RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 KIAA1211Q6ZU35 1233 aa18.13■□□□□ 0.49
CCNF-202ENST00000397066 ARHGAP45Q92619 1136 aa18.13■□□□□ 0.49
CCNF-202ENST00000397066 KIF2CQ99661 725 aa18.13■□□□□ 0.49
CCNF-202ENST00000397066 ADGRB3O60242 1522 aa18.13■□□□□ 0.49
CCNF-202ENST00000397066 EMILIN1Q9Y6C2 1016 aa18.13■□□□□ 0.49
CCNF-202ENST00000397066 ARAP3Q8WWN8 1544 aa18.13■□□□□ 0.49
CCNF-202ENST00000397066 IFT57Q9NWB7 429 aa18.12■□□□□ 0.49
CCNF-202ENST00000397066 DCTN1Q14203 1278 aa18.12■□□□□ 0.49
CCNF-202ENST00000397066 PPRC1Q5VV67 1664 aaKnown RBP18.12■□□□□ 0.49
CCNF-202ENST00000397066 ZSCAN30Q86W11 494 aa18.12■□□□□ 0.49
CCNF-202ENST00000397066 C16orf71Q8IYS4 520 aaPredicted RBP18.12■□□□□ 0.49
CCNF-202ENST00000397066 INO80Q9ULG1 1556 aaPredicted RBP18.12■□□□□ 0.49
CCNF-202ENST00000397066 POLKQ9UBT6 870 aa18.11■□□□□ 0.49
CCNF-202ENST00000397066 ASXL2Q76L83 1435 aa18.11■□□□□ 0.49
CCNF-202ENST00000397066 NEURL4Q96JN8 1562 aa18.11■□□□□ 0.49
CCNF-202ENST00000397066 TPM2P07951 284 aa18.11■□□□□ 0.49
CCNF-202ENST00000397066 C8orf58Q8NAV2 365 aa18.11■□□□□ 0.49
CCNF-202ENST00000397066 TPRNQ4KMQ1 711 aa18.1■□□□□ 0.49
CCNF-202ENST00000397066 NOL8Q76FK4 1167 aaKnown RBP18.1■□□□□ 0.49
CCNF-202ENST00000397066 MYO3AQ8NEV4 1616 aa18.1■□□□□ 0.49
CCNF-202ENST00000397066 FAM83GA6ND36 823 aa18.1■□□□□ 0.49
CCNF-202ENST00000397066 TULP4Q9NRJ4 1543 aa18.1■□□□□ 0.49
CCNF-202ENST00000397066 PTMAP06454 111 aaKnown RBP18.1■□□□□ 0.49
CCNF-202ENST00000397066 SIRT2Q8IXJ6 389 aa18.1■□□□□ 0.49
CCNF-202ENST00000397066 NCOA3Q9Y6Q9 1424 aa18.1■□□□□ 0.49
CCNF-202ENST00000397066 SMARCA5O60264 1052 aaPredicted RBP18.09■□□□□ 0.49
CCNF-202ENST00000397066 PLEKHM2Q8IWE5 1019 aa18.09■□□□□ 0.49
CCNF-202ENST00000397066 SLC52A1Q9NWF4 448 aa18.09■□□□□ 0.49
CCNF-202ENST00000397066 SLC4A10Q6U841 1118 aa18.09■□□□□ 0.49
CCNF-202ENST00000397066 ADGRB1O14514 1584 aa18.09■□□□□ 0.49
CCNF-202ENST00000397066 REC8O95072 547 aa18.09■□□□□ 0.49
CCNF-202ENST00000397066 TTC22Q5TAA0 569 aa18.08■□□□□ 0.49
CCNF-202ENST00000397066 GSPT1P15170 499 aaKnown RBP18.08■□□□□ 0.48
CCNF-202ENST00000397066 WAPLQ7Z5K2 1190 aa18.07■□□□□ 0.48
CCNF-202ENST00000397066 COG3Q96JB2 828 aa18.07■□□□□ 0.48
CCNF-202ENST00000397066 HAP1P54257 671 aaPredicted RBP18.07■□□□□ 0.48
CCNF-202ENST00000397066 RRS1Q15050 365 aaKnown RBP18.07■□□□□ 0.48
CCNF-202ENST00000397066 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.07■□□□□ 0.48
CCNF-202ENST00000397066 ZBTB7CA1YPR0 619 aa18.07■□□□□ 0.48
CCNF-202ENST00000397066 R3HCC1Q9Y3T6 440 aaKnown RBP18.07■□□□□ 0.48
CCNF-202ENST00000397066 SOX12O15370 315 aa18.06■□□□□ 0.48
CCNF-202ENST00000397066 ZSCAN23Q3MJ62 389 aa18.06■□□□□ 0.48
CCNF-202ENST00000397066 GLI2P10070 1586 aa18.06■□□□□ 0.48
CCNF-202ENST00000397066 MROH1Q8NDA8 1641 aa18.06■□□□□ 0.48
CCNF-202ENST00000397066 FOXD4L6Q3SYB3 417 aaPredicted RBP18.06■□□□□ 0.48
CCNF-202ENST00000397066 FOXD4L3Q6VB84 417 aaPredicted RBP18.06■□□□□ 0.48
CCNF-202ENST00000397066 OTUD7AQ8TE49 926 aaPredicted RBP18.06■□□□□ 0.48
CCNF-202ENST00000397066 NME9Q86XW9 330 aa18.05■□□□□ 0.48
CCNF-202ENST00000397066 CWC22Q9HCG8 908 aaKnown RBP18.05■□□□□ 0.48
CCNF-202ENST00000397066 ADGRB2O60241 1585 aa18.05■□□□□ 0.48
CCNF-202ENST00000397066 RBM27Q9P2N5 1060 aaKnown RBP18.05■□□□□ 0.48
CCNF-202ENST00000397066 DCTPP1Q9H773 170 aa18.05■□□□□ 0.48
CCNF-202ENST00000397066 HMMRO75330 724 aa18.04■□□□□ 0.48
CCNF-202ENST00000397066 RBM10P98175 930 aaKnown RBP18.04■□□□□ 0.48
CCNF-202ENST00000397066 USP26Q9BXU7 913 aa18.04■□□□□ 0.48
CCNF-202ENST00000397066 RNF214Q8ND24 703 aa18.04■□□□□ 0.48
CCNF-202ENST00000397066 SDSP20132 328 aa18.04■□□□□ 0.48
CCNF-202ENST00000397066 BRPF1P55201 1214 aaPredicted RBP18.04■□□□□ 0.48
CCNF-202ENST00000397066 ZGPATQ8N5A5 531 aaKnown RBP18.04■□□□□ 0.48
CCNF-202ENST00000397066 ARID3AQ99856 593 aa18.04■□□□□ 0.48
CCNF-202ENST00000397066 ABCC4O15439 1325 aa18.04■□□□□ 0.48
CCNF-202ENST00000397066 NEK4P51957 841 aa18.03■□□□□ 0.48
CCNF-202ENST00000397066 PKP1Q13835 747 aa18.03■□□□□ 0.48
CCNF-202ENST00000397066 FAM13BQ9NYF5 915 aa18.03■□□□□ 0.48
CCNF-202ENST00000397066 PKNOX2Q96KN3 472 aa18.03■□□□□ 0.48
CCNF-202ENST00000397066 ZRANB1Q9UGI0 708 aa18.03■□□□□ 0.48
CCNF-202ENST00000397066 MCCP23508 829 aa18.02■□□□□ 0.48
CCNF-202ENST00000397066 RPAP2Q8IXW5 612 aaPredicted RBP18.02■□□□□ 0.48
CCNF-202ENST00000397066 USP32Q8NFA0 1604 aa18.02■□□□□ 0.48
CCNF-202ENST00000397066 ZFYVE9O95405 1425 aa18.02■□□□□ 0.48
CCNF-202ENST00000397066 TRIM6-TRIM34B2RNG4 842 aa18.02■□□□□ 0.47
CCNF-202ENST00000397066 DNTTIP2Q5QJE6 756 aaKnown RBP18.02■□□□□ 0.47
CCNF-202ENST00000397066 LMTK2Q8IWU2 1503 aa18.02■□□□□ 0.47
CCNF-202ENST00000397066 SYCE3A1L190 88 aa18.01■□□□□ 0.47
CCNF-202ENST00000397066 ERC2O15083 957 aa18.01■□□□□ 0.47
CCNF-202ENST00000397066 PPP1R9BQ96SB3 815 aa18.01■□□□□ 0.47
CCNF-202ENST00000397066 PRIM1P49642 420 aaKnown RBP18.01■□□□□ 0.47
CCNF-202ENST00000397066 KRT24Q2M2I5 525 aa18.01■□□□□ 0.47
CCNF-202ENST00000397066 OSCARQ8IYS5 282 aa18.01■□□□□ 0.47
CCNF-202ENST00000397066 FBXO31Q5XUX0 539 aaPredicted RBP18.01■□□□□ 0.47
CCNF-202ENST00000397066 ABCA9Q8IUA7 1624 aa18■□□□□ 0.47
CCNF-202ENST00000397066 RILPL2Q969X0 211 aa18■□□□□ 0.47
CCNF-202ENST00000397066 ZMYND15Q9H091 742 aa18■□□□□ 0.47
CCNF-202ENST00000397066 LMBRD1Q9NUN5 540 aa18■□□□□ 0.47
CCNF-202ENST00000397066 RBSNQ9H1K0 784 aa18■□□□□ 0.47
CCNF-202ENST00000397066 YTHDC2Q9H6S0 1430 aaKnown RBP18■□□□□ 0.47
CCNF-202ENST00000397066 IFT172Q9UG01 1749 aa18■□□□□ 0.47
CCNF-202ENST00000397066 XPCQ01831 940 aaPredicted RBP18■□□□□ 0.47
CCNF-202ENST00000397066 ANKRD44Q8N8A2 993 aa18■□□□□ 0.47
CCNF-202ENST00000397066 ABCF1Q8NE71 845 aaKnown RBP eCLIP18■□□□□ 0.47
CCNF-202ENST00000397066 SULT6B1Q6IMI4 303 aa17.99■□□□□ 0.47
CCNF-202ENST00000397066 SLC4A2P04920 1241 aa17.99■□□□□ 0.47
CCNF-202ENST00000397066 MCM10Q7L590 875 aa17.99■□□□□ 0.47
CCNF-202ENST00000397066 COL3A1P02461 1466 aaPredicted RBP17.98■□□□□ 0.47
CCNF-202ENST00000397066 IL13P35225 146 aa17.98■□□□□ 0.47
CCNF-202ENST00000397066 ZNF445P59923 1031 aa17.98■□□□□ 0.47
CCNF-202ENST00000397066 ANO2Q9NQ90 1003 aa17.98■□□□□ 0.47
CCNF-202ENST00000397066 OFD1O75665 1012 aa17.98■□□□□ 0.47
CCNF-202ENST00000397066 PPLO60437 1756 aa17.98■□□□□ 0.47
CCNF-202ENST00000397066 PNPLA6Q8IY17 1366 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms