RNA–Protein interactions for RNA: ENST00000395397.7

NR1H3-201, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-201ENST00000395397 ZNF853P0CG23 659 aa17.18■□□□□ 0.34
NR1H3-201ENST00000395397 PRKAR2BP31323 418 aa17.18■□□□□ 0.34
NR1H3-201ENST00000395397 ARHGAP45Q92619 1136 aa17.18■□□□□ 0.34
NR1H3-201ENST00000395397 TSR2Q969E8 191 aaKnown RBP17.18■□□□□ 0.34
NR1H3-201ENST00000395397 SLIT1O75093 1534 aa17.17■□□□□ 0.34
NR1H3-201ENST00000395397 NPM2Q86SE8 214 aaKnown RBP17.17■□□□□ 0.34
NR1H3-201ENST00000395397 SENP3Q9H4L4 574 aaPredicted RBP17.17■□□□□ 0.34
NR1H3-201ENST00000395397 ROBO2Q9HCK4 1378 aa17.17■□□□□ 0.34
NR1H3-201ENST00000395397 TRIM27P14373 513 aa17.16■□□□□ 0.34
NR1H3-201ENST00000395397 RGS3P49796 1198 aa17.16■□□□□ 0.34
NR1H3-201ENST00000395397 LMOD3Q0VAK6 560 aa17.16■□□□□ 0.34
NR1H3-201ENST00000395397 NME9Q86XW9 330 aa17.16■□□□□ 0.34
NR1H3-201ENST00000395397 SMC4Q9NTJ3 1288 aa17.16■□□□□ 0.34
NR1H3-201ENST00000395397 IFT57Q9NWB7 429 aa17.16■□□□□ 0.34
NR1H3-201ENST00000395397 TBX22Q9Y458 520 aa17.16■□□□□ 0.34
NR1H3-201ENST00000395397 PRR36Q9H6K5 1346 aa17.16■□□□□ 0.34
NR1H3-201ENST00000395397 GNAI1P63096 354 aa17.16■□□□□ 0.34
NR1H3-201ENST00000395397 VIRMAQ69YN4 1812 aaKnown RBP17.16■□□□□ 0.34
NR1H3-201ENST00000395397 CHMP4BQ9H444 224 aaKnown RBP17.15■□□□□ 0.34
NR1H3-201ENST00000395397 TNNQ9UQP3 1299 aa17.15■□□□□ 0.34
NR1H3-201ENST00000395397 TOPAZ1Q8N9V7 1692 aa17.14■□□□□ 0.34
NR1H3-201ENST00000395397 ITSN1Q15811 1721 aa17.14■□□□□ 0.33
NR1H3-201ENST00000395397 FTSJ3Q8IY81 847 aaKnown RBP17.14■□□□□ 0.33
NR1H3-201ENST00000395397 BCL2L13Q9BXK5 485 aa17.14■□□□□ 0.33
NR1H3-201ENST00000395397 EMILIN1Q9Y6C2 1016 aa17.14■□□□□ 0.33
NR1H3-201ENST00000395397 SSH2Q76I76 1423 aa17.14■□□□□ 0.33
NR1H3-201ENST00000395397 USP31Q70CQ4 1352 aa17.13■□□□□ 0.33
NR1H3-201ENST00000395397 LTKP29376 864 aa17.13■□□□□ 0.33
NR1H3-201ENST00000395397 PHACTR3Q96KR7 559 aa17.13■□□□□ 0.33
NR1H3-201ENST00000395397 TTC21BQ7Z4L5 1316 aa17.13■□□□□ 0.33
NR1H3-201ENST00000395397 PIK3R4Q99570 1358 aa17.13■□□□□ 0.33
NR1H3-201ENST00000395397 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.12■□□□□ 0.33
NR1H3-201ENST00000395397 VAMP4O75379 141 aa17.12■□□□□ 0.33
NR1H3-201ENST00000395397 ZBTB40Q9NUA8 1239 aa17.12■□□□□ 0.33
NR1H3-201ENST00000395397 NOB1Q9ULX3 412 aaKnown RBP17.12■□□□□ 0.33
NR1H3-201ENST00000395397 PDZRN3Q9UPQ7 1066 aa17.12■□□□□ 0.33
NR1H3-201ENST00000395397 NRKQ7Z2Y5 1582 aa17.12■□□□□ 0.33
NR1H3-201ENST00000395397 SMC5Q8IY18 1101 aa17.11■□□□□ 0.33
NR1H3-201ENST00000395397 EID1Q9Y6B2 187 aa17.11■□□□□ 0.33
NR1H3-201ENST00000395397 USP19O94966 1318 aa17.11■□□□□ 0.33
NR1H3-201ENST00000395397 OVOS2A0A0J9YW53 1432 aa17.11■□□□□ 0.33
NR1H3-201ENST00000395397 PTCH1Q13635 1447 aa17.11■□□□□ 0.33
NR1H3-201ENST00000395397 OVOS2Q6IE36 1432 aa17.11■□□□□ 0.33
NR1H3-201ENST00000395397 CFAP44Q96MT7 982 aa17.11■□□□□ 0.33
NR1H3-201ENST00000395397 RGS17Q9UGC6 210 aaPredicted RBP17.11■□□□□ 0.33
NR1H3-201ENST00000395397 DIP2AQ14689 1571 aa17.1■□□□□ 0.33
NR1H3-201ENST00000395397 TTC21AQ8NDW8 1320 aa17.1■□□□□ 0.33
NR1H3-201ENST00000395397 USP6P35125 1406 aa17.09■□□□□ 0.33
NR1H3-201ENST00000395397 FBLN1P23142 703 aa17.09■□□□□ 0.33
NR1H3-201ENST00000395397 ANKLE2Q86XL3 938 aa17.09■□□□□ 0.33
NR1H3-201ENST00000395397 PTPRUQ92729 1446 aa17.09■□□□□ 0.33
NR1H3-201ENST00000395397 MRPL50Q8N5N7 158 aaKnown RBP17.08■□□□□ 0.32
NR1H3-201ENST00000395397 ZRANB1Q9UGI0 708 aa17.08■□□□□ 0.32
NR1H3-201ENST00000395397 ACEP12821 1306 aa17.08■□□□□ 0.32
NR1H3-201ENST00000395397 KIF24Q5T7B8 1368 aa17.08■□□□□ 0.32
NR1H3-201ENST00000395397 NALCNQ8IZF0 1738 aa17.07■□□□□ 0.32
NR1H3-201ENST00000395397 THEMISQ8N1K5 641 aaPredicted RBP17.07■□□□□ 0.32
NR1H3-201ENST00000395397 HAP1P54257 671 aaPredicted RBP17.06■□□□□ 0.32
NR1H3-201ENST00000395397 TMEM57Q8N5G2 664 aa17.06■□□□□ 0.32
NR1H3-201ENST00000395397 HMOX1P09601 288 aa17.06■□□□□ 0.32
NR1H3-201ENST00000395397 RTL5Q5HYW3 569 aaPredicted RBP17.06■□□□□ 0.32
NR1H3-201ENST00000395397 ITPRIPQ8IWB1 547 aa17.05■□□□□ 0.32
NR1H3-201ENST00000395397 MBIPQ9NS73 344 aa17.04■□□□□ 0.32
NR1H3-201ENST00000395397 DAXXQ9UER7 740 aaPredicted RBP17.04■□□□□ 0.32
NR1H3-201ENST00000395397 AMOTL2Q9Y2J4 779 aa17.04■□□□□ 0.32
NR1H3-201ENST00000395397 NPHP4O75161 1426 aaPredicted RBP17.03■□□□□ 0.32
NR1H3-201ENST00000395397 ZBTB7BO15156 539 aaPredicted RBP17.03■□□□□ 0.32
NR1H3-201ENST00000395397 EIF4A2Q14240 407 aaKnown RBP17.03■□□□□ 0.32
NR1H3-201ENST00000395397 RRS1Q15050 365 aaKnown RBP17.03■□□□□ 0.32
NR1H3-201ENST00000395397 ANKARQ7Z5J8 1434 aa17.03■□□□□ 0.32
NR1H3-201ENST00000395397 RGPD1P0DJD0 1748 aa17.02■□□□□ 0.32
NR1H3-201ENST00000395397 DLG5Q8TDM6 1919 aa17.02■□□□□ 0.32
NR1H3-201ENST00000395397 NBR1Q14596 966 aa17.02■□□□□ 0.32
NR1H3-201ENST00000395397 KIAA0232Q92628 1395 aa17.02■□□□□ 0.31
NR1H3-201ENST00000395397 ABCC4O15439 1325 aa17.02■□□□□ 0.31
NR1H3-201ENST00000395397 CHL1O00533 1208 aa17.01■□□□□ 0.31
NR1H3-201ENST00000395397 API5Q9BZZ5 524 aaKnown RBP17.01■□□□□ 0.31
NR1H3-201ENST00000395397 DEKP35659 375 aaKnown RBP17.01■□□□□ 0.31
NR1H3-201ENST00000395397 NUCB1Q02818 461 aa17.01■□□□□ 0.31
NR1H3-201ENST00000395397 TWISTNBQ3B726 338 aaPredicted RBP17.01■□□□□ 0.31
NR1H3-201ENST00000395397 SEC24BO95487 1268 aa17■□□□□ 0.31
NR1H3-201ENST00000395397 POTEAQ6S8J7 498 aa17■□□□□ 0.31
NR1H3-201ENST00000395397 GCC1Q96CN9 775 aa17■□□□□ 0.31
NR1H3-201ENST00000395397 TBC1D32Q96NH3 1257 aa17■□□□□ 0.31
NR1H3-201ENST00000395397 UPF2Q9HAU5 1272 aaKnown RBP17■□□□□ 0.31
NR1H3-201ENST00000395397 XRN1Q8IZH2 1706 aaKnown RBP16.99■□□□□ 0.31
NR1H3-201ENST00000395397 ARHGEF10O15013 1369 aa16.99■□□□□ 0.31
NR1H3-201ENST00000395397 TSPYL6Q8N831 410 aa16.99■□□□□ 0.31
NR1H3-201ENST00000395397 STRCP1A6NGW2 1772 aa16.98■□□□□ 0.31
NR1H3-201ENST00000395397 BECN1Q14457 450 aa16.98■□□□□ 0.31
NR1H3-201ENST00000395397 SLC26A8Q96RN1 970 aa16.98■□□□□ 0.31
NR1H3-201ENST00000395397 SBNO1A3KN83 1393 aa16.98■□□□□ 0.31
NR1H3-201ENST00000395397 KDRP35968 1356 aa16.98■□□□□ 0.31
NR1H3-201ENST00000395397 THUMPD2Q9BTF0 503 aaKnown RBP16.97■□□□□ 0.31
NR1H3-201ENST00000395397 USP54Q70EL1 1684 aa16.97■□□□□ 0.31
NR1H3-201ENST00000395397 HTATSF1O43719 755 aaKnown RBP16.96■□□□□ 0.31
NR1H3-201ENST00000395397 SULT6B1Q6IMI4 303 aa16.96■□□□□ 0.31
NR1H3-201ENST00000395397 C8orf58Q8NAV2 365 aa16.96■□□□□ 0.31
NR1H3-201ENST00000395397 LAS1LQ9Y4W2 734 aaKnown RBP16.96■□□□□ 0.31
NR1H3-201ENST00000395397 PEAK1Q9H792 1746 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms