RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 DPYSL4O14531 572 aa5.41□□□□□ -1.54
UBE3A-202ENST00000397954 FECHP22830 423 aa5.41□□□□□ -1.54
UBE3A-202ENST00000397954 PTPRUQ92729 1446 aa5.4□□□□□ -1.54
UBE3A-202ENST00000397954 USP32Q8NFA0 1604 aa5.4□□□□□ -1.54
UBE3A-202ENST00000397954 JCADQ9P266 1359 aa5.4□□□□□ -1.54
UBE3A-202ENST00000397954 HSPA2P54652 639 aa5.4□□□□□ -1.54
UBE3A-202ENST00000397954 COL14A1Q05707 1796 aaKnown RBP5.4□□□□□ -1.55
UBE3A-202ENST00000397954 TMEM94Q12767 1356 aa5.4□□□□□ -1.55
UBE3A-202ENST00000397954 PLCH1Q4KWH8 1693 aa5.4□□□□□ -1.55
UBE3A-202ENST00000397954 NLRP6P59044 892 aa5.4□□□□□ -1.55
UBE3A-202ENST00000397954 CCDC97Q96F63 343 aaPredicted RBP5.4□□□□□ -1.55
UBE3A-202ENST00000397954 MS4A4AQ96JQ5 239 aa5.4□□□□□ -1.55
UBE3A-202ENST00000397954 NRKQ7Z2Y5 1582 aa5.4□□□□□ -1.55
UBE3A-202ENST00000397954 RGPD3A6NKT7 1758 aaPredicted RBP5.39□□□□□ -1.55
UBE3A-202ENST00000397954 RGPD4Q7Z3J3 1758 aa5.39□□□□□ -1.55
UBE3A-202ENST00000397954 MS4A1P11836 297 aa5.39□□□□□ -1.55
UBE3A-202ENST00000397954 TTLL12Q14166 644 aaPredicted RBP5.39□□□□□ -1.55
UBE3A-202ENST00000397954 TRIM52Q96A61 297 aa5.39□□□□□ -1.55
UBE3A-202ENST00000397954 ZNF335Q9H4Z2 1342 aaPredicted RBP5.39□□□□□ -1.55
UBE3A-202ENST00000397954 AMHR2Q16671 573 aa5.39□□□□□ -1.55
UBE3A-202ENST00000397954 C1orf167Q5SNV9 1468 aa5.39□□□□□ -1.55
UBE3A-202ENST00000397954 WNK3Q9BYP7 1800 aa5.38□□□□□ -1.55
UBE3A-202ENST00000397954 IRF6O14896 467 aa5.38□□□□□ -1.55
UBE3A-202ENST00000397954 SPDYE1Q8NFV5 336 aaPredicted RBP5.38□□□□□ -1.55
UBE3A-202ENST00000397954 ANKRD26Q9UPS8 1709 aa5.38□□□□□ -1.55
UBE3A-202ENST00000397954 REPIN1Q9BWE0 567 aaKnown RBP5.38□□□□□ -1.55
UBE3A-202ENST00000397954 EMILIN3Q9NT22 766 aa5.38□□□□□ -1.55
UBE3A-202ENST00000397954 ARHGEF10O15013 1369 aa5.38□□□□□ -1.55
UBE3A-202ENST00000397954 PXDNQ92626 1479 aa5.38□□□□□ -1.55
UBE3A-202ENST00000397954 MAP2K5Q13163 448 aa5.37□□□□□ -1.55
UBE3A-202ENST00000397954 GOPCQ9HD26 462 aa5.37□□□□□ -1.55
UBE3A-202ENST00000397954 SERPINA10Q9UK55 444 aa5.37□□□□□ -1.55
UBE3A-202ENST00000397954 NRAPQ86VF7 1730 aa5.37□□□□□ -1.55
UBE3A-202ENST00000397954 MINK1Q8N4C8 1332 aaPredicted RBP5.37□□□□□ -1.55
UBE3A-202ENST00000397954 ATF3P18847 181 aa5.37□□□□□ -1.55
UBE3A-202ENST00000397954 ZNF326Q5BKZ1 582 aaKnown RBP5.37□□□□□ -1.55
UBE3A-202ENST00000397954 FBXW7Q969H0 707 aa5.37□□□□□ -1.55
UBE3A-202ENST00000397954 C11orf95C9JLR9 678 aaPredicted RBP5.36□□□□□ -1.55
UBE3A-202ENST00000397954 METP08581 1390 aa5.36□□□□□ -1.55
UBE3A-202ENST00000397954 GIGYF2Q6Y7W6 1299 aaKnown RBP5.36□□□□□ -1.55
UBE3A-202ENST00000397954 AMOTL2Q9Y2J4 779 aa5.36□□□□□ -1.55
UBE3A-202ENST00000397954 NPHP3Q7Z494 1330 aa5.36□□□□□ -1.55
UBE3A-202ENST00000397954 POLR3AO14802 1390 aaPredicted RBP5.35□□□□□ -1.55
UBE3A-202ENST00000397954 ATAD2Q6PL18 1390 aa5.35□□□□□ -1.55
UBE3A-202ENST00000397954 SLIT3O75094 1523 aa5.35□□□□□ -1.55
UBE3A-202ENST00000397954 NUTM2FA1L443 756 aa5.35□□□□□ -1.55
UBE3A-202ENST00000397954 IFNL1Q8IU54 200 aa5.35□□□□□ -1.55
UBE3A-202ENST00000397954 KIF20BQ96Q89 1820 aa5.35□□□□□ -1.55
UBE3A-202ENST00000397954 PCMTD1Q96MG8 357 aaPredicted RBP5.35□□□□□ -1.55
UBE3A-202ENST00000397954 SOS2Q07890 1332 aaPredicted RBP5.35□□□□□ -1.55
UBE3A-202ENST00000397954 TNS3Q68CZ2 1445 aa5.34□□□□□ -1.55
UBE3A-202ENST00000397954 UBAP1LF5GYI3 381 aa5.34□□□□□ -1.55
UBE3A-202ENST00000397954 PDIA6Q15084 440 aa5.34□□□□□ -1.55
UBE3A-202ENST00000397954 RGPD8O14715 1765 aaPredicted RBP5.34□□□□□ -1.55
UBE3A-202ENST00000397954 HMGB2P26583 209 aaKnown RBP5.34□□□□□ -1.55
UBE3A-202ENST00000397954 PSME1Q06323 249 aa5.34□□□□□ -1.55
UBE3A-202ENST00000397954 ROBO2Q9HCK4 1378 aa5.34□□□□□ -1.55
UBE3A-202ENST00000397954 CARNS1A5YM72 827 aa5.34□□□□□ -1.56
UBE3A-202ENST00000397954 GRXCR2A6NFK2 248 aa5.34□□□□□ -1.56
UBE3A-202ENST00000397954 SOX12O15370 315 aa5.34□□□□□ -1.56
UBE3A-202ENST00000397954 PPP1R15BQ5SWA1 713 aa5.34□□□□□ -1.56
UBE3A-202ENST00000397954 KIF24Q5T7B8 1368 aa5.33□□□□□ -1.56
UBE3A-202ENST00000397954 PROCA1Q8NCQ7 364 aaPredicted RBP5.33□□□□□ -1.56
UBE3A-202ENST00000397954 LRRC59Q96AG4 307 aaKnown RBP5.33□□□□□ -1.56
UBE3A-202ENST00000397954 SLAIN2Q9P270 581 aa5.33□□□□□ -1.56
UBE3A-202ENST00000397954 RGPD1P0DJD0 1748 aa5.33□□□□□ -1.56
UBE3A-202ENST00000397954 PARP4Q9UKK3 1724 aaKnown RBP5.33□□□□□ -1.56
UBE3A-202ENST00000397954 CDCA8Q53HL2 280 aa5.33□□□□□ -1.56
UBE3A-202ENST00000397954 ILDR1Q86SU0 546 aaPredicted RBP5.33□□□□□ -1.56
UBE3A-202ENST00000397954 OXER1Q8TDS5 423 aa5.33□□□□□ -1.56
UBE3A-202ENST00000397954 COG6Q9Y2V7 657 aa5.33□□□□□ -1.56
UBE3A-202ENST00000397954 CCDC61Q9Y6R9 512 aa5.33□□□□□ -1.56
UBE3A-202ENST00000397954 LMO7Q8WWI1 1683 aa5.32□□□□□ -1.56
UBE3A-202ENST00000397954 CAMTA1Q9Y6Y1 1673 aa5.32□□□□□ -1.56
UBE3A-202ENST00000397954 ZNF579Q8NAF0 562 aaKnown RBP5.32□□□□□ -1.56
UBE3A-202ENST00000397954 E9PSI1 815 aa5.32□□□□□ -1.56
UBE3A-202ENST00000397954 CHADLQ6NUI6 762 aa5.32□□□□□ -1.56
UBE3A-202ENST00000397954 PNPLA6Q8IY17 1366 aa5.32□□□□□ -1.56
UBE3A-202ENST00000397954 TONSLQ96HA7 1378 aa5.32□□□□□ -1.56
UBE3A-202ENST00000397954 TTC21AQ8NDW8 1320 aa5.31□□□□□ -1.56
UBE3A-202ENST00000397954 GNPATO15228 680 aa5.31□□□□□ -1.56
UBE3A-202ENST00000397954 ITGAEP38570 1179 aa5.31□□□□□ -1.56
UBE3A-202ENST00000397954 ZNF772Q68DY9 489 aaPredicted RBP5.31□□□□□ -1.56
UBE3A-202ENST00000397954 THSD7AQ9UPZ6 1657 aa5.31□□□□□ -1.56
UBE3A-202ENST00000397954 CPDO75976 1380 aa5.31□□□□□ -1.56
UBE3A-202ENST00000397954 ADGRF5Q8IZF2 1346 aa5.31□□□□□ -1.56
UBE3A-202ENST00000397954 PIK3C2AO00443 1686 aa5.31□□□□□ -1.56
UBE3A-202ENST00000397954 ZNF330Q9Y3S2 320 aaPredicted RBP5.3□□□□□ -1.56
UBE3A-202ENST00000397954 USP31Q70CQ4 1352 aa5.3□□□□□ -1.56
UBE3A-202ENST00000397954 MYOM1P52179 1685 aa5.3□□□□□ -1.56
UBE3A-202ENST00000397954 SNRKQ9NRH2 765 aa5.3□□□□□ -1.56
UBE3A-202ENST00000397954 POLR3EQ9NVU0 708 aa5.3□□□□□ -1.56
UBE3A-202ENST00000397954 QSER1Q2KHR3 1735 aa5.3□□□□□ -1.56
UBE3A-202ENST00000397954 NSD2O96028 1365 aa5.3□□□□□ -1.56
UBE3A-202ENST00000397954 EVC2Q86UK5 1308 aa5.3□□□□□ -1.56
UBE3A-202ENST00000397954 SH3D19Q5HYK7 790 aa5.3□□□□□ -1.56
UBE3A-202ENST00000397954 USP35Q9P2H5 1018 aa5.3□□□□□ -1.56
UBE3A-202ENST00000397954 SLIT2O94813 1529 aa5.29□□□□□ -1.56
UBE3A-202ENST00000397954 BCL9O00512 1426 aa5.29□□□□□ -1.56
UBE3A-202ENST00000397954 ATRNO75882 1429 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms