RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 FERP16591 822 aa15.1■□□□□ 0.01
CCBE1-201ENST00000398179 ATP6V1E1P36543 226 aa15.1■□□□□ 0.01
CCBE1-201ENST00000398179 EXOC1Q9NV70 894 aa15.1■□□□□ 0.01
CCBE1-201ENST00000398179 PDCD2Q16342 344 aaPredicted RBP15.09■□□□□ 0.01
CCBE1-201ENST00000398179 PPM1EQ8WY54 764 aa15.09■□□□□ 0.01
CCBE1-201ENST00000398179 MACROD2A1Z1Q3 448 aa15.09■□□□□ 0.01
CCBE1-201ENST00000398179 CALR3Q96L12 384 aaKnown RBP15.09■□□□□ 0.01
CCBE1-201ENST00000398179 RLBP1P12271 317 aa15.09■□□□□ 0.01
CCBE1-201ENST00000398179 ANKRD24Q8TF21 1146 aa15.09■□□□□ 0.01
CCBE1-201ENST00000398179 SH3GL3Q99963 347 aa15.09■□□□□ 0.01
CCBE1-201ENST00000398179 GEMIN8Q9NWZ8 242 aaKnown RBP15.09■□□□□ 0.01
CCBE1-201ENST00000398179 KIF5BP33176 963 aa15.09■□□□□ 0.01
CCBE1-201ENST00000398179 TAOK3Q9H2K8 898 aa15.09■□□□□ 0.01
CCBE1-201ENST00000398179 ZC4H2Q9NQZ6 224 aa15.09■□□□□ 0.01
CCBE1-201ENST00000398179 CA8P35219 290 aa15.08■□□□□ 0
CCBE1-201ENST00000398179 IRX1P78414 480 aaPredicted RBP15.08■□□□□ 0
CCBE1-201ENST00000398179 CCDC50Q8IVM0 306 aa15.08■□□□□ 0
CCBE1-201ENST00000398179 DDX27Q96GQ7 796 aaKnown RBP15.08■□□□□ 0
CCBE1-201ENST00000398179 CRACR2AQ9BSW2 395 aa15.08■□□□□ 0
CCBE1-201ENST00000398179 RCAN3Q9UKA8 241 aa15.08■□□□□ 0
CCBE1-201ENST00000398179 ERLIN2O94905 339 aa15.08■□□□□ 0
CCBE1-201ENST00000398179 NMIQ13287 307 aaPredicted RBP15.08■□□□□ 0
CCBE1-201ENST00000398179 DHX8Q14562 1220 aaKnown RBP15.08■□□□□ 0
CCBE1-201ENST00000398179 ZNF280DQ6N043 979 aa15.08■□□□□ 0
CCBE1-201ENST00000398179 UBE2Q1Q7Z7E8 422 aa15.08■□□□□ 0
CCBE1-201ENST00000398179 ERC1Q8IUD2 1116 aa15.08■□□□□ 0
CCBE1-201ENST00000398179 PRIMPOLQ96LW4 560 aa15.07■□□□□ 0
CCBE1-201ENST00000398179 CTAGE5O15320 804 aa15.07■□□□□ 0
CCBE1-201ENST00000398179 MAP9Q49MG5 647 aa15.07■□□□□ 0
CCBE1-201ENST00000398179 HDGFL1Q5TGJ6 251 aa15.07■□□□□ 0
CCBE1-201ENST00000398179 CDCA8Q53HL2 280 aa15.07■□□□□ 0
CCBE1-201ENST00000398179 USP25Q9UHP3 1055 aa15.07■□□□□ 0
CCBE1-201ENST00000398179 MFSD4BQ5TF39 518 aa15.07■□□□□ 0
CCBE1-201ENST00000398179 FAM184AQ8NB25 1140 aa15.07■□□□□ 0
CCBE1-201ENST00000398179 TPX2Q9ULW0 747 aaKnown RBP15.07■□□□□ 0
CCBE1-201ENST00000398179 CCDC73Q6ZRK6 1079 aa15.06■□□□□ 0
CCBE1-201ENST00000398179 ANKRD18BA2A2Z9 1011 aa15.06■□□□□ 0
CCBE1-201ENST00000398179 ZFXP17010 805 aaPredicted RBP15.06■□□□□ 0
CCBE1-201ENST00000398179 HOMER1Q86YM7 354 aa15.06■□□□□ 0
CCBE1-201ENST00000398179 NUDCQ9Y266 331 aa15.06■□□□□ 0
CCBE1-201ENST00000398179 ERC2O15083 957 aa15.06■□□□□ 0
CCBE1-201ENST00000398179 PLIN1O60240 522 aa15.06■□□□□ 0
CCBE1-201ENST00000398179 TRIML1Q8N9V2 468 aa15.06■□□□□ 0
CCBE1-201ENST00000398179 WHAMMP3Q1A5X7 153 aa15.05■□□□□ 0
CCBE1-201ENST00000398179 UTP6Q9NYH9 597 aaKnown RBP15.05■□□□□ 0
CCBE1-201ENST00000398179 H0YC42 278 aa15.05■□□□□ 0
CCBE1-201ENST00000398179 MCM5P33992 734 aa15.05■□□□□ 0
CCBE1-201ENST00000398179 TPD52P55327 224 aaPredicted RBP15.05■□□□□ 0
CCBE1-201ENST00000398179 TPD52L1Q16890 204 aaPredicted RBP15.05■□□□□ -0
CCBE1-201ENST00000398179 CCDC114Q96M63 670 aa15.05■□□□□ -0
CCBE1-201ENST00000398179 EEA1Q15075 1411 aa15.05■□□□□ -0
CCBE1-201ENST00000398179 DYTNA2CJ06 578 aa15.05■□□□□ -0
CCBE1-201ENST00000398179 AMOTQ4VCS5 1084 aa15.05■□□□□ -0
CCBE1-201ENST00000398179 RSPH14Q9UHP6 348 aa15.05■□□□□ -0
CCBE1-201ENST00000398179 ZNF365Q70YC5 407 aa15.04■□□□□ -0
CCBE1-201ENST00000398179 TMF1P82094 1093 aa15.04■□□□□ -0
CCBE1-201ENST00000398179 PRPF4BQ13523 1007 aaKnown RBP15.04■□□□□ -0
CCBE1-201ENST00000398179 OGFRQ9NZT2 677 aa15.04■□□□□ -0
CCBE1-201ENST00000398179 CEP162Q5TB80 1403 aa15.04■□□□□ -0
CCBE1-201ENST00000398179 PSMD6Q15008 389 aa15.04■□□□□ -0
CCBE1-201ENST00000398179 FMNL2Q96PY5 1086 aa15.04■□□□□ -0
CCBE1-201ENST00000398179 MPNDQ8N594 471 aa15.04■□□□□ -0
CCBE1-201ENST00000398179 USP33Q8TEY7 942 aa15.04■□□□□ -0
CCBE1-201ENST00000398179 TMCO3Q6UWJ1 677 aa15.03■□□□□ -0
CCBE1-201ENST00000398179 SETDB1Q15047 1291 aa15.03■□□□□ -0
CCBE1-201ENST00000398179 ATRIPQ8WXE1 791 aa15.03■□□□□ -0
CCBE1-201ENST00000398179 PPM1FP49593 454 aaPredicted RBP15.03■□□□□ -0
CCBE1-201ENST00000398179 BMS1Q14692 1282 aaKnown RBP15.03■□□□□ -0
CCBE1-201ENST00000398179 hCG_2014768A0A024R1R8 64 aa15.02■□□□□ -0
CCBE1-201ENST00000398179 IPO8O15397 1037 aaKnown RBP15.02■□□□□ -0
CCBE1-201ENST00000398179 SMC2O95347 1197 aa15.02■□□□□ -0
CCBE1-201ENST00000398179 ZFYVE27Q5T4F4 411 aa15.02□□□□□ -0.01
CCBE1-201ENST00000398179 TRIM17Q9Y577 477 aa15.02□□□□□ -0.01
CCBE1-201ENST00000398179 RUFY3Q7L099 469 aa15.01□□□□□ -0.01
CCBE1-201ENST00000398179 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.01□□□□□ -0.01
CCBE1-201ENST00000398179 MICALL1Q8N3F8 863 aa15.01□□□□□ -0.01
CCBE1-201ENST00000398179 MRFAP1Q9Y605 127 aa15.01□□□□□ -0.01
CCBE1-201ENST00000398179 LRRC43Q8N309 656 aa15.01□□□□□ -0.01
CCBE1-201ENST00000398179 TERF1P54274 439 aa15.01□□□□□ -0.01
CCBE1-201ENST00000398179 NINLQ9Y2I6 1382 aa15.01□□□□□ -0.01
CCBE1-201ENST00000398179 RWDD1Q9H446 243 aaPredicted RBP15.01□□□□□ -0.01
CCBE1-201ENST00000398179 CCDC47Q96A33 483 aaKnown RBP15.01□□□□□ -0.01
CCBE1-201ENST00000398179 STK3Q13188 491 aa15□□□□□ -0.01
CCBE1-201ENST00000398179 BAG4O95429 457 aaKnown RBP15□□□□□ -0.01
CCBE1-201ENST00000398179 TTC19Q6DKK2 380 aaPredicted RBP15□□□□□ -0.01
CCBE1-201ENST00000398179 EPSTI1Q96J88 318 aa15□□□□□ -0.01
CCBE1-201ENST00000398179 GBP3Q9H0R5 595 aa15□□□□□ -0.01
CCBE1-201ENST00000398179 TRIM6Q9C030 488 aaPredicted RBP15□□□□□ -0.01
CCBE1-201ENST00000398179 GRPEL1Q9HAV7 217 aa15□□□□□ -0.01
CCBE1-201ENST00000398179 ZNF131P52739 623 aa14.99□□□□□ -0.01
CCBE1-201ENST00000398179 CCDC110Q8TBZ0 833 aa14.99□□□□□ -0.01
CCBE1-201ENST00000398179 PFDN1O60925 122 aa14.99□□□□□ -0.01
CCBE1-201ENST00000398179 SPAG9O60271 1321 aaKnown RBP14.99□□□□□ -0.01
CCBE1-201ENST00000398179 UBE4AQ14139 1066 aa14.99□□□□□ -0.01
CCBE1-201ENST00000398179 PRM3Q9NNZ6 103 aa14.99□□□□□ -0.01
CCBE1-201ENST00000398179 CHMP5Q9NZZ3 219 aa14.98□□□□□ -0.01
CCBE1-201ENST00000398179 TRIM35Q9UPQ4 493 aa14.98□□□□□ -0.01
CCBE1-201ENST00000398179 PEX19P40855 299 aa14.98□□□□□ -0.01
CCBE1-201ENST00000398179 SDCCAG8Q86SQ7 713 aaPredicted RBP14.98□□□□□ -0.01
CCBE1-201ENST00000398179 TSPY2A6NKD2 308 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms