSQ86V21 672 aa11.1□□□□□ -0.63
ATL3-201ENST00000398868 NESP48681 1621 aa11.09□□□□□ -0.63
ATL3-201ENST00000398868 TSPY26PQ9H489 355 aa11.09□□□□□ -0.63
ATL3-201ENST00000398868 F8W031 263 aaPredicted RBP11.09□□□□□ -0.63
ATL3-201ENST00000398868 CCDC73Q6ZRK6 1079 aa11.09□□□□□ -0.63
ATL3-201ENST00000398868 THEMISQ8N1K5 641 aaPredicted RBP11.09□□□□□ -0.63
ATL3-201ENST00000398868 CCDC69A6NI79 296 aa11.09□□□□□ -0.63
ATL3-201ENST00000398868 NEFHP12036 1026 aa11.09□□□□□ -0.63
ATL3-201ENST00000398868 SART3Q15020 963 aaKnown RBP11.09□□□□□ -0.63
ATL3-201ENST00000398868 HOOK1Q9UJC3 728 aaKnown RBP11.09□□□□□ -0.63
ATL3-201ENST00000398868 FGD5Q6ZNL6 1462 aa11.09□□□□□ -0.63
ATL3-201ENST00000398868 NEK4P51957 841 aa11.09□□□□□ -0.63
ATL3-201ENST00000398868 KIAA0754O94854 1291 aa11.08□□□□□ -0.64
ATL3-201ENST00000398868 SSR1P43307 286 aaKnown RBP11.08□□□□□ -0.64
ATL3-201ENST00000398868 SKAP1Q86WV1 359 aa11.08□□□□□ -0.64
ATL3-201ENST00000398868 C8orf37Q96NL8 207 aa11.08□□□□□ -0.64
ATL3-201ENST00000398868 SPG7Q9UQ90 795 aa11.08□□□□□ -0.64
ATL3-201ENST00000398868 CLEC11AQ9Y240 323 aa11.08□□□□□ -0.64
ATL3-201ENST00000398868 SMARCA5O60264 1052 aaPredicted RBP11.08□□□□□ -0.64
ATL3-201ENST00000398868 OLFM4Q6UX06 510 aa11.08□□□□□ -0.64
ATL3-201ENST00000398868 SLC3A2P08195 630 aaKnown RBP11.08□□□□□ -0.64
ATL3-201ENST00000398868 XBP1P17861 261 aa11.08□□□□□ -0.64
ATL3-201ENST00000398868 CGNQ9P2M7 1197 aaKnown RBP11.08□□□□□ -0.64
ATL3-201ENST00000398868 GNL3LQ9NVN8 582 aaKnown RBP11.08□□□□□ -0.64
ATL3-201ENST00000398868 DDX11Q96FC9 970 aa11.08□□□□□ -0.64
ATL3-201ENST00000398868 TAX1BP1Q86VP1 789 aa11.07□□□□□ -0.64
ATL3-201ENST00000398868 RAB11FIP4Q86YS3 637 aa11.07□□□□□ -0.64
ATL3-201ENST00000398868 SRRTQ9BXP5 876 aaKnown RBP11.07□□□□□ -0.64
ATL3-201ENST00000398868 ENOX2Q16206 610 aaKnown RBP11.07□□□□□ -0.64
ATL3-201ENST00000398868 CCDC144CPQ8IYA2 1237 aa11.07□□□□□ -0.64
ATL3-201ENST00000398868 KIF7Q2M1P5 1343 aa11.07□□□□□ -0.64
ATL3-201ENST00000398868 RBM26Q5T8P6 1007 aaKnown RBP11.07□□□□□ -0.64
ATL3-201ENST00000398868 TAF3Q5VWG9 929 aa11.07□□□□□ -0.64
ATL3-201ENST00000398868 CRACR2BQ8N4Y2 399 aaPredicted RBP11.07□□□□□ -0.64
ATL3-201ENST00000398868 MIA2Q96PC5 1412 aa11.07□□□□□ -0.64
ATL3-201ENST00000398868 NUCB2P80303 420 aa11.06□□□□□ -0.64
ATL3-201ENST00000398868 SYCP1Q15431 976 aa11.06□□□□□ -0.64
ATL3-201ENST00000398868 DYDC1Q8WWB3 177 aa11.06□□□□□ -0.64
ATL3-201ENST00000398868 MYD88Q99836 296 aa11.06□□□□□ -0.64
ATL3-201ENST00000398868 CCDC173Q0VFZ6 552 aa11.06□□□□□ -0.64
ATL3-201ENST00000398868 GAS2L2Q8NHY3 880 aa11.06□□□□□ -0.64
ATL3-201ENST00000398868 PRG4Q92954 1404 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms