RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 LRRC7Q96NW7 1537 aa12.28□□□□□ -0.44
TRIM39-203ENST00000396547 NASPP49321 788 aaPredicted RBP12.28□□□□□ -0.44
TRIM39-203ENST00000396547 WDR63Q8IWG1 891 aa12.28□□□□□ -0.44
TRIM39-203ENST00000396547 NGEFQ8N5V2 710 aa12.28□□□□□ -0.44
TRIM39-203ENST00000396547 STAC3Q96MF2 364 aa12.28□□□□□ -0.44
TRIM39-203ENST00000396547 ZNF692Q9BU19 519 aaPredicted RBP12.28□□□□□ -0.44
TRIM39-203ENST00000396547 ELL2O00472 640 aaPredicted RBP12.27□□□□□ -0.44
TRIM39-203ENST00000396547 MSNP26038 577 aaKnown RBP12.27□□□□□ -0.44
TRIM39-203ENST00000396547 FOXD4L5Q5VV16 416 aaPredicted RBP12.27□□□□□ -0.45
TRIM39-203ENST00000396547 FOXD4L4Q8WXT5 416 aaPredicted RBP12.27□□□□□ -0.45
TRIM39-203ENST00000396547 NSD3Q9BZ95 1437 aa12.27□□□□□ -0.45
TRIM39-203ENST00000396547 LTKP29376 864 aa12.26□□□□□ -0.45
TRIM39-203ENST00000396547 R3HCC1Q9Y3T6 440 aaKnown RBP12.26□□□□□ -0.45
TRIM39-203ENST00000396547 TBX22Q9Y458 520 aa12.26□□□□□ -0.45
TRIM39-203ENST00000396547 DDX19BQ9UMR2 479 aa12.26□□□□□ -0.45
TRIM39-203ENST00000396547 EID1Q9Y6B2 187 aa12.26□□□□□ -0.45
TRIM39-203ENST00000396547 GOLGA6L22H0YM25 854 aa12.26□□□□□ -0.45
TRIM39-203ENST00000396547 TPRNQ4KMQ1 711 aa12.26□□□□□ -0.45
TRIM39-203ENST00000396547 CERKQ8TCT0 537 aa12.26□□□□□ -0.45
TRIM39-203ENST00000396547 MCTP1Q6DN14 999 aa12.25□□□□□ -0.45
TRIM39-203ENST00000396547 ATF7IPQ6VMQ6 1270 aa12.25□□□□□ -0.45
TRIM39-203ENST00000396547 TECPR2O15040 1411 aa12.25□□□□□ -0.45
TRIM39-203ENST00000396547 AAMPQ13685 434 aa12.24□□□□□ -0.45
TRIM39-203ENST00000396547 CAVIN1Q6NZI2 390 aaKnown RBP12.24□□□□□ -0.45
TRIM39-203ENST00000396547 APBB1O00213 710 aa12.24□□□□□ -0.45
TRIM39-203ENST00000396547 GAS2L2Q8NHY3 880 aa12.24□□□□□ -0.45
TRIM39-203ENST00000396547 PTCH1Q13635 1447 aa12.23□□□□□ -0.45
TRIM39-203ENST00000396547 CHD1LQ86WJ1 897 aa12.23□□□□□ -0.45
TRIM39-203ENST00000396547 FBXO41Q8TF61 875 aa12.23□□□□□ -0.45
TRIM39-203ENST00000396547 POLR3AO14802 1390 aaPredicted RBP12.23□□□□□ -0.45
TRIM39-203ENST00000396547 RAB3GAP1Q15042 981 aa12.23□□□□□ -0.45
TRIM39-203ENST00000396547 SKOR2Q2VWA4 1001 aaPredicted RBP12.23□□□□□ -0.45
TRIM39-203ENST00000396547 PLPPR3Q6T4P5 718 aa12.23□□□□□ -0.45
TRIM39-203ENST00000396547 DCCP43146 1447 aa12.23□□□□□ -0.45
TRIM39-203ENST00000396547 TXNDC2Q86VQ3 553 aa12.22□□□□□ -0.45
TRIM39-203ENST00000396547 MPNDQ8N594 471 aa12.22□□□□□ -0.45
TRIM39-203ENST00000396547 GGNBP2Q9H3C7 697 aa12.22□□□□□ -0.45
TRIM39-203ENST00000396547 DLC1Q96QB1 1528 aa12.22□□□□□ -0.45
TRIM39-203ENST00000396547 RIPK4P57078 832 aa12.22□□□□□ -0.45
TRIM39-203ENST00000396547 XPCQ01831 940 aaPredicted RBP12.22□□□□□ -0.45
TRIM39-203ENST00000396547 CHAMP1Q96JM3 812 aa12.22□□□□□ -0.45
TRIM39-203ENST00000396547 NPC1L1Q9UHC9 1359 aa12.22□□□□□ -0.45
TRIM39-203ENST00000396547 TPM2P07951 284 aa12.22□□□□□ -0.45
TRIM39-203ENST00000396547 KCNA6P17658 529 aa12.22□□□□□ -0.45
TRIM39-203ENST00000396547 HDAC1Q13547 482 aaPredicted RBP12.22□□□□□ -0.45
TRIM39-203ENST00000396547 K7ELQ4 463 aaPredicted RBP12.21□□□□□ -0.45
TRIM39-203ENST00000396547 SMC5Q8IY18 1101 aa12.21□□□□□ -0.45
TRIM39-203ENST00000396547 CALD1Q05682 793 aaKnown RBP12.21□□□□□ -0.46
TRIM39-203ENST00000396547 ZSCAN30Q86W11 494 aa12.21□□□□□ -0.46
TRIM39-203ENST00000396547 CABP2Q9NPB3 220 aa12.21□□□□□ -0.46
TRIM39-203ENST00000396547 CCDC173Q0VFZ6 552 aa12.2□□□□□ -0.46
TRIM39-203ENST00000396547 TMPOP42166 694 aaKnown RBP12.2□□□□□ -0.46
TRIM39-203ENST00000396547 RBM25P49756 843 aaKnown RBP12.2□□□□□ -0.46
TRIM39-203ENST00000396547 TBC1D9Q6ZT07 1266 aa12.2□□□□□ -0.46
TRIM39-203ENST00000396547 RBM27Q9P2N5 1060 aaKnown RBP12.2□□□□□ -0.46
TRIM39-203ENST00000396547 BAG4O95429 457 aaKnown RBP12.2□□□□□ -0.46
TRIM39-203ENST00000396547 NUCB1Q02818 461 aa12.2□□□□□ -0.46
TRIM39-203ENST00000396547 FOXD4L6Q3SYB3 417 aaPredicted RBP12.2□□□□□ -0.46
TRIM39-203ENST00000396547 FOXD4L3Q6VB84 417 aaPredicted RBP12.2□□□□□ -0.46
TRIM39-203ENST00000396547 ZBTB40Q9NUA8 1239 aa12.2□□□□□ -0.46
TRIM39-203ENST00000396547 STK26Q9P289 416 aa12.2□□□□□ -0.46
TRIM39-203ENST00000396547 SNX21Q969T3 373 aa12.19□□□□□ -0.46
TRIM39-203ENST00000396547 PDCL3Q9H2J4 239 aa12.19□□□□□ -0.46
TRIM39-203ENST00000396547 IPO8O15397 1037 aaKnown RBP12.19□□□□□ -0.46
TRIM39-203ENST00000396547 RNF214Q8ND24 703 aa12.19□□□□□ -0.46
TRIM39-203ENST00000396547 THUMPD2Q9BTF0 503 aaKnown RBP12.19□□□□□ -0.46
TRIM39-203ENST00000396547 VIRMAQ69YN4 1812 aaKnown RBP12.18□□□□□ -0.46
TRIM39-203ENST00000396547 PRPF40AO75400 957 aaKnown RBP12.18□□□□□ -0.46
TRIM39-203ENST00000396547 PKP1Q13835 747 aa12.18□□□□□ -0.46
TRIM39-203ENST00000396547 ISY1Q9ULR0 285 aaKnown RBP12.18□□□□□ -0.46
TRIM39-203ENST00000396547 ADGRB2O60241 1585 aa12.18□□□□□ -0.46
TRIM39-203ENST00000396547 FBLN1P23142 703 aa12.18□□□□□ -0.46
TRIM39-203ENST00000396547 KIF2CQ99661 725 aa12.18□□□□□ -0.46
TRIM39-203ENST00000396547 CIZ1Q9ULV3 898 aaPredicted RBP12.18□□□□□ -0.46
TRIM39-203ENST00000396547 PTPRUQ92729 1446 aa12.18□□□□□ -0.46
TRIM39-203ENST00000396547 DDIT3P35638 169 aa12.18□□□□□ -0.46
TRIM39-203ENST00000396547 SIRT1Q96EB6 747 aa12.18□□□□□ -0.46
TRIM39-203ENST00000396547 PHF23Q9BUL5 403 aaPredicted RBP12.18□□□□□ -0.46
TRIM39-203ENST00000396547 ZNF335Q9H4Z2 1342 aaPredicted RBP12.17□□□□□ -0.46
TRIM39-203ENST00000396547 ADGRB1O14514 1584 aa12.17□□□□□ -0.46
TRIM39-203ENST00000396547 TRIM35Q9UPQ4 493 aa12.17□□□□□ -0.46
TRIM39-203ENST00000396547 MYOM1P52179 1685 aa12.17□□□□□ -0.46
TRIM39-203ENST00000396547 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.16□□□□□ -0.46
TRIM39-203ENST00000396547 NALCNQ8IZF0 1738 aa12.16□□□□□ -0.46
TRIM39-203ENST00000396547 VGFO15240 615 aaPredicted RBP12.16□□□□□ -0.46
TRIM39-203ENST00000396547 SRPK2P78362 688 aaKnown RBP12.16□□□□□ -0.46
TRIM39-203ENST00000396547 NOL8Q76FK4 1167 aaKnown RBP12.16□□□□□ -0.46
TRIM39-203ENST00000396547 RBSNQ9H1K0 784 aa12.16□□□□□ -0.46
TRIM39-203ENST00000396547 OFD1O75665 1012 aa12.16□□□□□ -0.46
TRIM39-203ENST00000396547 PRIM1P49642 420 aaKnown RBP12.16□□□□□ -0.46
TRIM39-203ENST00000396547 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.16□□□□□ -0.46
TRIM39-203ENST00000396547 PRDM10Q9NQV6 1147 aa12.16□□□□□ -0.46
TRIM39-203ENST00000396547 CDC42BPGQ6DT37 1551 aa12.15□□□□□ -0.46
TRIM39-203ENST00000396547 CCDC27Q2M243 656 aa12.15□□□□□ -0.46
TRIM39-203ENST00000396547 FAM135BQ49AJ0 1406 aa12.15□□□□□ -0.46
TRIM39-203ENST00000396547 UQCRHLA0A096LP55 91 aa12.15□□□□□ -0.46
TRIM39-203ENST00000396547 PTMAP06454 111 aaKnown RBP12.15□□□□□ -0.46
TRIM39-203ENST00000396547 UQCRHP07919 91 aa12.15□□□□□ -0.46
TRIM39-203ENST00000396547 ZSCAN23Q3MJ62 389 aa12.15□□□□□ -0.46
TRIM39-203ENST00000396547 C16orf71Q8IYS4 520 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms