RNA–Protein interactions for RNA: ENST00000397012.6

PPARG-206, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPARG, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-206ENST00000397012 ERICH6BQ5W0A0 696 aa17.54■□□□□ 0.4
PPARG-206ENST00000397012 KRT28Q7Z3Y7 464 aa17.54■□□□□ 0.4
PPARG-206ENST00000397012 PHRF1Q9P1Y6 1649 aaKnown RBP17.54■□□□□ 0.4
PPARG-206ENST00000397012 SLIT3O75094 1523 aa17.53■□□□□ 0.4
PPARG-206ENST00000397012 LTN1O94822 1766 aa17.53■□□□□ 0.4
PPARG-206ENST00000397012 PRKAR2BP31323 418 aa17.53■□□□□ 0.4
PPARG-206ENST00000397012 NEUROD2Q15784 382 aa17.53■□□□□ 0.4
PPARG-206ENST00000397012 SOX12O15370 315 aa17.52■□□□□ 0.4
PPARG-206ENST00000397012 HMOX1P09601 288 aa17.52■□□□□ 0.39
PPARG-206ENST00000397012 KCNH5Q8NCM2 988 aa17.52■□□□□ 0.39
PPARG-206ENST00000397012 RTL1A6NKG5 1358 aa17.52■□□□□ 0.39
PPARG-206ENST00000397012 TRIM35Q9UPQ4 493 aa17.51■□□□□ 0.39
PPARG-206ENST00000397012 AMPHP49418 695 aa17.5■□□□□ 0.39
PPARG-206ENST00000397012 USP19O94966 1318 aa17.5■□□□□ 0.39
PPARG-206ENST00000397012 XPCQ01831 940 aaPredicted RBP17.5■□□□□ 0.39
PPARG-206ENST00000397012 ARHGEF10O15013 1369 aa17.49■□□□□ 0.39
PPARG-206ENST00000397012 NEFMP07197 916 aa17.49■□□□□ 0.39
PPARG-206ENST00000397012 HOXC9P31274 260 aa17.49■□□□□ 0.39
PPARG-206ENST00000397012 PHACTR3Q96KR7 559 aa17.49■□□□□ 0.39
PPARG-206ENST00000397012 NPHP3Q7Z494 1330 aa17.49■□□□□ 0.39
PPARG-206ENST00000397012 DLG5Q8TDM6 1919 aa17.48■□□□□ 0.39
PPARG-206ENST00000397012 RIPK4P57078 832 aa17.48■□□□□ 0.39
PPARG-206ENST00000397012 PXDNQ92626 1479 aa17.48■□□□□ 0.39
PPARG-206ENST00000397012 KDRP35968 1356 aa17.47■□□□□ 0.39
PPARG-206ENST00000397012 IL16Q14005 1332 aa17.47■□□□□ 0.39
PPARG-206ENST00000397012 IRX6P78412 446 aaPredicted RBP17.47■□□□□ 0.39
PPARG-206ENST00000397012 NFE2L2Q16236 605 aa17.47■□□□□ 0.39
PPARG-206ENST00000397012 RRP1P56182 461 aaKnown RBP17.47■□□□□ 0.39
PPARG-206ENST00000397012 IGSF1Q8N6C5 1336 aa17.46■□□□□ 0.39
PPARG-206ENST00000397012 GCP02774 474 aa17.46■□□□□ 0.39
PPARG-206ENST00000397012 SULT6B1Q6IMI4 303 aa17.46■□□□□ 0.39
PPARG-206ENST00000397012 IP6K1Q92551 441 aa17.46■□□□□ 0.39
PPARG-206ENST00000397012 BRINP3Q76B58 766 aa17.45■□□□□ 0.38
PPARG-206ENST00000397012 MED1Q15648 1581 aaPredicted RBP17.45■□□□□ 0.38
PPARG-206ENST00000397012 AEBP1Q8IUX7 1158 aa17.45■□□□□ 0.38
PPARG-206ENST00000397012 SLAIN2Q9P270 581 aa17.45■□□□□ 0.38
PPARG-206ENST00000397012 EYA1Q99502 592 aa17.44■□□□□ 0.38
PPARG-206ENST00000397012 ARHGEF25Q86VW2 580 aa17.43■□□□□ 0.38
PPARG-206ENST00000397012 MYH16Q9H6N6 1097 aa17.43■□□□□ 0.38
PPARG-206ENST00000397012 TNS3Q68CZ2 1445 aa17.43■□□□□ 0.38
PPARG-206ENST00000397012 DDX17Q92841 729 aaKnown RBP17.43■□□□□ 0.38
PPARG-206ENST00000397012 CRYBG1Q9Y4K1 1723 aa17.42■□□□□ 0.38
PPARG-206ENST00000397012 SPATA31A3Q5VYP0 1347 aa17.42■□□□□ 0.38
PPARG-206ENST00000397012 LMOD2Q6P5Q4 547 aa17.41■□□□□ 0.38
PPARG-206ENST00000397012 LMOD3Q0VAK6 560 aa17.4■□□□□ 0.38
PPARG-206ENST00000397012 SOS2Q07890 1332 aaPredicted RBP17.39■□□□□ 0.38
PPARG-206ENST00000397012 PPP4R2Q9NY27 417 aa17.39■□□□□ 0.37
PPARG-206ENST00000397012 LTBP4Q8N2S1 1624 aa17.39■□□□□ 0.37
PPARG-206ENST00000397012 NHSL1Q5SYE7 1610 aa17.38■□□□□ 0.37
PPARG-206ENST00000397012 FANCIQ9NVI1 1328 aa17.38■□□□□ 0.37
PPARG-206ENST00000397012 CALD1Q05682 793 aaKnown RBP17.38■□□□□ 0.37
PPARG-206ENST00000397012 RGPD2P0DJD1 1756 aa17.37■□□□□ 0.37
PPARG-206ENST00000397012 CT47B1P0C2W7 299 aaPredicted RBP17.37■□□□□ 0.37
PPARG-206ENST00000397012 COL18A1P39060 1754 aa17.36■□□□□ 0.37
PPARG-206ENST00000397012 NCAPD2Q15021 1401 aa17.36■□□□□ 0.37
PPARG-206ENST00000397012 CAMTA1Q9Y6Y1 1673 aa17.36■□□□□ 0.37
PPARG-206ENST00000397012 RGPD5Q99666 1765 aa17.36■□□□□ 0.37
PPARG-206ENST00000397012 ABCC6O95255 1503 aa17.36■□□□□ 0.37
PPARG-206ENST00000397012 ZNF853P0CG23 659 aa17.35■□□□□ 0.37
PPARG-206ENST00000397012 PLIN1O60240 522 aa17.34■□□□□ 0.37
PPARG-206ENST00000397012 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.34■□□□□ 0.37
PPARG-206ENST00000397012 TSR2Q969E8 191 aaKnown RBP17.34■□□□□ 0.37
PPARG-206ENST00000397012 LTV1Q96GA3 475 aaPredicted RBP17.34■□□□□ 0.37
PPARG-206ENST00000397012 IFT57Q9NWB7 429 aa17.34■□□□□ 0.37
PPARG-206ENST00000397012 MTHFSDQ2M296 383 aaKnown RBP17.33■□□□□ 0.37
PPARG-206ENST00000397012 BCAR3O75815 825 aa17.33■□□□□ 0.36
PPARG-206ENST00000397012 RARSP54136 660 aaKnown RBP17.33■□□□□ 0.36
PPARG-206ENST00000397012 GNAI1P63096 354 aa17.33■□□□□ 0.36
PPARG-206ENST00000397012 NBPF6Q5VWK0 638 aa17.33■□□□□ 0.36
PPARG-206ENST00000397012 NBPF4Q96M43 638 aa17.33■□□□□ 0.36
PPARG-206ENST00000397012 AXIN2Q9Y2T1 843 aa17.33■□□□□ 0.36
PPARG-206ENST00000397012 CPDO75976 1380 aa17.32■□□□□ 0.36
PPARG-206ENST00000397012 GAS2L2Q8NHY3 880 aa17.32■□□□□ 0.36
PPARG-206ENST00000397012 THUMPD2Q9BTF0 503 aaKnown RBP17.32■□□□□ 0.36
PPARG-206ENST00000397012 LMO7Q8WWI1 1683 aa17.32■□□□□ 0.36
PPARG-206ENST00000397012 FAM83GA6ND36 823 aa17.31■□□□□ 0.36
PPARG-206ENST00000397012 EXOSC9Q06265 439 aaKnown RBP17.31■□□□□ 0.36
PPARG-206ENST00000397012 CFAP44Q96MT7 982 aa17.31■□□□□ 0.36
PPARG-206ENST00000397012 ZBTB7CA1YPR0 619 aa17.31■□□□□ 0.36
PPARG-206ENST00000397012 ZC3H6P61129 1189 aaKnown RBP17.31■□□□□ 0.36
PPARG-206ENST00000397012 HTATSF1O43719 755 aaKnown RBP17.3■□□□□ 0.36
PPARG-206ENST00000397012 ANKRD24Q8TF21 1146 aa17.3■□□□□ 0.36
PPARG-206ENST00000397012 ABCA3Q99758 1704 aa17.3■□□□□ 0.36
PPARG-206ENST00000397012 CABLES1Q8TDN4 633 aa17.3■□□□□ 0.36
PPARG-206ENST00000397012 ERBB3P21860 1342 aa17.29■□□□□ 0.36
PPARG-206ENST00000397012 PLEKHG5O94827 1062 aa17.29■□□□□ 0.36
PPARG-206ENST00000397012 DCTN1Q14203 1278 aa17.29■□□□□ 0.36
PPARG-206ENST00000397012 EXOC6Q8TAG9 804 aa17.29■□□□□ 0.36
PPARG-206ENST00000397012 LRRC59Q96AG4 307 aaKnown RBP17.28■□□□□ 0.36
PPARG-206ENST00000397012 FAM208AQ9UK61 1670 aaKnown RBP17.28■□□□□ 0.36
PPARG-206ENST00000397012 CRB1P82279 1406 aa17.28■□□□□ 0.36
PPARG-206ENST00000397012 C20orf194Q5TEA3 1177 aa17.28■□□□□ 0.36
PPARG-206ENST00000397012 USHBP1Q8N6Y0 703 aa17.28■□□□□ 0.36
PPARG-206ENST00000397012 LRRC37A3O60309 1634 aa17.28■□□□□ 0.36
PPARG-206ENST00000397012 ROBO1Q9Y6N7 1651 aa17.27■□□□□ 0.36
PPARG-206ENST00000397012 MBIPQ9NS73 344 aa17.27■□□□□ 0.36
PPARG-206ENST00000397012 ZNF428Q96B54 188 aa17.26■□□□□ 0.35
PPARG-206ENST00000397012 AHDC1Q5TGY3 1603 aaPredicted RBP17.26■□□□□ 0.35
PPARG-206ENST00000397012 CHL1O00533 1208 aa17.26■□□□□ 0.35
PPARG-206ENST00000397012 PDE3AQ14432 1141 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms