RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 APAF1O14727 1248 aa17.99■□□□□ 0.47
MCF2L-209ENST00000397036 LRRC59Q96AG4 307 aaKnown RBP17.99■□□□□ 0.47
MCF2L-209ENST00000397036 AHDC1Q5TGY3 1603 aaPredicted RBP17.99■□□□□ 0.47
MCF2L-209ENST00000397036 CPDO75976 1380 aa17.99■□□□□ 0.47
MCF2L-209ENST00000397036 RSPH6AQ9H0K4 717 aa17.98■□□□□ 0.47
MCF2L-209ENST00000397036 PEAK1Q9H792 1746 aa17.98■□□□□ 0.47
MCF2L-209ENST00000397036 CCDC27Q2M243 656 aa17.98■□□□□ 0.47
MCF2L-209ENST00000397036 CCDC146Q8IYE0 955 aa17.98■□□□□ 0.47
MCF2L-209ENST00000397036 ZNF521Q96K83 1311 aa17.97■□□□□ 0.47
MCF2L-209ENST00000397036 TCP11L2Q8N4U5 519 aa17.97■□□□□ 0.47
MCF2L-209ENST00000397036 CERKQ8TCT0 537 aa17.96■□□□□ 0.47
MCF2L-209ENST00000397036 IGSF1Q8N6C5 1336 aa17.95■□□□□ 0.46
MCF2L-209ENST00000397036 KDRP35968 1356 aa17.95■□□□□ 0.46
MCF2L-209ENST00000397036 ABCC6O95255 1503 aa17.94■□□□□ 0.46
MCF2L-209ENST00000397036 NEFMP07197 916 aa17.94■□□□□ 0.46
MCF2L-209ENST00000397036 ROBO1Q9Y6N7 1651 aa17.94■□□□□ 0.46
MCF2L-209ENST00000397036 EYA1Q99502 592 aa17.93■□□□□ 0.46
MCF2L-209ENST00000397036 PRKAR2BP31323 418 aa17.93■□□□□ 0.46
MCF2L-209ENST00000397036 MAPK8IP3Q9UPT6 1336 aa17.92■□□□□ 0.46
MCF2L-209ENST00000397036 UBAP1LF5GYI3 381 aa17.92■□□□□ 0.46
MCF2L-209ENST00000397036 TMPOP42166 694 aaKnown RBP17.92■□□□□ 0.46
MCF2L-209ENST00000397036 SULT6B1Q6IMI4 303 aa17.92■□□□□ 0.46
MCF2L-209ENST00000397036 HMOX1P09601 288 aa17.91■□□□□ 0.46
MCF2L-209ENST00000397036 RGPD1P0DJD0 1748 aa17.91■□□□□ 0.46
MCF2L-209ENST00000397036 ZC3H6P61129 1189 aaKnown RBP17.91■□□□□ 0.46
MCF2L-209ENST00000397036 WDR63Q8IWG1 891 aa17.91■□□□□ 0.46
MCF2L-209ENST00000397036 CABLES1Q8TDN4 633 aa17.91■□□□□ 0.46
MCF2L-209ENST00000397036 WWC1Q8IX03 1113 aa17.9■□□□□ 0.46
MCF2L-209ENST00000397036 CRYBG1Q9Y4K1 1723 aa17.9■□□□□ 0.46
MCF2L-209ENST00000397036 AXIN2Q9Y2T1 843 aa17.89■□□□□ 0.45
MCF2L-209ENST00000397036 LTN1O94822 1766 aa17.88■□□□□ 0.45
MCF2L-209ENST00000397036 GOLGA2Q08379 1002 aa17.88■□□□□ 0.45
MCF2L-209ENST00000397036 NFE2L2Q16236 605 aa17.88■□□□□ 0.45
MCF2L-209ENST00000397036 SALL2Q9Y467 1007 aaPredicted RBP17.88■□□□□ 0.45
MCF2L-209ENST00000397036 NCAPD2Q15021 1401 aa17.88■□□□□ 0.45
MCF2L-209ENST00000397036 TRMT2AQ8IZ69 625 aaKnown RBP17.88■□□□□ 0.45
MCF2L-209ENST00000397036 PHACTR3Q96KR7 559 aa17.88■□□□□ 0.45
MCF2L-209ENST00000397036 KIAA0232Q92628 1395 aa17.87■□□□□ 0.45
MCF2L-209ENST00000397036 ERBB3P21860 1342 aa17.87■□□□□ 0.45
MCF2L-209ENST00000397036 AEBP1Q8IUX7 1158 aa17.87■□□□□ 0.45
MCF2L-209ENST00000397036 ANKRD24Q8TF21 1146 aa17.87■□□□□ 0.45
MCF2L-209ENST00000397036 NBPF6Q5VWK0 638 aa17.86■□□□□ 0.45
MCF2L-209ENST00000397036 NBPF4Q96M43 638 aa17.86■□□□□ 0.45
MCF2L-209ENST00000397036 E9PSI1 815 aa17.85■□□□□ 0.45
MCF2L-209ENST00000397036 RIPK4P57078 832 aa17.85■□□□□ 0.45
MCF2L-209ENST00000397036 PIP4K2BP78356 416 aa17.85■□□□□ 0.45
MCF2L-209ENST00000397036 SLFN5Q08AF3 891 aa17.85■□□□□ 0.45
MCF2L-209ENST00000397036 COL18A1P39060 1754 aa17.85■□□□□ 0.45
MCF2L-209ENST00000397036 PLEKHG2Q9H7P9 1386 aa17.85■□□□□ 0.45
MCF2L-209ENST00000397036 IL16Q14005 1332 aa17.84■□□□□ 0.45
MCF2L-209ENST00000397036 LMOD3Q0VAK6 560 aa17.84■□□□□ 0.45
MCF2L-209ENST00000397036 LTV1Q96GA3 475 aaPredicted RBP17.84■□□□□ 0.45
MCF2L-209ENST00000397036 PRDM11Q9NQV5 511 aa17.84■□□□□ 0.45
MCF2L-209ENST00000397036 TRIM35Q9UPQ4 493 aa17.84■□□□□ 0.45
MCF2L-209ENST00000397036 COL22A1Q8NFW1 1626 aaPredicted RBP17.84■□□□□ 0.45
MCF2L-209ENST00000397036 SENP3-EIF4A1A0A087X0R7 540 aa17.83■□□□□ 0.45
MCF2L-209ENST00000397036 ZBTB7CA1YPR0 619 aa17.83■□□□□ 0.45
MCF2L-209ENST00000397036 HAP1P54257 671 aaPredicted RBP17.83■□□□□ 0.45
MCF2L-209ENST00000397036 RRP7AQ9Y3A4 280 aaKnown RBP17.83■□□□□ 0.45
MCF2L-209ENST00000397036 COL16A1Q07092 1604 aaPredicted RBP17.83■□□□□ 0.44
MCF2L-209ENST00000397036 PLEKHG5O94827 1062 aa17.82■□□□□ 0.44
MCF2L-209ENST00000397036 CDCA7LQ96GN5 454 aa17.82■□□□□ 0.44
MCF2L-209ENST00000397036 NEUROD2Q15784 382 aa17.82■□□□□ 0.44
MCF2L-209ENST00000397036 DUSP27Q5VZP5 1158 aa17.82■□□□□ 0.44
MCF2L-209ENST00000397036 GAS2L2Q8NHY3 880 aa17.82■□□□□ 0.44
MCF2L-209ENST00000397036 HTATSF1O43719 755 aaKnown RBP17.81■□□□□ 0.44
MCF2L-209ENST00000397036 CALD1Q05682 793 aaKnown RBP17.81■□□□□ 0.44
MCF2L-209ENST00000397036 CHRNA2Q15822 529 aa17.81■□□□□ 0.44
MCF2L-209ENST00000397036 FAM83GA6ND36 823 aa17.79■□□□□ 0.44
MCF2L-209ENST00000397036 PHLPP1O60346 1717 aa17.79■□□□□ 0.44
MCF2L-209ENST00000397036 AMOTQ4VCS5 1084 aa17.78■□□□□ 0.44
MCF2L-209ENST00000397036 WDR17Q8IZU2 1322 aa17.78■□□□□ 0.44
MCF2L-209ENST00000397036 ABCA3Q99758 1704 aa17.78■□□□□ 0.44
MCF2L-209ENST00000397036 CAMTA1Q9Y6Y1 1673 aa17.77■□□□□ 0.44
MCF2L-209ENST00000397036 MTHFSDQ2M296 383 aaKnown RBP17.77■□□□□ 0.44
MCF2L-209ENST00000397036 SPINK5Q9NQ38 1064 aaPredicted RBP17.77■□□□□ 0.44
MCF2L-209ENST00000397036 JCADQ9P266 1359 aa17.77■□□□□ 0.44
MCF2L-209ENST00000397036 LMO7Q8WWI1 1683 aa17.77■□□□□ 0.43
MCF2L-209ENST00000397036 MYH16Q9H6N6 1097 aa17.77■□□□□ 0.43
MCF2L-209ENST00000397036 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.77■□□□□ 0.43
MCF2L-209ENST00000397036 PLEKHO1Q53GL0 409 aaPredicted RBP17.76■□□□□ 0.43
MCF2L-209ENST00000397036 NLRP2Q9NX02 1062 aa17.76■□□□□ 0.43
MCF2L-209ENST00000397036 CSB-PGBD3P0DP91 1061 aa17.75■□□□□ 0.43
MCF2L-209ENST00000397036 USHBP1Q8N6Y0 703 aa17.75■□□□□ 0.43
MCF2L-209ENST00000397036 CARD10Q9BWT7 1032 aa17.75■□□□□ 0.43
MCF2L-209ENST00000397036 COL5A2P05997 1499 aaPredicted RBP17.75■□□□□ 0.43
MCF2L-209ENST00000397036 FAM208AQ9UK61 1670 aaKnown RBP17.74■□□□□ 0.43
MCF2L-209ENST00000397036 ZNF853P0CG23 659 aa17.73■□□□□ 0.43
MCF2L-209ENST00000397036 RAPGEF4Q8WZA2 1011 aa17.72■□□□□ 0.43
MCF2L-209ENST00000397036 IFT57Q9NWB7 429 aa17.72■□□□□ 0.43
MCF2L-209ENST00000397036 RNF123Q5XPI4 1314 aa17.72■□□□□ 0.43
MCF2L-209ENST00000397036 GNAT3A8MTJ3 354 aa17.72■□□□□ 0.43
MCF2L-209ENST00000397036 CT47B1P0C2W7 299 aaPredicted RBP17.72■□□□□ 0.43
MCF2L-209ENST00000397036 EVA1CP58658 441 aa17.72■□□□□ 0.43
MCF2L-209ENST00000397036 GNAI1P63096 354 aa17.72■□□□□ 0.43
MCF2L-209ENST00000397036 SPATA31A6Q5VVP1 1343 aa17.72■□□□□ 0.43
MCF2L-209ENST00000397036 RGPD5Q99666 1765 aa17.71■□□□□ 0.43
MCF2L-209ENST00000397036 TATP17735 454 aaPredicted RBP17.71■□□□□ 0.43
MCF2L-209ENST00000397036 RTF1Q92541 710 aaKnown RBP17.71■□□□□ 0.43
MCF2L-209ENST00000397036 CFAP44Q96MT7 982 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms