RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 NALCNQ8IZF0 1738 aa12.81□□□□□ -0.36
HMGCLL1-205ENST00000398661 TTC21BQ7Z4L5 1316 aa12.8□□□□□ -0.36
HMGCLL1-205ENST00000398661 KNDC1Q76NI1 1749 aa12.8□□□□□ -0.36
HMGCLL1-205ENST00000398661 USP32Q8NFA0 1604 aa12.8□□□□□ -0.36
HMGCLL1-205ENST00000398661 PSME1Q06323 249 aa12.8□□□□□ -0.36
HMGCLL1-205ENST00000398661 CPSF1Q10570 1443 aaKnown RBP12.8□□□□□ -0.36
HMGCLL1-205ENST00000398661 TRAK2O60296 914 aa12.8□□□□□ -0.36
HMGCLL1-205ENST00000398661 NLRP6P59044 892 aa12.8□□□□□ -0.36
HMGCLL1-205ENST00000398661 ABTB2Q8N961 1025 aa12.8□□□□□ -0.36
HMGCLL1-205ENST00000398661 GRPEL1Q9HAV7 217 aa12.8□□□□□ -0.36
HMGCLL1-205ENST00000398661 PIK3R4Q99570 1358 aa12.79□□□□□ -0.36
HMGCLL1-205ENST00000398661 ATF3P18847 181 aa12.79□□□□□ -0.36
HMGCLL1-205ENST00000398661 WDR43Q15061 677 aaKnown RBP eCLIP12.79□□□□□ -0.36
HMGCLL1-205ENST00000398661 PUS7Q96PZ0 661 aaKnown RBP12.79□□□□□ -0.36
HMGCLL1-205ENST00000398661 TBC1D2Q9BYX2 928 aa12.79□□□□□ -0.36
HMGCLL1-205ENST00000398661 C19orf44Q9H6X5 657 aa12.79□□□□□ -0.36
HMGCLL1-205ENST00000398661 MAPK8IP3Q9UPT6 1336 aa12.79□□□□□ -0.36
HMGCLL1-205ENST00000398661 PLEKHG3A1L390 1219 aa12.79□□□□□ -0.36
HMGCLL1-205ENST00000398661 CABLES1Q8TDN4 633 aa12.79□□□□□ -0.36
HMGCLL1-205ENST00000398661 POLKQ9UBT6 870 aa12.79□□□□□ -0.36
HMGCLL1-205ENST00000398661 IGHDP01880 384 aa12.78□□□□□ -0.36
HMGCLL1-205ENST00000398661 COG3Q96JB2 828 aa12.78□□□□□ -0.36
HMGCLL1-205ENST00000398661 PRDM4Q9UKN5 801 aa12.78□□□□□ -0.36
HMGCLL1-205ENST00000398661 HMOX1P09601 288 aa12.77□□□□□ -0.37
HMGCLL1-205ENST00000398661 TRIM44Q96DX7 344 aaPredicted RBP12.77□□□□□ -0.37
HMGCLL1-205ENST00000398661 ADGRL3Q9HAR2 1447 aa12.77□□□□□ -0.37
HMGCLL1-205ENST00000398661 U2AF1L5P0DN76 240 aaPredicted RBP12.77□□□□□ -0.37
HMGCLL1-205ENST00000398661 U2AF1Q01081 240 aaKnown RBP eCLIP12.77□□□□□ -0.37
HMGCLL1-205ENST00000398661 ISY1Q9ULR0 285 aaKnown RBP12.77□□□□□ -0.37
HMGCLL1-205ENST00000398661 APAF1O14727 1248 aa12.76□□□□□ -0.37
HMGCLL1-205ENST00000398661 LTV1Q96GA3 475 aaPredicted RBP12.76□□□□□ -0.37
HMGCLL1-205ENST00000398661 TBC1D32Q96NH3 1257 aa12.76□□□□□ -0.37
HMGCLL1-205ENST00000398661 UPF2Q9HAU5 1272 aaKnown RBP12.76□□□□□ -0.37
HMGCLL1-205ENST00000398661 USP6P35125 1406 aa12.76□□□□□ -0.37
HMGCLL1-205ENST00000398661 GOLGA2Q08379 1002 aa12.76□□□□□ -0.37
HMGCLL1-205ENST00000398661 HSP90AB2PQ58FF8 381 aa12.76□□□□□ -0.37
HMGCLL1-205ENST00000398661 RBM10P98175 930 aaKnown RBP12.75□□□□□ -0.37
HMGCLL1-205ENST00000398661 ZNF521Q96K83 1311 aa12.75□□□□□ -0.37
HMGCLL1-205ENST00000398661 ZNF692Q9BU19 519 aaPredicted RBP12.75□□□□□ -0.37
HMGCLL1-205ENST00000398661 CHMP5Q9NZZ3 219 aa12.75□□□□□ -0.37
HMGCLL1-205ENST00000398661 DMRT2Q9Y5R5 561 aa12.75□□□□□ -0.37
HMGCLL1-205ENST00000398661 EDC4Q6P2E9 1401 aaKnown RBP12.74□□□□□ -0.37
HMGCLL1-205ENST00000398661 NINLQ9Y2I6 1382 aa12.74□□□□□ -0.37
HMGCLL1-205ENST00000398661 KIAA1211Q6ZU35 1233 aa12.74□□□□□ -0.37
HMGCLL1-205ENST00000398661 SPRYD3Q8NCJ5 442 aa12.74□□□□□ -0.37
HMGCLL1-205ENST00000398661 CDC42BPGQ6DT37 1551 aa12.74□□□□□ -0.37
HMGCLL1-205ENST00000398661 NPC1L1Q9UHC9 1359 aa12.73□□□□□ -0.37
HMGCLL1-205ENST00000398661 SLFN5Q08AF3 891 aa12.72□□□□□ -0.37
HMGCLL1-205ENST00000398661 AEBP2Q6ZN18 517 aaPredicted RBP12.72□□□□□ -0.37
HMGCLL1-205ENST00000398661 KRT28Q7Z3Y7 464 aa12.72□□□□□ -0.37
HMGCLL1-205ENST00000398661 ADGRB2O60241 1585 aa12.72□□□□□ -0.37
HMGCLL1-205ENST00000398661 ZC3H6P61129 1189 aaKnown RBP12.71□□□□□ -0.37
HMGCLL1-205ENST00000398661 AEBP1Q8IUX7 1158 aa12.71□□□□□ -0.37
HMGCLL1-205ENST00000398661 DDX11L8A8MPP1 907 aa12.71□□□□□ -0.37
HMGCLL1-205ENST00000398661 SLAIN2Q9P270 581 aa12.71□□□□□ -0.37
HMGCLL1-205ENST00000398661 MAP3K19Q56UN5 1328 aa12.71□□□□□ -0.38
HMGCLL1-205ENST00000398661 C1orf167Q5SNV9 1468 aa12.71□□□□□ -0.38
HMGCLL1-205ENST00000398661 PIP4K2BP78356 416 aa12.7□□□□□ -0.38
HMGCLL1-205ENST00000398661 BRINP3Q76B58 766 aa12.7□□□□□ -0.38
HMGCLL1-205ENST00000398661 SPINK5Q9NQ38 1064 aaPredicted RBP12.7□□□□□ -0.38
HMGCLL1-205ENST00000398661 A0A0U1RQG5 324 aaPredicted RBP12.7□□□□□ -0.38
HMGCLL1-205ENST00000398661 BCAR3O75815 825 aa12.7□□□□□ -0.38
HMGCLL1-205ENST00000398661 USHBP1Q8N6Y0 703 aa12.7□□□□□ -0.38
HMGCLL1-205ENST00000398661 LRRC7Q96NW7 1537 aa12.7□□□□□ -0.38
HMGCLL1-205ENST00000398661 POLR3AO14802 1390 aaPredicted RBP12.7□□□□□ -0.38
HMGCLL1-205ENST00000398661 MSH6P52701 1360 aa12.7□□□□□ -0.38
HMGCLL1-205ENST00000398661 TRMT2AQ8IZ69 625 aaKnown RBP12.69□□□□□ -0.38
HMGCLL1-205ENST00000398661 AAMPQ13685 434 aa12.69□□□□□ -0.38
HMGCLL1-205ENST00000398661 CADPS2Q86UW7 1296 aa12.69□□□□□ -0.38
HMGCLL1-205ENST00000398661 FMN2Q9NZ56 1722 aa12.69□□□□□ -0.38
HMGCLL1-205ENST00000398661 MAP2P11137 1827 aaKnown RBP12.69□□□□□ -0.38
HMGCLL1-205ENST00000398661 CLUAP1Q96AJ1 413 aa12.68□□□□□ -0.38
HMGCLL1-205ENST00000398661 PHACTR3Q96KR7 559 aa12.68□□□□□ -0.38
HMGCLL1-205ENST00000398661 SSH2Q76I76 1423 aa12.68□□□□□ -0.38
HMGCLL1-205ENST00000398661 DIAPH1O60610 1272 aaKnown RBP12.68□□□□□ -0.38
HMGCLL1-205ENST00000398661 OFD1O75665 1012 aa12.68□□□□□ -0.38
HMGCLL1-205ENST00000398661 CFAP53Q96M91 514 aa12.68□□□□□ -0.38
HMGCLL1-205ENST00000398661 MAP7D2Q96T17 732 aa12.68□□□□□ -0.38
HMGCLL1-205ENST00000398661 MST1RQ04912 1400 aa12.68□□□□□ -0.38
HMGCLL1-205ENST00000398661 EP400Q96L91 3159 aa12.68□□□□□ -0.38
HMGCLL1-205ENST00000398661 ITSN1Q15811 1721 aa12.67□□□□□ -0.38
HMGCLL1-205ENST00000398661 AMPHP49418 695 aa12.67□□□□□ -0.38
HMGCLL1-205ENST00000398661 RIPK4P57078 832 aa12.67□□□□□ -0.38
HMGCLL1-205ENST00000398661 CHRNA2Q15822 529 aa12.67□□□□□ -0.38
HMGCLL1-205ENST00000398661 GAS2L3Q86XJ1 694 aa12.67□□□□□ -0.38
HMGCLL1-205ENST00000398661 TOPAZ1Q8N9V7 1692 aa12.67□□□□□ -0.38
HMGCLL1-205ENST00000398661 TERF1P54274 439 aa12.67□□□□□ -0.38
HMGCLL1-205ENST00000398661 TCP11L2Q8N4U5 519 aa12.67□□□□□ -0.38
HMGCLL1-205ENST00000398661 THUMPD2Q9BTF0 503 aaKnown RBP12.67□□□□□ -0.38
HMGCLL1-205ENST00000398661 PDE3AQ14432 1141 aa12.66□□□□□ -0.38
HMGCLL1-205ENST00000398661 NWD1Q149M9 1564 aa12.66□□□□□ -0.38
HMGCLL1-205ENST00000398661 NSD2O96028 1365 aa12.66□□□□□ -0.38
HMGCLL1-205ENST00000398661 EIF4A2Q14240 407 aaKnown RBP12.66□□□□□ -0.38
HMGCLL1-205ENST00000398661 GOLGB1Q14789 3259 aaKnown RBP12.66□□□□□ -0.38
HMGCLL1-205ENST00000398661 MON2Q7Z3U7 1717 aa12.66□□□□□ -0.38
HMGCLL1-205ENST00000398661 SRCAPQ6ZRS2 3230 aa12.65□□□□□ -0.38
HMGCLL1-205ENST00000398661 PRKAR2BP31323 418 aa12.65□□□□□ -0.38
HMGCLL1-205ENST00000398661 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.65□□□□□ -0.38
HMGCLL1-205ENST00000398661 LRRC59Q96AG4 307 aaKnown RBP12.65□□□□□ -0.38
HMGCLL1-205ENST00000398661 AXIN2Q9Y2T1 843 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms