RNA–Protein interactions for RNA: ENST00000396208.3

CCP110-202, Transcript of centriolar coiled-coil protein 110, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCP110, Length 5,151 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-202ENST00000396208 NECTIN2Q92692 538 aa9.11□□□□□ -0.95
CCP110-202ENST00000396208 CDC5LQ99459 802 aaKnown RBP9.11□□□□□ -0.95
CCP110-202ENST00000396208 CCDC87Q9NVE4 849 aa9.11□□□□□ -0.95
CCP110-202ENST00000396208 RCAN3Q9UKA8 241 aa9.11□□□□□ -0.95
CCP110-202ENST00000396208 PLIN1O60240 522 aa9.11□□□□□ -0.95
CCP110-202ENST00000396208 APBA3O96018 575 aa9.11□□□□□ -0.95
CCP110-202ENST00000396208 TCP11L2Q8N4U5 519 aa9.11□□□□□ -0.95
CCP110-202ENST00000396208 FAM196AQ6ZSG2 479 aa9.11□□□□□ -0.95
CCP110-202ENST00000396208 ZSCAN29Q8IWY8 852 aaPredicted RBP9.11□□□□□ -0.95
CCP110-202ENST00000396208 ATP7AQ04656 1500 aa9.11□□□□□ -0.95
CCP110-202ENST00000396208 NACAP1Q9BZK3 213 aa9.11□□□□□ -0.95
CCP110-202ENST00000396208 BTG4Q9NY30 223 aa9.11□□□□□ -0.95
CCP110-202ENST00000396208 KIAA2012Q0VF49 1180 aa9.1□□□□□ -0.95
CCP110-202ENST00000396208 SETDB2Q96T68 719 aa9.1□□□□□ -0.95
CCP110-202ENST00000396208 EYA3Q99504 573 aa9.1□□□□□ -0.95
CCP110-202ENST00000396208 SHANK2Q9UPX8 1470 aa9.1□□□□□ -0.95
CCP110-202ENST00000396208 TMEM2Q9UHN6 1383 aa9.1□□□□□ -0.95
CCP110-202ENST00000396208 PTCD1O75127 700 aaKnown RBP9.1□□□□□ -0.95
CCP110-202ENST00000396208 TRIM29Q14134 588 aa9.1□□□□□ -0.95
CCP110-202ENST00000396208 ANKIB1Q9P2G1 1089 aa9.1□□□□□ -0.95
CCP110-202ENST00000396208 CCDC47Q96A33 483 aaKnown RBP9.1□□□□□ -0.95
CCP110-202ENST00000396208 PUS7Q96PZ0 661 aaKnown RBP9.1□□□□□ -0.95
CCP110-202ENST00000396208 ZKSCAN1P17029 563 aaPredicted RBP9.09□□□□□ -0.95
CCP110-202ENST00000396208 PDE6BP35913 854 aa9.09□□□□□ -0.95
CCP110-202ENST00000396208 ARHGEF6Q15052 776 aa9.09□□□□□ -0.95
CCP110-202ENST00000396208 CHRNA2Q15822 529 aa9.09□□□□□ -0.95
CCP110-202ENST00000396208 MPHOSPH6Q99547 160 aaKnown RBP9.09□□□□□ -0.95
CCP110-202ENST00000396208 NBPF6Q5VWK0 638 aa9.09□□□□□ -0.95
CCP110-202ENST00000396208 LARP1Q6PKG0 1096 aaKnown RBP9.09□□□□□ -0.95
CCP110-202ENST00000396208 NBPF5PQ86XG9 351 aaPredicted RBP9.09□□□□□ -0.95
CCP110-202ENST00000396208 HSCBQ8IWL3 235 aa9.09□□□□□ -0.95
CCP110-202ENST00000396208 NBPF4Q96M43 638 aa9.09□□□□□ -0.95
CCP110-202ENST00000396208 NAIPQ13075 1403 aa9.09□□□□□ -0.95
CCP110-202ENST00000396208 IFIT1P09914 478 aaKnown RBP9.09□□□□□ -0.95
CCP110-202ENST00000396208 ATP6V1AP38606 617 aa9.09□□□□□ -0.95
CCP110-202ENST00000396208 OGFOD1Q8N543 542 aa9.09□□□□□ -0.95
CCP110-202ENST00000396208 MAGI3Q5TCQ9 1506 aa9.09□□□□□ -0.95
CCP110-202ENST00000396208 RGS3P49796 1198 aa9.09□□□□□ -0.95
CCP110-202ENST00000396208 CSPP1Q1MSJ5 1256 aa9.08□□□□□ -0.96
CCP110-202ENST00000396208 CLASRPQ8N2M8 674 aaKnown RBP9.08□□□□□ -0.96
CCP110-202ENST00000396208 ZNF428Q96B54 188 aa9.08□□□□□ -0.96
CCP110-202ENST00000396208 PCDH11XQ9BZA7 1347 aa9.08□□□□□ -0.96
CCP110-202ENST00000396208 PCDH11YQ9BZA8 1340 aa9.08□□□□□ -0.96
CCP110-202ENST00000396208 HIP1O00291 1037 aa9.08□□□□□ -0.96
CCP110-202ENST00000396208 PHF14O94880 888 aa9.08□□□□□ -0.96
CCP110-202ENST00000396208 TRAPPC3LQ5T215 181 aa9.08□□□□□ -0.96
CCP110-202ENST00000396208 LDHCP07864 332 aa9.08□□□□□ -0.96
CCP110-202ENST00000396208 XBP1P17861 261 aa9.08□□□□□ -0.96
CCP110-202ENST00000396208 CCT4P50991 539 aaKnown RBP9.08□□□□□ -0.96
CCP110-202ENST00000396208 TTC39AQ5SRH9 613 aa9.08□□□□□ -0.96
CCP110-202ENST00000396208 RALYLQ86SE5 291 aaKnown RBP9.08□□□□□ -0.96
CCP110-202ENST00000396208 SUPT20HQ8NEM7 779 aa9.08□□□□□ -0.96
CCP110-202ENST00000396208 CEP126Q9P2H0 1117 aa9.08□□□□□ -0.96
CCP110-202ENST00000396208 HOOK2Q96ED9 719 aa9.08□□□□□ -0.96
CCP110-202ENST00000396208 AKAP2Q9Y2D5 859 aa9.08□□□□□ -0.96
CCP110-202ENST00000396208 APAF1O14727 1248 aa9.07□□□□□ -0.96
CCP110-202ENST00000396208 CT47B1P0C2W7 299 aaPredicted RBP9.07□□□□□ -0.96
CCP110-202ENST00000396208 TAF7Q15545 349 aaPredicted RBP9.07□□□□□ -0.96
CCP110-202ENST00000396208 DPY19L2Q6NUT2 758 aa9.07□□□□□ -0.96
CCP110-202ENST00000396208 TPTE2Q6XPS3 522 aa9.07□□□□□ -0.96
CCP110-202ENST00000396208 PIK3R4Q99570 1358 aa9.07□□□□□ -0.96
CCP110-202ENST00000396208 C6orf229H3BNL8 230 aa9.07□□□□□ -0.96
CCP110-202ENST00000396208 SOGA3Q5TF21 947 aa9.07□□□□□ -0.96
CCP110-202ENST00000396208 SRCIN1Q9C0H9 1055 aa9.07□□□□□ -0.96
CCP110-202ENST00000396208 BRD4O60885 1362 aaPredicted RBP9.07□□□□□ -0.96
CCP110-202ENST00000396208 SAMD1Q6SPF0 538 aaPredicted RBP9.07□□□□□ -0.96
CCP110-202ENST00000396208 SIRT1Q96EB6 747 aa9.07□□□□□ -0.96
CCP110-202ENST00000396208 SCAF11Q99590 1463 aaKnown RBP9.07□□□□□ -0.96
CCP110-202ENST00000396208 RRS1Q15050 365 aaKnown RBP9.07□□□□□ -0.96
CCP110-202ENST00000396208 BRMS1Q9HCU9 246 aa9.07□□□□□ -0.96
CCP110-202ENST00000396208 TARBP1Q13395 1621 aaKnown RBP9.07□□□□□ -0.96
CCP110-202ENST00000396208 ADGRF5Q8IZF2 1346 aa9.06□□□□□ -0.96
CCP110-202ENST00000396208 CCNL1Q9UK58 526 aaPredicted RBP9.06□□□□□ -0.96
CCP110-202ENST00000396208 CHD1O14646 1710 aa9.06□□□□□ -0.96
CCP110-202ENST00000396208 DISP1Q96F81 1524 aa9.06□□□□□ -0.96
CCP110-202ENST00000396208 MYL6BP14649 208 aa9.06□□□□□ -0.96
CCP110-202ENST00000396208 PPP4R3BQ5MIZ7 849 aa9.06□□□□□ -0.96
CCP110-202ENST00000396208 HYPKQ9NX55 129 aa9.06□□□□□ -0.96
CCP110-202ENST00000396208 TRMT112Q9UI30 125 aaKnown RBP9.06□□□□□ -0.96
CCP110-202ENST00000396208 ABCA8O94911 1581 aa9.06□□□□□ -0.96
CCP110-202ENST00000396208 EIF6P56537 245 aaKnown RBP9.06□□□□□ -0.96
CCP110-202ENST00000396208 NBPF1Q3BBV0 1214 aa9.06□□□□□ -0.96
CCP110-202ENST00000396208 NLRP3Q96P20 1036 aa9.06□□□□□ -0.96
CCP110-202ENST00000396208 TMEM94Q12767 1356 aa9.06□□□□□ -0.96
CCP110-202ENST00000396208 RBM6P78332 1123 aaKnown RBP9.05□□□□□ -0.96
CCP110-202ENST00000396208 CPLX1O14810 134 aa9.05□□□□□ -0.96
CCP110-202ENST00000396208 SNRPA1P09661 255 aaKnown RBP9.05□□□□□ -0.96
CCP110-202ENST00000396208 SPTY2D1Q68D10 685 aaPredicted RBP9.05□□□□□ -0.96
CCP110-202ENST00000396208 NFXL1Q6ZNB6 911 aa9.05□□□□□ -0.96
CCP110-202ENST00000396208 PPIP5K1Q6PFW1 1433 aa9.05□□□□□ -0.96
CCP110-202ENST00000396208 TCERG1O14776 1098 aaKnown RBP9.05□□□□□ -0.96
CCP110-202ENST00000396208 PPP4R2Q9NY27 417 aa9.05□□□□□ -0.96
CCP110-202ENST00000396208 MIER1Q8N108 512 aa9.05□□□□□ -0.96
CCP110-202ENST00000396208 MPHOSPH10O00566 681 aaKnown RBP9.04□□□□□ -0.96
CCP110-202ENST00000396208 TPM4P67936 248 aa9.04□□□□□ -0.96
CCP110-202ENST00000396208 CRACR2BQ8N4Y2 399 aaPredicted RBP9.04□□□□□ -0.96
CCP110-202ENST00000396208 FYB1O15117 783 aa9.04□□□□□ -0.96
CCP110-202ENST00000396208 PIK3C2GO75747 1445 aa9.04□□□□□ -0.96
CCP110-202ENST00000396208 GCP02774 474 aa9.04□□□□□ -0.96
CCP110-202ENST00000396208 FAM98CQ17RN3 349 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms