RNA–Protein interactions for RNA: ENST00000396182.6

PDE1C-202, Transcript of phosphodiesterase 1C, humanhuman

TSL 1 (best) BASIC

Gene PDE1C, Length 2,420 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-202ENST00000396182 GBP4Q96PP9 640 aa20.06■□□□□ 0.8
PDE1C-202ENST00000396182 POLKQ9UBT6 870 aa20.06■□□□□ 0.8
PDE1C-202ENST00000396182 TRIM44Q96DX7 344 aaPredicted RBP20.05■□□□□ 0.8
PDE1C-202ENST00000396182 PHACTR3Q96KR7 559 aa20.05■□□□□ 0.8
PDE1C-202ENST00000396182 THUMPD2Q9BTF0 503 aaKnown RBP20.05■□□□□ 0.8
PDE1C-202ENST00000396182 VSIG10Q8N0Z9 540 aa20.04■□□□□ 0.8
PDE1C-202ENST00000396182 ARHGEF40Q8TER5 1519 aa20.04■□□□□ 0.8
PDE1C-202ENST00000396182 CLTCQ00610 1675 aaKnown RBP20.04■□□□□ 0.8
PDE1C-202ENST00000396182 HSP90AB1P08238 724 aaKnown RBP20.04■□□□□ 0.8
PDE1C-202ENST00000396182 HMOX1P09601 288 aa20.04■□□□□ 0.8
PDE1C-202ENST00000396182 CHD1LQ86WJ1 897 aa20.04■□□□□ 0.8
PDE1C-202ENST00000396182 LRRC7Q96NW7 1537 aa20.03■□□□□ 0.8
PDE1C-202ENST00000396182 SKOR2Q2VWA4 1001 aaPredicted RBP20.03■□□□□ 0.8
PDE1C-202ENST00000396182 WAPLQ7Z5K2 1190 aa20.02■□□□□ 0.8
PDE1C-202ENST00000396182 FAM135BQ49AJ0 1406 aa20.02■□□□□ 0.79
PDE1C-202ENST00000396182 ZBTB7BO15156 539 aaPredicted RBP20.02■□□□□ 0.79
PDE1C-202ENST00000396182 VAMP4O75379 141 aa20.02■□□□□ 0.79
PDE1C-202ENST00000396182 TSPYL6Q8N831 410 aa20.02■□□□□ 0.79
PDE1C-202ENST00000396182 KIF2CQ99661 725 aa20.02■□□□□ 0.79
PDE1C-202ENST00000396182 PREX1Q8TCU6 1659 aa20.01■□□□□ 0.79
PDE1C-202ENST00000396182 C1orf115Q9H7X2 142 aa20.01■□□□□ 0.79
PDE1C-202ENST00000396182 ALKQ9UM73 1620 aa20.01■□□□□ 0.79
PDE1C-202ENST00000396182 BRPF1P55201 1214 aaPredicted RBP20.01■□□□□ 0.79
PDE1C-202ENST00000396182 PTMSP20962 102 aa20■□□□□ 0.79
PDE1C-202ENST00000396182 MRPL50Q8N5N7 158 aaKnown RBP20■□□□□ 0.79
PDE1C-202ENST00000396182 ZMYND15Q9H091 742 aa20■□□□□ 0.79
PDE1C-202ENST00000396182 ELL2O00472 640 aaPredicted RBP20■□□□□ 0.79
PDE1C-202ENST00000396182 NFE2L2Q16236 605 aa20■□□□□ 0.79
PDE1C-202ENST00000396182 ANKRD45Q5TZF3 282 aa20■□□□□ 0.79
PDE1C-202ENST00000396182 RICTORQ6R327 1708 aa19.99■□□□□ 0.79
PDE1C-202ENST00000396182 PPIP5K1Q6PFW1 1433 aa19.99■□□□□ 0.79
PDE1C-202ENST00000396182 CD2BP2O95400 341 aaKnown RBP19.98■□□□□ 0.79
PDE1C-202ENST00000396182 BMP2KLQ5H9B9 411 aa19.98■□□□□ 0.79
PDE1C-202ENST00000396182 STAG3Q9UJ98 1225 aa19.98■□□□□ 0.79
PDE1C-202ENST00000396182 EMILIN1Q9Y6C2 1016 aa19.98■□□□□ 0.79
PDE1C-202ENST00000396182 TPM2P07951 284 aa19.98■□□□□ 0.79
PDE1C-202ENST00000396182 ZNF428Q96B54 188 aa19.98■□□□□ 0.79
PDE1C-202ENST00000396182 CDC42BPGQ6DT37 1551 aa19.98■□□□□ 0.79
PDE1C-202ENST00000396182 KIF20BQ96Q89 1820 aa19.97■□□□□ 0.79
PDE1C-202ENST00000396182 SIRT2Q8IXJ6 389 aa19.96■□□□□ 0.79
PDE1C-202ENST00000396182 FOXD4L1Q9NU39 408 aa19.96■□□□□ 0.79
PDE1C-202ENST00000396182 K7ELQ4 463 aaPredicted RBP19.95■□□□□ 0.78
PDE1C-202ENST00000396182 CCDC173Q0VFZ6 552 aa19.95■□□□□ 0.78
PDE1C-202ENST00000396182 PPP1R9BQ96SB3 815 aa19.95■□□□□ 0.78
PDE1C-202ENST00000396182 MBIPQ9NS73 344 aa19.95■□□□□ 0.78
PDE1C-202ENST00000396182 ZRANB1Q9UGI0 708 aa19.95■□□□□ 0.78
PDE1C-202ENST00000396182 IL13P35225 146 aa19.95■□□□□ 0.78
PDE1C-202ENST00000396182 ARHGAP45Q92619 1136 aa19.95■□□□□ 0.78
PDE1C-202ENST00000396182 GCC1Q96CN9 775 aa19.94■□□□□ 0.78
PDE1C-202ENST00000396182 ZNF853P0CG23 659 aa19.93■□□□□ 0.78
PDE1C-202ENST00000396182 SSFA2P28290 1259 aa19.93■□□□□ 0.78
PDE1C-202ENST00000396182 GNAI1P63096 354 aa19.93■□□□□ 0.78
PDE1C-202ENST00000396182 NME9Q86XW9 330 aa19.93■□□□□ 0.78
PDE1C-202ENST00000396182 IFT57Q9NWB7 429 aa19.93■□□□□ 0.78
PDE1C-202ENST00000396182 PIK3R4Q99570 1358 aa19.93■□□□□ 0.78
PDE1C-202ENST00000396182 MAP2P11137 1827 aaKnown RBP19.93■□□□□ 0.78
PDE1C-202ENST00000396182 NASPP49321 788 aaPredicted RBP19.93■□□□□ 0.78
PDE1C-202ENST00000396182 IBTKQ9P2D0 1353 aaPredicted RBP19.93■□□□□ 0.78
PDE1C-202ENST00000396182 PTCH1Q13635 1447 aa19.92■□□□□ 0.78
PDE1C-202ENST00000396182 CLEC17AQ6ZS10 378 aa19.92■□□□□ 0.78
PDE1C-202ENST00000396182 CALD1Q05682 793 aaKnown RBP19.92■□□□□ 0.78
PDE1C-202ENST00000396182 C8orf58Q8NAV2 365 aa19.92■□□□□ 0.78
PDE1C-202ENST00000396182 TWISTNBQ3B726 338 aaPredicted RBP19.91■□□□□ 0.78
PDE1C-202ENST00000396182 TBC1D9Q6ZT07 1266 aa19.91■□□□□ 0.78
PDE1C-202ENST00000396182 GAS2L2Q8NHY3 880 aa19.91■□□□□ 0.78
PDE1C-202ENST00000396182 ATP7BP35670 1465 aa19.91■□□□□ 0.78
PDE1C-202ENST00000396182 ZSCAN30Q86W11 494 aa19.91■□□□□ 0.78
PDE1C-202ENST00000396182 RBM42Q9BTD8 480 aaKnown RBP19.91■□□□□ 0.78
PDE1C-202ENST00000396182 ABCC4O15439 1325 aa19.9■□□□□ 0.78
PDE1C-202ENST00000396182 KIAA1211Q6ZU35 1233 aa19.9■□□□□ 0.78
PDE1C-202ENST00000396182 FAM83GA6ND36 823 aa19.9■□□□□ 0.78
PDE1C-202ENST00000396182 KLHL40Q2TBA0 621 aa19.9■□□□□ 0.78
PDE1C-202ENST00000396182 CHMP4BQ9H444 224 aaKnown RBP19.9■□□□□ 0.78
PDE1C-202ENST00000396182 GOLGA6L22H0YM25 854 aa19.89■□□□□ 0.77
PDE1C-202ENST00000396182 NCKAP5LQ9HCH0 1330 aa19.88■□□□□ 0.77
PDE1C-202ENST00000396182 DCTN1Q14203 1278 aa19.88■□□□□ 0.77
PDE1C-202ENST00000396182 RRS1Q15050 365 aaKnown RBP19.88■□□□□ 0.77
PDE1C-202ENST00000396182 CFAP44Q96MT7 982 aa19.88■□□□□ 0.77
PDE1C-202ENST00000396182 BAG4O95429 457 aaKnown RBP19.87■□□□□ 0.77
PDE1C-202ENST00000396182 CPSF1Q10570 1443 aaKnown RBP19.87■□□□□ 0.77
PDE1C-202ENST00000396182 DDX49Q9Y6V7 483 aaKnown RBP19.87■□□□□ 0.77
PDE1C-202ENST00000396182 WASLO00401 505 aaPredicted RBP19.86■□□□□ 0.77
PDE1C-202ENST00000396182 OFD1O75665 1012 aa19.86■□□□□ 0.77
PDE1C-202ENST00000396182 PDCL3Q9H2J4 239 aa19.86■□□□□ 0.77
PDE1C-202ENST00000396182 DLC1Q96QB1 1528 aa19.86■□□□□ 0.77
PDE1C-202ENST00000396182 REREQ9P2R6 1566 aa19.86■□□□□ 0.77
PDE1C-202ENST00000396182 ANP32BQ92688 251 aaKnown RBP19.85■□□□□ 0.77
PDE1C-202ENST00000396182 EDC4Q6P2E9 1401 aaKnown RBP19.85■□□□□ 0.77
PDE1C-202ENST00000396182 A2ML1A8K2U0 1454 aa19.85■□□□□ 0.77
PDE1C-202ENST00000396182 RIMS2Q9UQ26 1411 aa19.84■□□□□ 0.77
PDE1C-202ENST00000396182 API5Q9BZZ5 524 aaKnown RBP19.84■□□□□ 0.77
PDE1C-202ENST00000396182 ZNF445P59923 1031 aa19.83■□□□□ 0.77
PDE1C-202ENST00000396182 CDK12Q9NYV4 1490 aaPredicted RBP19.83■□□□□ 0.76
PDE1C-202ENST00000396182 GSPT1P15170 499 aaKnown RBP19.83■□□□□ 0.76
PDE1C-202ENST00000396182 TXNDC2Q86VQ3 553 aa19.83■□□□□ 0.76
PDE1C-202ENST00000396182 NUDT16Q96DE0 195 aaKnown RBP19.83■□□□□ 0.76
PDE1C-202ENST00000396182 COG3Q96JB2 828 aa19.83■□□□□ 0.76
PDE1C-202ENST00000396182 AATKQ6ZMQ8 1374 aa19.82■□□□□ 0.76
PDE1C-202ENST00000396182 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.82■□□□□ 0.76
PDE1C-202ENST00000396182 CDC45O75419 566 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms