RNA–Protein interactions for RNA: ENST00000398676.3

CCAR1-202, Transcript of cell division cycle and apoptosis regulator 1, humanhuman

TSL 3

Gene CCAR1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAR1-202ENST00000398676 SLC6A16Q9GZN6 736 aa14.01□□□□□ -0.17
CCAR1-202ENST00000398676 ESF1Q9H501 851 aaKnown RBP14.01□□□□□ -0.17
CCAR1-202ENST00000398676 RNF17Q9BXT8 1623 aaKnown RBP14.01□□□□□ -0.17
CCAR1-202ENST00000398676 FAM117AQ9C073 453 aa14□□□□□ -0.17
CCAR1-202ENST00000398676 AGLP35573 1532 aa14□□□□□ -0.17
CCAR1-202ENST00000398676 S1PR4O95977 384 aa13.99□□□□□ -0.17
CCAR1-202ENST00000398676 BRPF1P55201 1214 aaPredicted RBP13.99□□□□□ -0.17
CCAR1-202ENST00000398676 RSPH6AQ9H0K4 717 aa13.99□□□□□ -0.17
CCAR1-202ENST00000398676 REREQ9P2R6 1566 aa13.98□□□□□ -0.17
CCAR1-202ENST00000398676 GJA5P36382 358 aa13.97□□□□□ -0.17
CCAR1-202ENST00000398676 RSBN1LQ6PCB5 846 aaPredicted RBP13.97□□□□□ -0.17
CCAR1-202ENST00000398676 RIC3Q7Z5B4 369 aa13.97□□□□□ -0.17
CCAR1-202ENST00000398676 USB1Q9BQ65 265 aaKnown RBP13.97□□□□□ -0.17
CCAR1-202ENST00000398676 PCDHGC3Q9UN70 934 aa13.97□□□□□ -0.17
CCAR1-202ENST00000398676 MYO3AQ8NEV4 1616 aa13.97□□□□□ -0.17
CCAR1-202ENST00000398676 CEP170BQ9Y4F5 1589 aaPredicted RBP13.96□□□□□ -0.17
CCAR1-202ENST00000398676 LRRC7Q96NW7 1537 aa13.96□□□□□ -0.17
CCAR1-202ENST00000398676 C6orf229H3BNL8 230 aa13.96□□□□□ -0.17
CCAR1-202ENST00000398676 MYSM1Q5VVJ2 828 aa13.96□□□□□ -0.17
CCAR1-202ENST00000398676 SPTLC1O15269 473 aa13.95□□□□□ -0.18
CCAR1-202ENST00000398676 MSS51Q4VC12 460 aa13.95□□□□□ -0.18
CCAR1-202ENST00000398676 FAM160A2Q8N612 972 aaPredicted RBP13.95□□□□□ -0.18
CCAR1-202ENST00000398676 MROH2AA6NES4 1674 aa13.95□□□□□ -0.18
CCAR1-202ENST00000398676 ARID3CA6NKF2 412 aa13.94□□□□□ -0.18
CCAR1-202ENST00000398676 RGS20O76081 388 aa13.94□□□□□ -0.18
CCAR1-202ENST00000398676 VWDEQ8N2E2 1590 aa13.94□□□□□ -0.18
CCAR1-202ENST00000398676 SYMPKQ92797 1274 aaKnown RBP13.94□□□□□ -0.18
CCAR1-202ENST00000398676 POLR1AO95602 1720 aaPredicted RBP13.93□□□□□ -0.18
CCAR1-202ENST00000398676 SCAPERQ9BY12 1400 aa13.93□□□□□ -0.18
CCAR1-202ENST00000398676 RNF223E7ERA6 249 aa13.93□□□□□ -0.18
CCAR1-202ENST00000398676 RETREG3Q86VR2 466 aa13.92□□□□□ -0.18
CCAR1-202ENST00000398676 TRIM52Q96A61 297 aa13.92□□□□□ -0.18
CCAR1-202ENST00000398676 CDK12Q9NYV4 1490 aaPredicted RBP13.92□□□□□ -0.18
CCAR1-202ENST00000398676 SETBP1Q9Y6X0 1596 aa13.92□□□□□ -0.18
CCAR1-202ENST00000398676 FAM9AQ8IZU1 332 aaPredicted RBP13.91□□□□□ -0.18
CCAR1-202ENST00000398676 PLEKHG3A1L390 1219 aa13.9□□□□□ -0.18
CCAR1-202ENST00000398676 PPEF1O14829 653 aaPredicted RBP13.9□□□□□ -0.18
CCAR1-202ENST00000398676 MTMR2Q13614 643 aa13.9□□□□□ -0.18
CCAR1-202ENST00000398676 CSPP1Q1MSJ5 1256 aa13.9□□□□□ -0.18
CCAR1-202ENST00000398676 ANKLE1Q8NAG6 615 aa13.9□□□□□ -0.18
CCAR1-202ENST00000398676 PRDM9Q9NQV7 894 aa13.9□□□□□ -0.18
CCAR1-202ENST00000398676 POLR3EQ9NVU0 708 aa13.9□□□□□ -0.18
CCAR1-202ENST00000398676 PCDHB15Q9Y5E8 787 aa13.9□□□□□ -0.18
CCAR1-202ENST00000398676 SYNMO15061 1565 aa13.9□□□□□ -0.18
CCAR1-202ENST00000398676 NEURL4Q96JN8 1562 aa13.9□□□□□ -0.18
CCAR1-202ENST00000398676 SPDYE5A6NIY4 337 aa13.89□□□□□ -0.19
CCAR1-202ENST00000398676 CLK2P49760 499 aaKnown RBP13.89□□□□□ -0.19
CCAR1-202ENST00000398676 IL27Q8NEV9 243 aa13.89□□□□□ -0.19
CCAR1-202ENST00000398676 SH3D19Q5HYK7 790 aa13.88□□□□□ -0.19
CCAR1-202ENST00000398676 LIMD1Q9UGP4 676 aa13.88□□□□□ -0.19
CCAR1-202ENST00000398676 DIP2CQ9Y2E4 1556 aa13.88□□□□□ -0.19
CCAR1-202ENST00000398676 ZNF772Q68DY9 489 aaPredicted RBP13.87□□□□□ -0.19
CCAR1-202ENST00000398676 ZBTB3Q9H5J0 574 aa13.87□□□□□ -0.19
CCAR1-202ENST00000398676 ATP1B4Q9UN42 357 aaPredicted RBP13.87□□□□□ -0.19
CCAR1-202ENST00000398676 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.86□□□□□ -0.19
CCAR1-202ENST00000398676 SKIV2LQ15477 1246 aaKnown RBP13.86□□□□□ -0.19
CCAR1-202ENST00000398676 TUSC1Q2TAM9 212 aa13.86□□□□□ -0.19
CCAR1-202ENST00000398676 PRPF38BQ5VTL8 546 aaKnown RBP13.86□□□□□ -0.19
CCAR1-202ENST00000398676 FAM135BQ49AJ0 1406 aa13.86□□□□□ -0.19
CCAR1-202ENST00000398676 MMP16P51512 607 aa13.85□□□□□ -0.19
CCAR1-202ENST00000398676 ZNF518AQ6AHZ1 1483 aa13.85□□□□□ -0.19
CCAR1-202ENST00000398676 HRCP23327 699 aa13.84□□□□□ -0.19
CCAR1-202ENST00000398676 PRKD2Q9BZL6 878 aa13.84□□□□□ -0.19
CCAR1-202ENST00000398676 FCF1Q9Y324 198 aaKnown RBP13.84□□□□□ -0.19
CCAR1-202ENST00000398676 ZMYM3Q14202 1370 aa13.83□□□□□ -0.19
CCAR1-202ENST00000398676 KDM5CP41229 1560 aa13.83□□□□□ -0.19
CCAR1-202ENST00000398676 CTTNBP2Q8WZ74 1663 aa13.83□□□□□ -0.2
CCAR1-202ENST00000398676 NUTM2BA6NNL0 878 aaPredicted RBP13.83□□□□□ -0.2
CCAR1-202ENST00000398676 NUTM2EB1AL46 878 aaPredicted RBP13.83□□□□□ -0.2
CCAR1-202ENST00000398676 DXOO77932 396 aaKnown RBP13.83□□□□□ -0.2
CCAR1-202ENST00000398676 JUNDP17535 347 aa13.83□□□□□ -0.2
CCAR1-202ENST00000398676 NUTM2DQ5VT03 806 aaPredicted RBP13.83□□□□□ -0.2
CCAR1-202ENST00000398676 NUTM2AQ8IVF1 878 aaPredicted RBP13.83□□□□□ -0.2
CCAR1-202ENST00000398676 PRR7Q8TB68 274 aa13.83□□□□□ -0.2
CCAR1-202ENST00000398676 CABLES1Q8TDN4 633 aa13.83□□□□□ -0.2
CCAR1-202ENST00000398676 LRP5O75197 1615 aa13.82□□□□□ -0.2
CCAR1-202ENST00000398676 DNMT1P26358 1616 aaKnown RBP13.82□□□□□ -0.2
CCAR1-202ENST00000398676 RXRBP28702 533 aa13.82□□□□□ -0.2
CCAR1-202ENST00000398676 A2ML1A8K2U0 1454 aa13.81□□□□□ -0.2
CCAR1-202ENST00000398676 CDK13Q14004 1512 aaKnown RBP13.8□□□□□ -0.2
CCAR1-202ENST00000398676 QPCTQ16769 361 aa13.8□□□□□ -0.2
CCAR1-202ENST00000398676 V9GY48 417 aaPredicted RBP13.8□□□□□ -0.2
CCAR1-202ENST00000398676 ABCA6Q8N139 1617 aa13.79□□□□□ -0.2
CCAR1-202ENST00000398676 STRCP1A6NGW2 1772 aa13.79□□□□□ -0.2
CCAR1-202ENST00000398676 LILRB3O75022 631 aa13.79□□□□□ -0.2
CCAR1-202ENST00000398676 SLC19A1P41440 591 aa13.79□□□□□ -0.2
CCAR1-202ENST00000398676 RAPGEF6Q8TEU7 1601 aa13.79□□□□□ -0.2
CCAR1-202ENST00000398676 GOPCQ9HD26 462 aa13.78□□□□□ -0.2
CCAR1-202ENST00000398676 PLCH2O75038 1416 aa13.77□□□□□ -0.21
CCAR1-202ENST00000398676 CCDC24Q8N4L8 307 aa13.77□□□□□ -0.21
CCAR1-202ENST00000398676 PROCA1Q8NCQ7 364 aaPredicted RBP13.77□□□□□ -0.21
CCAR1-202ENST00000398676 MED14O60244 1454 aa13.76□□□□□ -0.21
CCAR1-202ENST00000398676 JCADQ9P266 1359 aa13.76□□□□□ -0.21
CCAR1-202ENST00000398676 PLEKHD1A6NEE1 506 aa13.76□□□□□ -0.21
CCAR1-202ENST00000398676 CFAP99D6REC4 459 aa13.76□□□□□ -0.21
CCAR1-202ENST00000398676 PLA2G2CQ5R387 149 aa13.76□□□□□ -0.21
CCAR1-202ENST00000398676 DESI1Q6ICB0 168 aa13.76□□□□□ -0.21
CCAR1-202ENST00000398676 PCMTD1Q96MG8 357 aaPredicted RBP13.76□□□□□ -0.21
CCAR1-202ENST00000398676 DEPDC5O75140 1603 aa13.75□□□□□ -0.21
CCAR1-202ENST00000398676 MLH3Q9UHC1 1453 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms