RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 C20orf194Q5TEA3 1177 aa12.37□□□□□ -0.43
APTX-207ENST00000397172 FAM13BQ9NYF5 915 aa12.37□□□□□ -0.43
APTX-207ENST00000397172 STK26Q9P289 416 aa12.37□□□□□ -0.43
APTX-207ENST00000397172 WDR43Q15061 677 aaKnown RBP eCLIP12.37□□□□□ -0.43
APTX-207ENST00000397172 ERBB4Q15303 1308 aa12.36□□□□□ -0.43
APTX-207ENST00000397172 CANXP27824 592 aaKnown RBP12.36□□□□□ -0.43
APTX-207ENST00000397172 NASPP49321 788 aaPredicted RBP12.36□□□□□ -0.43
APTX-207ENST00000397172 DMTNQ08495 405 aa12.36□□□□□ -0.43
APTX-207ENST00000397172 TRAK1Q9UPV9 953 aa12.36□□□□□ -0.43
APTX-207ENST00000397172 ZNF500O60304 480 aaPredicted RBP12.35□□□□□ -0.43
APTX-207ENST00000397172 DUSP27Q5VZP5 1158 aa12.35□□□□□ -0.43
APTX-207ENST00000397172 SENP3-EIF4A1A0A087X0R7 540 aa12.34□□□□□ -0.43
APTX-207ENST00000397172 LETM1O95202 739 aaPredicted RBP12.34□□□□□ -0.43
APTX-207ENST00000397172 CCDC94Q9BW85 323 aaPredicted RBP12.34□□□□□ -0.43
APTX-207ENST00000397172 C19orf44Q9H6X5 657 aa12.34□□□□□ -0.43
APTX-207ENST00000397172 PRAM1Q96QH2 718 aa12.34□□□□□ -0.43
APTX-207ENST00000397172 MSH6P52701 1360 aa12.33□□□□□ -0.44
APTX-207ENST00000397172 SASS6Q6UVJ0 657 aa12.33□□□□□ -0.44
APTX-207ENST00000397172 WAPLQ7Z5K2 1190 aa12.33□□□□□ -0.44
APTX-207ENST00000397172 CLUAP1Q96AJ1 413 aa12.33□□□□□ -0.44
APTX-207ENST00000397172 DCCP43146 1447 aa12.33□□□□□ -0.44
APTX-207ENST00000397172 ADGRL3Q9HAR2 1447 aa12.33□□□□□ -0.44
APTX-207ENST00000397172 XIRP1Q702N8 1843 aaKnown RBP12.33□□□□□ -0.44
APTX-207ENST00000397172 UQCRHLA0A096LP55 91 aa12.32□□□□□ -0.44
APTX-207ENST00000397172 UQCRHP07919 91 aa12.32□□□□□ -0.44
APTX-207ENST00000397172 RIPK4P57078 832 aa12.32□□□□□ -0.44
APTX-207ENST00000397172 C14orf37Q86TY3 774 aa12.32□□□□□ -0.44
APTX-207ENST00000397172 R3HCC1Q9Y3T6 440 aaKnown RBP12.32□□□□□ -0.44
APTX-207ENST00000397172 ARHGEF28Q8N1W1 1705 aaKnown RBP12.32□□□□□ -0.44
APTX-207ENST00000397172 PLEKHH1Q9ULM0 1364 aa12.32□□□□□ -0.44
APTX-207ENST00000397172 RBM33Q96EV2 1170 aaKnown RBP12.31□□□□□ -0.44
APTX-207ENST00000397172 NOL7Q9UMY1 257 aaKnown RBP12.31□□□□□ -0.44
APTX-207ENST00000397172 ST20-MTHFSA0A0A6YYL1 179 aa12.31□□□□□ -0.44
APTX-207ENST00000397172 E9PSI1 815 aa12.31□□□□□ -0.44
APTX-207ENST00000397172 PDIA4P13667 645 aaKnown RBP12.31□□□□□ -0.44
APTX-207ENST00000397172 SLFN5Q08AF3 891 aa12.31□□□□□ -0.44
APTX-207ENST00000397172 CADPS2Q86UW7 1296 aa12.31□□□□□ -0.44
APTX-207ENST00000397172 RWDD1Q9H446 243 aaPredicted RBP12.31□□□□□ -0.44
APTX-207ENST00000397172 SNX21Q969T3 373 aa12.3□□□□□ -0.44
APTX-207ENST00000397172 C22orf23Q9BZE7 217 aa12.3□□□□□ -0.44
APTX-207ENST00000397172 TOM1O60784 492 aa12.29□□□□□ -0.44
APTX-207ENST00000397172 ATF3P18847 181 aa12.29□□□□□ -0.44
APTX-207ENST00000397172 HMGN5P82970 282 aaKnown RBP12.29□□□□□ -0.44
APTX-207ENST00000397172 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.29□□□□□ -0.44
APTX-207ENST00000397172 BBXQ8WY36 941 aaPredicted RBP12.28□□□□□ -0.44
APTX-207ENST00000397172 CCDC39Q9UFE4 941 aa12.28□□□□□ -0.44
APTX-207ENST00000397172 ADGRB2O60241 1585 aa12.28□□□□□ -0.44
APTX-207ENST00000397172 ZNF521Q96K83 1311 aa12.28□□□□□ -0.44
APTX-207ENST00000397172 SBNO2Q9Y2G9 1366 aa12.28□□□□□ -0.44
APTX-207ENST00000397172 NALCNQ8IZF0 1738 aa12.28□□□□□ -0.44
APTX-207ENST00000397172 CDC42BPGQ6DT37 1551 aa12.28□□□□□ -0.44
APTX-207ENST00000397172 SEC24BO95487 1268 aa12.28□□□□□ -0.44
APTX-207ENST00000397172 RBM25P49756 843 aaKnown RBP12.28□□□□□ -0.44
APTX-207ENST00000397172 PER1O15534 1290 aaPredicted RBP12.27□□□□□ -0.45
APTX-207ENST00000397172 SAFB2Q14151 953 aaKnown RBP eCLIP12.27□□□□□ -0.45
APTX-207ENST00000397172 TAF7LQ5H9L4 462 aa12.27□□□□□ -0.45
APTX-207ENST00000397172 SMC5Q8IY18 1101 aa12.27□□□□□ -0.45
APTX-207ENST00000397172 TRMT2AQ8IZ69 625 aaKnown RBP12.27□□□□□ -0.45
APTX-207ENST00000397172 IGHDP01880 384 aa12.26□□□□□ -0.45
APTX-207ENST00000397172 UBAP1LF5GYI3 381 aa12.25□□□□□ -0.45
APTX-207ENST00000397172 HSP90AB1P08238 724 aaKnown RBP12.25□□□□□ -0.45
APTX-207ENST00000397172 RAB3GAP1Q15042 981 aa12.25□□□□□ -0.45
APTX-207ENST00000397172 KLHL40Q2TBA0 621 aa12.25□□□□□ -0.45
APTX-207ENST00000397172 MINK1Q8N4C8 1332 aaPredicted RBP12.25□□□□□ -0.45
APTX-207ENST00000397172 WASLO00401 505 aaPredicted RBP12.25□□□□□ -0.45
APTX-207ENST00000397172 PRIMPOLQ96LW4 560 aa12.25□□□□□ -0.45
APTX-207ENST00000397172 SLAIN2Q9P270 581 aa12.25□□□□□ -0.45
APTX-207ENST00000397172 QRICH2Q9H0J4 1663 aa12.24□□□□□ -0.45
APTX-207ENST00000397172 MST1RQ04912 1400 aa12.24□□□□□ -0.45
APTX-207ENST00000397172 ZNF445P59923 1031 aa12.24□□□□□ -0.45
APTX-207ENST00000397172 IPO4Q8TEX9 1081 aaKnown RBP12.24□□□□□ -0.45
APTX-207ENST00000397172 TNPO1Q92973 898 aaKnown RBP12.24□□□□□ -0.45
APTX-207ENST00000397172 ADAMTS8Q9UP79 889 aa12.24□□□□□ -0.45
APTX-207ENST00000397172 ZKSCAN5Q9Y2L8 839 aa12.24□□□□□ -0.45
APTX-207ENST00000397172 EVC2Q86UK5 1308 aa12.23□□□□□ -0.45
APTX-207ENST00000397172 TMF1P82094 1093 aa12.23□□□□□ -0.45
APTX-207ENST00000397172 PPP4R3BQ5MIZ7 849 aa12.23□□□□□ -0.45
APTX-207ENST00000397172 CLEC17AQ6ZS10 378 aa12.23□□□□□ -0.45
APTX-207ENST00000397172 ANKARQ7Z5J8 1434 aa12.23□□□□□ -0.45
APTX-207ENST00000397172 CC2D1BQ5T0F9 858 aaKnown RBP12.23□□□□□ -0.45
APTX-207ENST00000397172 SPRYD3Q8NCJ5 442 aa12.23□□□□□ -0.45
APTX-207ENST00000397172 TESK2Q96S53 571 aa12.23□□□□□ -0.45
APTX-207ENST00000397172 ZHX1Q9UKY1 873 aaPredicted RBP12.23□□□□□ -0.45
APTX-207ENST00000397172 C1orf167Q5SNV9 1468 aa12.22□□□□□ -0.45
APTX-207ENST00000397172 CDK11BP21127 795 aaKnown RBP12.22□□□□□ -0.45
APTX-207ENST00000397172 DDIT3P35638 169 aa12.22□□□□□ -0.45
APTX-207ENST00000397172 GAS2L3Q86XJ1 694 aa12.22□□□□□ -0.45
APTX-207ENST00000397172 FBXO41Q8TF61 875 aa12.22□□□□□ -0.45
APTX-207ENST00000397172 CFAP44Q96MT7 982 aa12.22□□□□□ -0.45
APTX-207ENST00000397172 PUS7Q96PZ0 661 aaKnown RBP12.22□□□□□ -0.45
APTX-207ENST00000397172 CDK19Q9BWU1 502 aa12.22□□□□□ -0.45
APTX-207ENST00000397172 TULP4Q9NRJ4 1543 aa12.22□□□□□ -0.45
APTX-207ENST00000397172 FMN2Q9NZ56 1722 aa12.22□□□□□ -0.45
APTX-207ENST00000397172 ZNF692Q9BU19 519 aaPredicted RBP12.21□□□□□ -0.45
APTX-207ENST00000397172 DDX49Q9Y6V7 483 aaKnown RBP12.21□□□□□ -0.45
APTX-207ENST00000397172 ZSCAN20P17040 1043 aaPredicted RBP12.2□□□□□ -0.46
APTX-207ENST00000397172 CDCA8Q53HL2 280 aa12.2□□□□□ -0.46
APTX-207ENST00000397172 PDLIM2Q96JY6 352 aa12.2□□□□□ -0.46
APTX-207ENST00000397172 NAP1L2Q9ULW6 460 aaPredicted RBP12.2□□□□□ -0.46
APTX-207ENST00000397172 PDZRN3Q9UPQ7 1066 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms