RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 PPIP5K1Q6PFW1 1433 aa20.28■□□□□ 0.84
CCHCR1-202ENST00000396263 PTPRUQ92729 1446 aa20.27■□□□□ 0.84
CCHCR1-202ENST00000396263 ITPRIPQ8IWB1 547 aa20.27■□□□□ 0.84
CCHCR1-202ENST00000396263 CPSF1Q10570 1443 aaKnown RBP20.27■□□□□ 0.83
CCHCR1-202ENST00000396263 IPO8O15397 1037 aaKnown RBP20.27■□□□□ 0.83
CCHCR1-202ENST00000396263 ZNF428Q96B54 188 aa20.26■□□□□ 0.83
CCHCR1-202ENST00000396263 EDC4Q6P2E9 1401 aaKnown RBP20.26■□□□□ 0.83
CCHCR1-202ENST00000396263 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.26■□□□□ 0.83
CCHCR1-202ENST00000396263 ROBO2Q9HCK4 1378 aa20.25■□□□□ 0.83
CCHCR1-202ENST00000396263 PRKAR2BP31323 418 aa20.25■□□□□ 0.83
CCHCR1-202ENST00000396263 BRPF1P55201 1214 aaPredicted RBP20.25■□□□□ 0.83
CCHCR1-202ENST00000396263 TMEM57Q8N5G2 664 aa20.25■□□□□ 0.83
CCHCR1-202ENST00000396263 DIP2AQ14689 1571 aa20.24■□□□□ 0.83
CCHCR1-202ENST00000396263 SMC5Q8IY18 1101 aa20.24■□□□□ 0.83
CCHCR1-202ENST00000396263 ZBTB40Q9NUA8 1239 aa20.24■□□□□ 0.83
CCHCR1-202ENST00000396263 FRAT2O75474 233 aaPredicted RBP20.24■□□□□ 0.83
CCHCR1-202ENST00000396263 CDK12Q9NYV4 1490 aaPredicted RBP20.23■□□□□ 0.83
CCHCR1-202ENST00000396263 WASLO00401 505 aaPredicted RBP20.22■□□□□ 0.83
CCHCR1-202ENST00000396263 NFE2L2Q16236 605 aa20.22■□□□□ 0.83
CCHCR1-202ENST00000396263 SIRT1Q96EB6 747 aa20.22■□□□□ 0.83
CCHCR1-202ENST00000396263 AATKQ6ZMQ8 1374 aa20.22■□□□□ 0.83
CCHCR1-202ENST00000396263 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.21■□□□□ 0.83
CCHCR1-202ENST00000396263 TBX22Q9Y458 520 aa20.21■□□□□ 0.83
CCHCR1-202ENST00000396263 MON2Q7Z3U7 1717 aa20.21■□□□□ 0.83
CCHCR1-202ENST00000396263 CALD1Q05682 793 aaKnown RBP20.2■□□□□ 0.82
CCHCR1-202ENST00000396263 FBLN1P23142 703 aa20.2■□□□□ 0.82
CCHCR1-202ENST00000396263 IL13P35225 146 aa20.19■□□□□ 0.82
CCHCR1-202ENST00000396263 XRN1Q8IZH2 1706 aaKnown RBP20.19■□□□□ 0.82
CCHCR1-202ENST00000396263 PHACTR3Q96KR7 559 aa20.18■□□□□ 0.82
CCHCR1-202ENST00000396263 ANTXR1Q9H6X2 564 aa20.17■□□□□ 0.82
CCHCR1-202ENST00000396263 EMILIN1Q9Y6C2 1016 aa20.17■□□□□ 0.82
CCHCR1-202ENST00000396263 AKAP12Q02952 1782 aa20.17■□□□□ 0.82
CCHCR1-202ENST00000396263 IFT57Q9NWB7 429 aa20.17■□□□□ 0.82
CCHCR1-202ENST00000396263 AMOTL2Q9Y2J4 779 aa20.17■□□□□ 0.82
CCHCR1-202ENST00000396263 PIK3R4Q99570 1358 aa20.16■□□□□ 0.82
CCHCR1-202ENST00000396263 HMOX1P09601 288 aa20.16■□□□□ 0.82
CCHCR1-202ENST00000396263 ARHGAP45Q92619 1136 aa20.16■□□□□ 0.82
CCHCR1-202ENST00000396263 TBC1D2Q9BYX2 928 aa20.16■□□□□ 0.82
CCHCR1-202ENST00000396263 PTCH1Q13635 1447 aa20.16■□□□□ 0.82
CCHCR1-202ENST00000396263 ANKLE2Q86XL3 938 aa20.16■□□□□ 0.82
CCHCR1-202ENST00000396263 VAMP4O75379 141 aa20.15■□□□□ 0.82
CCHCR1-202ENST00000396263 NME9Q86XW9 330 aa20.15■□□□□ 0.82
CCHCR1-202ENST00000396263 DLG5Q8TDM6 1919 aa20.15■□□□□ 0.82
CCHCR1-202ENST00000396263 ZNF853P0CG23 659 aa20.15■□□□□ 0.82
CCHCR1-202ENST00000396263 GNAI1P63096 354 aa20.15■□□□□ 0.82
CCHCR1-202ENST00000396263 NUCB1Q02818 461 aa20.15■□□□□ 0.82
CCHCR1-202ENST00000396263 NUDT16Q96DE0 195 aaKnown RBP20.14■□□□□ 0.82
CCHCR1-202ENST00000396263 ITSN1Q15811 1721 aa20.14■□□□□ 0.81
CCHCR1-202ENST00000396263 MRPL50Q8N5N7 158 aaKnown RBP20.14■□□□□ 0.81
CCHCR1-202ENST00000396263 CHMP4BQ9H444 224 aaKnown RBP20.14■□□□□ 0.81
CCHCR1-202ENST00000396263 C22orf23Q9BZE7 217 aa20.13■□□□□ 0.81
CCHCR1-202ENST00000396263 CCDC61Q9Y6R9 512 aa20.13■□□□□ 0.81
CCHCR1-202ENST00000396263 SLKQ9H2G2 1235 aaPredicted RBP20.13■□□□□ 0.81
CCHCR1-202ENST00000396263 COG3Q96JB2 828 aa20.12■□□□□ 0.81
CCHCR1-202ENST00000396263 LMOD3Q0VAK6 560 aa20.12■□□□□ 0.81
CCHCR1-202ENST00000396263 CHD2O14647 1828 aaKnown RBP20.11■□□□□ 0.81
CCHCR1-202ENST00000396263 ZBTB7BO15156 539 aaPredicted RBP20.11■□□□□ 0.81
CCHCR1-202ENST00000396263 THUMPD2Q9BTF0 503 aaKnown RBP20.11■□□□□ 0.81
CCHCR1-202ENST00000396263 ZRANB1Q9UGI0 708 aa20.11■□□□□ 0.81
CCHCR1-202ENST00000396263 NCKAP5LQ9HCH0 1330 aa20.11■□□□□ 0.81
CCHCR1-202ENST00000396263 MBIPQ9NS73 344 aa20.1■□□□□ 0.81
CCHCR1-202ENST00000396263 PRR36Q9H6K5 1346 aa20.1■□□□□ 0.81
CCHCR1-202ENST00000396263 NRKQ7Z2Y5 1582 aa20.1■□□□□ 0.81
CCHCR1-202ENST00000396263 MFAP1P55081 439 aaKnown RBP20.1■□□□□ 0.81
CCHCR1-202ENST00000396263 TSPYL6Q8N831 410 aa20.1■□□□□ 0.81
CCHCR1-202ENST00000396263 CHD1LQ86WJ1 897 aa20.09■□□□□ 0.81
CCHCR1-202ENST00000396263 CFAP44Q96MT7 982 aa20.09■□□□□ 0.81
CCHCR1-202ENST00000396263 ZNF692Q9BU19 519 aaPredicted RBP20.09■□□□□ 0.81
CCHCR1-202ENST00000396263 ABCC4O15439 1325 aa20.09■□□□□ 0.81
CCHCR1-202ENST00000396263 KCNA6P17658 529 aa20.09■□□□□ 0.81
CCHCR1-202ENST00000396263 FAM43AQ8N2R8 423 aa20.09■□□□□ 0.81
CCHCR1-202ENST00000396263 TOPAZ1Q8N9V7 1692 aa20.08■□□□□ 0.81
CCHCR1-202ENST00000396263 NPHP4O75161 1426 aaPredicted RBP20.08■□□□□ 0.8
CCHCR1-202ENST00000396263 GCC1Q96CN9 775 aa20.08■□□□□ 0.8
CCHCR1-202ENST00000396263 RRS1Q15050 365 aaKnown RBP20.06■□□□□ 0.8
CCHCR1-202ENST00000396263 TWISTNBQ3B726 338 aaPredicted RBP20.06■□□□□ 0.8
CCHCR1-202ENST00000396263 LNPKQ9C0E8 428 aa20.06■□□□□ 0.8
CCHCR1-202ENST00000396263 BMP2KLQ5H9B9 411 aa20.04■□□□□ 0.8
CCHCR1-202ENST00000396263 PKNOX2Q96KN3 472 aa20.04■□□□□ 0.8
CCHCR1-202ENST00000396263 NUTM2FA1L443 756 aa20.03■□□□□ 0.8
CCHCR1-202ENST00000396263 RBM25P49756 843 aaKnown RBP20.03■□□□□ 0.8
CCHCR1-202ENST00000396263 RGPD8O14715 1765 aaPredicted RBP20.03■□□□□ 0.8
CCHCR1-202ENST00000396263 KIF24Q5T7B8 1368 aa20.03■□□□□ 0.8
CCHCR1-202ENST00000396263 C8orf58Q8NAV2 365 aa20.03■□□□□ 0.8
CCHCR1-202ENST00000396263 API5Q9BZZ5 524 aaKnown RBP20.02■□□□□ 0.8
CCHCR1-202ENST00000396263 NALCNQ8IZF0 1738 aa20.02■□□□□ 0.79
CCHCR1-202ENST00000396263 KDM4FA0A1W2PPD8 638 aa20.01■□□□□ 0.79
CCHCR1-202ENST00000396263 ELL2O00472 640 aaPredicted RBP20.01■□□□□ 0.79
CCHCR1-202ENST00000396263 OVOS2A0A0J9YW53 1432 aa20■□□□□ 0.79
CCHCR1-202ENST00000396263 OVOS2Q6IE36 1432 aa20■□□□□ 0.79
CCHCR1-202ENST00000396263 ANKRD45Q5TZF3 282 aa20■□□□□ 0.79
CCHCR1-202ENST00000396263 FAM83GA6ND36 823 aa20■□□□□ 0.79
CCHCR1-202ENST00000396263 SIRT2Q8IXJ6 389 aa20■□□□□ 0.79
CCHCR1-202ENST00000396263 C1orf115Q9H7X2 142 aa20■□□□□ 0.79
CCHCR1-202ENST00000396263 CHMP5Q9NZZ3 219 aa19.99■□□□□ 0.79
CCHCR1-202ENST00000396263 TTC21BQ7Z4L5 1316 aa19.99■□□□□ 0.79
CCHCR1-202ENST00000396263 EIF4A2Q14240 407 aaKnown RBP19.98■□□□□ 0.79
CCHCR1-202ENST00000396263 HSCBQ8IWL3 235 aa19.98■□□□□ 0.79
CCHCR1-202ENST00000396263 FMN2Q9NZ56 1722 aa19.98■□□□□ 0.79
CCHCR1-202ENST00000396263 SNX21Q969T3 373 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms