RNA–Protein interactions for RNA: ENST00000394829.6

PPP3CB-204, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-204ENST00000394829 ELL2O00472 640 aaPredicted RBP15.72■□□□□ 0.11
PPP3CB-204ENST00000394829 C1orf115Q9H7X2 142 aa15.72■□□□□ 0.11
PPP3CB-204ENST00000394829 VAMP4O75379 141 aa15.71■□□□□ 0.11
PPP3CB-204ENST00000394829 CHD1LQ86WJ1 897 aa15.71■□□□□ 0.11
PPP3CB-204ENST00000394829 NFE2L2Q16236 605 aa15.71■□□□□ 0.11
PPP3CB-204ENST00000394829 VSIG10Q8N0Z9 540 aa15.7■□□□□ 0.1
PPP3CB-204ENST00000394829 ZRANB1Q9UGI0 708 aa15.7■□□□□ 0.1
PPP3CB-204ENST00000394829 ZBTB7BO15156 539 aaPredicted RBP15.7■□□□□ 0.1
PPP3CB-204ENST00000394829 MRPL50Q8N5N7 158 aaKnown RBP15.7■□□□□ 0.1
PPP3CB-204ENST00000394829 PPIP5K1Q6PFW1 1433 aa15.69■□□□□ 0.1
PPP3CB-204ENST00000394829 MCM4P33991 863 aa15.69■□□□□ 0.1
PPP3CB-204ENST00000394829 BRPF1P55201 1214 aaPredicted RBP15.69■□□□□ 0.1
PPP3CB-204ENST00000394829 ATP7BP35670 1465 aa15.69■□□□□ 0.1
PPP3CB-204ENST00000394829 NME9Q86XW9 330 aa15.69■□□□□ 0.1
PPP3CB-204ENST00000394829 ZMYND15Q9H091 742 aa15.69■□□□□ 0.1
PPP3CB-204ENST00000394829 RIMS1Q86UR5 1692 aaKnown RBP15.68■□□□□ 0.1
PPP3CB-204ENST00000394829 CHMP5Q9NZZ3 219 aa15.68■□□□□ 0.1
PPP3CB-204ENST00000394829 IL13P35225 146 aa15.68■□□□□ 0.1
PPP3CB-204ENST00000394829 ANKRD45Q5TZF3 282 aa15.68■□□□□ 0.1
PPP3CB-204ENST00000394829 DLG5Q8TDM6 1919 aa15.68■□□□□ 0.1
PPP3CB-204ENST00000394829 ZNF428Q96B54 188 aa15.68■□□□□ 0.1
PPP3CB-204ENST00000394829 ARXQ96QS3 562 aa15.68■□□□□ 0.1
PPP3CB-204ENST00000394829 MBIPQ9NS73 344 aa15.68■□□□□ 0.1
PPP3CB-204ENST00000394829 HSCBQ8IWL3 235 aa15.67■□□□□ 0.1
PPP3CB-204ENST00000394829 TMEM2Q9UHN6 1383 aa15.67■□□□□ 0.1
PPP3CB-204ENST00000394829 NCKAP5LQ9HCH0 1330 aa15.66■□□□□ 0.1
PPP3CB-204ENST00000394829 DLC1Q96QB1 1528 aa15.66■□□□□ 0.1
PPP3CB-204ENST00000394829 RBM25P49756 843 aaKnown RBP15.66■□□□□ 0.1
PPP3CB-204ENST00000394829 GNAI1P63096 354 aa15.66■□□□□ 0.1
PPP3CB-204ENST00000394829 GZF1Q9H116 711 aaPredicted RBP15.66■□□□□ 0.1
PPP3CB-204ENST00000394829 ADAMTSL3P82987 1691 aa15.66■□□□□ 0.1
PPP3CB-204ENST00000394829 PTCH1Q13635 1447 aa15.66■□□□□ 0.1
PPP3CB-204ENST00000394829 SIRT2Q8IXJ6 389 aa15.66■□□□□ 0.1
PPP3CB-204ENST00000394829 IFT57Q9NWB7 429 aa15.66■□□□□ 0.1
PPP3CB-204ENST00000394829 FAM83GA6ND36 823 aa15.65■□□□□ 0.1
PPP3CB-204ENST00000394829 ZNF853P0CG23 659 aa15.65■□□□□ 0.1
PPP3CB-204ENST00000394829 RRS1Q15050 365 aaKnown RBP15.65■□□□□ 0.1
PPP3CB-204ENST00000394829 ZNF692Q9BU19 519 aaPredicted RBP15.65■□□□□ 0.1
PPP3CB-204ENST00000394829 BMP2KLQ5H9B9 411 aa15.65■□□□□ 0.1
PPP3CB-204ENST00000394829 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.65■□□□□ 0.1
PPP3CB-204ENST00000394829 ARHGAP45Q92619 1136 aa15.65■□□□□ 0.1
PPP3CB-204ENST00000394829 CPSF1Q10570 1443 aaKnown RBP15.65■□□□□ 0.1
PPP3CB-204ENST00000394829 PIK3R4Q99570 1358 aa15.64■□□□□ 0.09
PPP3CB-204ENST00000394829 C8orf58Q8NAV2 365 aa15.64■□□□□ 0.09
PPP3CB-204ENST00000394829 KNDC1Q76NI1 1749 aa15.64■□□□□ 0.09
PPP3CB-204ENST00000394829 WASLO00401 505 aaPredicted RBP15.64■□□□□ 0.09
PPP3CB-204ENST00000394829 CALD1Q05682 793 aaKnown RBP15.64■□□□□ 0.09
PPP3CB-204ENST00000394829 TWISTNBQ3B726 338 aaPredicted RBP15.64■□□□□ 0.09
PPP3CB-204ENST00000394829 GCC1Q96CN9 775 aa15.64■□□□□ 0.09
PPP3CB-204ENST00000394829 EDC4Q6P2E9 1401 aaKnown RBP15.64■□□□□ 0.09
PPP3CB-204ENST00000394829 DCTN1Q14203 1278 aa15.63■□□□□ 0.09
PPP3CB-204ENST00000394829 L1TD1Q5T7N2 865 aaKnown RBP15.63■□□□□ 0.09
PPP3CB-204ENST00000394829 ABCC4O15439 1325 aa15.63■□□□□ 0.09
PPP3CB-204ENST00000394829 METP08581 1390 aa15.63■□□□□ 0.09
PPP3CB-204ENST00000394829 SLIT1O75093 1534 aa15.63■□□□□ 0.09
PPP3CB-204ENST00000394829 TXNDC2Q86VQ3 553 aa15.63■□□□□ 0.09
PPP3CB-204ENST00000394829 PLPPR3Q6T4P5 718 aa15.62■□□□□ 0.09
PPP3CB-204ENST00000394829 FAM43AQ8N2R8 423 aa15.62■□□□□ 0.09
PPP3CB-204ENST00000394829 NCOA3Q9Y6Q9 1424 aa15.62■□□□□ 0.09
PPP3CB-204ENST00000394829 CDK12Q9NYV4 1490 aaPredicted RBP15.62■□□□□ 0.09
PPP3CB-204ENST00000394829 TRAK2O60296 914 aa15.62■□□□□ 0.09
PPP3CB-204ENST00000394829 CFAP44Q96MT7 982 aa15.62■□□□□ 0.09
PPP3CB-204ENST00000394829 KIF2CQ99661 725 aa15.62■□□□□ 0.09
PPP3CB-204ENST00000394829 ARHGAP23Q9P227 1491 aa15.62■□□□□ 0.09
PPP3CB-204ENST00000394829 CPS1P31327 1500 aa15.62■□□□□ 0.09
PPP3CB-204ENST00000394829 DDIT3P35638 169 aa15.61■□□□□ 0.09
PPP3CB-204ENST00000394829 SNX21Q969T3 373 aa15.61■□□□□ 0.09
PPP3CB-204ENST00000394829 NUDT16Q96DE0 195 aaKnown RBP15.61■□□□□ 0.09
PPP3CB-204ENST00000394829 XRCC6P12956 609 aaKnown RBP eCLIP15.61■□□□□ 0.09
PPP3CB-204ENST00000394829 ADAMTS13Q76LX8 1427 aa15.6■□□□□ 0.09
PPP3CB-204ENST00000394829 LTKP29376 864 aa15.6■□□□□ 0.09
PPP3CB-204ENST00000394829 TBC1D9Q6ZT07 1266 aa15.6■□□□□ 0.09
PPP3CB-204ENST00000394829 COG3Q96JB2 828 aa15.6■□□□□ 0.09
PPP3CB-204ENST00000394829 CHMP4BQ9H444 224 aaKnown RBP15.6■□□□□ 0.09
PPP3CB-204ENST00000394829 GOLGA6L3A6NEY3 463 aa15.6■□□□□ 0.09
PPP3CB-204ENST00000394829 CD2BP2O95400 341 aaKnown RBP15.6■□□□□ 0.09
PPP3CB-204ENST00000394829 PODXL2Q9NZ53 605 aa15.6■□□□□ 0.09
PPP3CB-204ENST00000394829 AATKQ6ZMQ8 1374 aa15.59■□□□□ 0.09
PPP3CB-204ENST00000394829 FSD2A1L4K1 749 aa15.59■□□□□ 0.09
PPP3CB-204ENST00000394829 PLEKHG1Q9ULL1 1385 aa15.58■□□□□ 0.09
PPP3CB-204ENST00000394829 CEP170BQ9Y4F5 1589 aaPredicted RBP15.58■□□□□ 0.09
PPP3CB-204ENST00000394829 MON2Q7Z3U7 1717 aa15.58■□□□□ 0.08
PPP3CB-204ENST00000394829 HSP90AB1P08238 724 aaKnown RBP15.58■□□□□ 0.08
PPP3CB-204ENST00000394829 RBM42Q9BTD8 480 aaKnown RBP15.58■□□□□ 0.08
PPP3CB-204ENST00000394829 PANK2Q9BZ23 570 aa15.58■□□□□ 0.08
PPP3CB-204ENST00000394829 HDGFP51858 240 aaKnown RBP15.57■□□□□ 0.08
PPP3CB-204ENST00000394829 LMOD3Q0VAK6 560 aa15.57■□□□□ 0.08
PPP3CB-204ENST00000394829 CCDC61Q9Y6R9 512 aa15.57■□□□□ 0.08
PPP3CB-204ENST00000394829 AEBP1Q8IUX7 1158 aa15.57■□□□□ 0.08
PPP3CB-204ENST00000394829 TNPO1Q92973 898 aaKnown RBP15.57■□□□□ 0.08
PPP3CB-204ENST00000394829 FOXD4L1Q9NU39 408 aa15.57■□□□□ 0.08
PPP3CB-204ENST00000394829 ZNF142P52746 1687 aaPredicted RBP15.57■□□□□ 0.08
PPP3CB-204ENST00000394829 TECPR2O15040 1411 aa15.57■□□□□ 0.08
PPP3CB-204ENST00000394829 KRT24Q2M2I5 525 aa15.57■□□□□ 0.08
PPP3CB-204ENST00000394829 API5Q9BZZ5 524 aaKnown RBP15.57■□□□□ 0.08
PPP3CB-204ENST00000394829 RRAGDQ9NQL2 400 aaPredicted RBP15.56■□□□□ 0.08
PPP3CB-204ENST00000394829 DDX11L8A8MPP1 907 aa15.55■□□□□ 0.08
PPP3CB-204ENST00000394829 GSPT1P15170 499 aaKnown RBP15.55■□□□□ 0.08
PPP3CB-204ENST00000394829 AKAP12Q02952 1782 aa15.55■□□□□ 0.08
PPP3CB-204ENST00000394829 PRR36Q9H6K5 1346 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms