RNA–Protein interactions for RNA: ENST00000394853.8

PPP3CA-202, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-202ENST00000394853 PHF23Q9BUL5 403 aaPredicted RBP18.06■□□□□ 0.48
PPP3CA-202ENST00000394853 NPHP4O75161 1426 aaPredicted RBP18.05■□□□□ 0.48
PPP3CA-202ENST00000394853 MYH16Q9H6N6 1097 aa18.05■□□□□ 0.48
PPP3CA-202ENST00000394853 IQSEC2Q5JU85 1478 aa18.05■□□□□ 0.48
PPP3CA-202ENST00000394853 TTC21BQ7Z4L5 1316 aa18.05■□□□□ 0.48
PPP3CA-202ENST00000394853 EVA1CP58658 441 aa18.05■□□□□ 0.48
PPP3CA-202ENST00000394853 COL3A1P02461 1466 aaPredicted RBP18.04■□□□□ 0.48
PPP3CA-202ENST00000394853 RARSP54136 660 aaKnown RBP18.04■□□□□ 0.48
PPP3CA-202ENST00000394853 MED14O60244 1454 aa18.04■□□□□ 0.48
PPP3CA-202ENST00000394853 EXOSC9Q06265 439 aaKnown RBP18.04■□□□□ 0.48
PPP3CA-202ENST00000394853 KRT28Q7Z3Y7 464 aa18.04■□□□□ 0.48
PPP3CA-202ENST00000394853 CCDC27Q2M243 656 aa18.04■□□□□ 0.48
PPP3CA-202ENST00000394853 USP35Q9P2H5 1018 aa18.03■□□□□ 0.48
PPP3CA-202ENST00000394853 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.03■□□□□ 0.48
PPP3CA-202ENST00000394853 PNPLA6Q8IY17 1366 aa18.03■□□□□ 0.48
PPP3CA-202ENST00000394853 FCHSD2O94868 740 aa18.03■□□□□ 0.48
PPP3CA-202ENST00000394853 RSPH6AQ9H0K4 717 aa18.03■□□□□ 0.48
PPP3CA-202ENST00000394853 FANCIQ9NVI1 1328 aa18.02■□□□□ 0.48
PPP3CA-202ENST00000394853 DDX17Q92841 729 aaKnown RBP18.02■□□□□ 0.48
PPP3CA-202ENST00000394853 IL13P35225 146 aa18.01■□□□□ 0.47
PPP3CA-202ENST00000394853 KIF20BQ96Q89 1820 aa18.01■□□□□ 0.47
PPP3CA-202ENST00000394853 MAP2P11137 1827 aaKnown RBP18■□□□□ 0.47
PPP3CA-202ENST00000394853 PNNQ9H307 717 aaKnown RBP18■□□□□ 0.47
PPP3CA-202ENST00000394853 TAOK2Q9UL54 1235 aa18■□□□□ 0.47
PPP3CA-202ENST00000394853 RIMS1Q86UR5 1692 aaKnown RBP18■□□□□ 0.47
PPP3CA-202ENST00000394853 PLEKHG3A1L390 1219 aa17.99■□□□□ 0.47
PPP3CA-202ENST00000394853 HSP90AB2PQ58FF8 381 aa17.99■□□□□ 0.47
PPP3CA-202ENST00000394853 AEBP1Q8IUX7 1158 aa17.99■□□□□ 0.47
PPP3CA-202ENST00000394853 ARHGAP23Q9P227 1491 aa17.99■□□□□ 0.47
PPP3CA-202ENST00000394853 CDC42BPGQ6DT37 1551 aa17.99■□□□□ 0.47
PPP3CA-202ENST00000394853 TOM1O60784 492 aa17.99■□□□□ 0.47
PPP3CA-202ENST00000394853 PAXIP1Q6ZW49 1069 aaPredicted RBP17.99■□□□□ 0.47
PPP3CA-202ENST00000394853 LMTK3Q96Q04 1460 aa17.99■□□□□ 0.47
PPP3CA-202ENST00000394853 SLIT1O75093 1534 aa17.99■□□□□ 0.47
PPP3CA-202ENST00000394853 ELL2O00472 640 aaPredicted RBP17.98■□□□□ 0.47
PPP3CA-202ENST00000394853 RLBP1P12271 317 aa17.98■□□□□ 0.47
PPP3CA-202ENST00000394853 TMEM94Q12767 1356 aa17.98■□□□□ 0.47
PPP3CA-202ENST00000394853 SETD1BQ9UPS6 1966 aaKnown RBP17.98■□□□□ 0.47
PPP3CA-202ENST00000394853 SMC4Q9NTJ3 1288 aa17.98■□□□□ 0.47
PPP3CA-202ENST00000394853 NLRP2Q9NX02 1062 aa17.98■□□□□ 0.47
PPP3CA-202ENST00000394853 ANKRD26Q9UPS8 1709 aa17.98■□□□□ 0.47
PPP3CA-202ENST00000394853 FAM83GA6ND36 823 aa17.97■□□□□ 0.47
PPP3CA-202ENST00000394853 DCTN1Q14203 1278 aa17.97■□□□□ 0.47
PPP3CA-202ENST00000394853 KNDC1Q76NI1 1749 aa17.97■□□□□ 0.47
PPP3CA-202ENST00000394853 DEKP35659 375 aaKnown RBP17.97■□□□□ 0.47
PPP3CA-202ENST00000394853 RGS3P49796 1198 aa17.97■□□□□ 0.47
PPP3CA-202ENST00000394853 STRN4Q9NRL3 753 aa17.97■□□□□ 0.47
PPP3CA-202ENST00000394853 SULT6B1Q6IMI4 303 aa17.97■□□□□ 0.47
PPP3CA-202ENST00000394853 PRDM11Q9NQV5 511 aa17.96■□□□□ 0.47
PPP3CA-202ENST00000394853 SLAIN2Q9P270 581 aa17.96■□□□□ 0.47
PPP3CA-202ENST00000394853 TCERG1O14776 1098 aaKnown RBP17.96■□□□□ 0.46
PPP3CA-202ENST00000394853 CABLES1Q8TDN4 633 aa17.96■□□□□ 0.46
PPP3CA-202ENST00000394853 RTF1Q92541 710 aaKnown RBP17.96■□□□□ 0.46
PPP3CA-202ENST00000394853 EIF4A2Q14240 407 aaKnown RBP17.95■□□□□ 0.46
PPP3CA-202ENST00000394853 USP6P35125 1406 aa17.95■□□□□ 0.46
PPP3CA-202ENST00000394853 NFE2L2Q16236 605 aa17.95■□□□□ 0.46
PPP3CA-202ENST00000394853 MEX3CQ5U5Q3 659 aaKnown RBP17.95■□□□□ 0.46
PPP3CA-202ENST00000394853 MSH5O43196 834 aa17.95■□□□□ 0.46
PPP3CA-202ENST00000394853 ADAMTS2O95450 1211 aa17.95■□□□□ 0.46
PPP3CA-202ENST00000394853 LRRC7Q96NW7 1537 aa17.94■□□□□ 0.46
PPP3CA-202ENST00000394853 PDE3AQ14432 1141 aa17.94■□□□□ 0.46
PPP3CA-202ENST00000394853 SSH1Q8WYL5 1049 aa17.94■□□□□ 0.46
PPP3CA-202ENST00000394853 FTSJ3Q8IY81 847 aaKnown RBP17.93■□□□□ 0.46
PPP3CA-202ENST00000394853 CEP170BQ9Y4F5 1589 aaPredicted RBP17.93■□□□□ 0.46
PPP3CA-202ENST00000394853 KCNA4P22459 653 aa17.93■□□□□ 0.46
PPP3CA-202ENST00000394853 AATKQ6ZMQ8 1374 aa17.92■□□□□ 0.46
PPP3CA-202ENST00000394853 IGHDP01880 384 aa17.92■□□□□ 0.46
PPP3CA-202ENST00000394853 CENPQQ7L2Z9 268 aaPredicted RBP17.92■□□□□ 0.46
PPP3CA-202ENST00000394853 KDM2BQ8NHM5 1336 aa17.91■□□□□ 0.46
PPP3CA-202ENST00000394853 ADGRB2O60241 1585 aa17.91■□□□□ 0.46
PPP3CA-202ENST00000394853 NPHP3Q7Z494 1330 aa17.91■□□□□ 0.46
PPP3CA-202ENST00000394853 PDE4AP27815 886 aa17.91■□□□□ 0.46
PPP3CA-202ENST00000394853 ITSN1Q15811 1721 aa17.9■□□□□ 0.46
PPP3CA-202ENST00000394853 MAP3K19Q56UN5 1328 aa17.9■□□□□ 0.46
PPP3CA-202ENST00000394853 FGD1P98174 961 aa17.9■□□□□ 0.46
PPP3CA-202ENST00000394853 CHRNA2Q15822 529 aa17.9■□□□□ 0.46
PPP3CA-202ENST00000394853 TAF7LQ5H9L4 462 aa17.9■□□□□ 0.46
PPP3CA-202ENST00000394853 ZKSCAN2Q63HK3 967 aa17.9■□□□□ 0.46
PPP3CA-202ENST00000394853 PTCH1Q13635 1447 aa17.89■□□□□ 0.46
PPP3CA-202ENST00000394853 NOB1Q9ULX3 412 aaKnown RBP17.89■□□□□ 0.45
PPP3CA-202ENST00000394853 CDK12Q9NYV4 1490 aaPredicted RBP17.89■□□□□ 0.45
PPP3CA-202ENST00000394853 MON2Q7Z3U7 1717 aa17.89■□□□□ 0.45
PPP3CA-202ENST00000394853 TSPYL6Q8N831 410 aa17.88■□□□□ 0.45
PPP3CA-202ENST00000394853 DIP2AQ14689 1571 aa17.88■□□□□ 0.45
PPP3CA-202ENST00000394853 RGPD8O14715 1765 aaPredicted RBP17.87■□□□□ 0.45
PPP3CA-202ENST00000394853 MCM10Q7L590 875 aa17.87■□□□□ 0.45
PPP3CA-202ENST00000394853 ITPRIPQ8IWB1 547 aa17.87■□□□□ 0.45
PPP3CA-202ENST00000394853 DZIP1LQ8IYY4 767 aaKnown RBP17.87■□□□□ 0.45
PPP3CA-202ENST00000394853 TRIM27P14373 513 aa17.86■□□□□ 0.45
PPP3CA-202ENST00000394853 OVOS2A0A0J9YW53 1432 aa17.86■□□□□ 0.45
PPP3CA-202ENST00000394853 OVOS2Q6IE36 1432 aa17.86■□□□□ 0.45
PPP3CA-202ENST00000394853 AKAP12Q02952 1782 aa17.86■□□□□ 0.45
PPP3CA-202ENST00000394853 KCNH5Q8NCM2 988 aa17.86■□□□□ 0.45
PPP3CA-202ENST00000394853 PCDHB15Q9Y5E8 787 aa17.86■□□□□ 0.45
PPP3CA-202ENST00000394853 MBIPQ9NS73 344 aa17.86■□□□□ 0.45
PPP3CA-202ENST00000394853 IL16Q14005 1332 aa17.86■□□□□ 0.45
PPP3CA-202ENST00000394853 TOM1L2Q6ZVM7 507 aa17.85■□□□□ 0.45
PPP3CA-202ENST00000394853 RAPGEF4Q8WZA2 1011 aa17.85■□□□□ 0.45
PPP3CA-202ENST00000394853 TTC21AQ8NDW8 1320 aa17.85■□□□□ 0.45
PPP3CA-202ENST00000394853 ANP32AP39687 249 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms