RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 PLEKHH2Q8IVE3 1493 aa8.76□□□□□ -1.01
SYNE2-205ENST00000394768 CCDC192P0DO97 292 aa8.75□□□□□ -1.01
SYNE2-205ENST00000394768 SREK1Q8WXA9 508 aaKnown RBP8.75□□□□□ -1.01
SYNE2-205ENST00000394768 SSX2IPQ9Y2D8 614 aa8.75□□□□□ -1.01
SYNE2-205ENST00000394768 RRP7AQ9Y3A4 280 aaKnown RBP8.75□□□□□ -1.01
SYNE2-205ENST00000394768 KRT32Q14532 448 aa8.75□□□□□ -1.01
SYNE2-205ENST00000394768 SPATA24Q86W54 205 aa8.75□□□□□ -1.01
SYNE2-205ENST00000394768 STK11IPQ8N1F8 1099 aa8.75□□□□□ -1.01
SYNE2-205ENST00000394768 L3MBTL2Q969R5 705 aa8.75□□□□□ -1.01
SYNE2-205ENST00000394768 CNTLNQ9NXG0 1405 aa8.75□□□□□ -1.01
SYNE2-205ENST00000394768 ELL2O00472 640 aaPredicted RBP8.75□□□□□ -1.01
SYNE2-205ENST00000394768 CETN1Q12798 172 aa8.75□□□□□ -1.01
SYNE2-205ENST00000394768 PHAXQ9H814 394 aaKnown RBP8.75□□□□□ -1.01
SYNE2-205ENST00000394768 SERPINC1P01008 464 aa8.74□□□□□ -1.01
SYNE2-205ENST00000394768 CCT4P50991 539 aaKnown RBP8.74□□□□□ -1.01
SYNE2-205ENST00000394768 JPH4Q96JJ6 628 aa8.74□□□□□ -1.01
SYNE2-205ENST00000394768 NASPP49321 788 aaPredicted RBP8.74□□□□□ -1.01
SYNE2-205ENST00000394768 CEP57L1Q8IYX8 460 aa8.74□□□□□ -1.01
SYNE2-205ENST00000394768 TAF4BQ92750 862 aa8.74□□□□□ -1.01
SYNE2-205ENST00000394768 UBAC1Q9BSL1 405 aa8.74□□□□□ -1.01
SYNE2-205ENST00000394768 TAOK3Q9H2K8 898 aa8.74□□□□□ -1.01
SYNE2-205ENST00000394768 ARHGAP5Q13017 1502 aa8.74□□□□□ -1.01
SYNE2-205ENST00000394768 PLIN1O60240 522 aa8.74□□□□□ -1.01
SYNE2-205ENST00000394768 TTC21AQ8NDW8 1320 aa8.74□□□□□ -1.01
SYNE2-205ENST00000394768 PIBF1Q8WXW3 757 aa8.74□□□□□ -1.01
SYNE2-205ENST00000394768 GCOM1H8Y6P7 765 aaPredicted RBP8.74□□□□□ -1.01
SYNE2-205ENST00000394768 MYZAPP0CAP1 466 aa8.74□□□□□ -1.01
SYNE2-205ENST00000394768 SCLT1Q96NL6 688 aa8.74□□□□□ -1.01
SYNE2-205ENST00000394768 KIF4AO95239 1232 aa8.74□□□□□ -1.01
SYNE2-205ENST00000394768 HOOK3Q86VS8 718 aa8.74□□□□□ -1.01
SYNE2-205ENST00000394768 GBP3Q9H0R5 595 aa8.74□□□□□ -1.01
SYNE2-205ENST00000394768 MAP9Q49MG5 647 aa8.73□□□□□ -1.01
SYNE2-205ENST00000394768 ABTB2Q8N961 1025 aa8.73□□□□□ -1.01
SYNE2-205ENST00000394768 CFAP57Q96MR6 1250 aa8.73□□□□□ -1.01
SYNE2-205ENST00000394768 DAPK1P53355 1430 aa8.73□□□□□ -1.01
SYNE2-205ENST00000394768 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.73□□□□□ -1.01
SYNE2-205ENST00000394768 ST20-MTHFSA0A0A6YYL1 179 aa8.73□□□□□ -1.01
SYNE2-205ENST00000394768 DNAJC2Q99543 621 aaKnown RBP8.73□□□□□ -1.01
SYNE2-205ENST00000394768 CCDC196A0A1B0GTZ2 297 aa8.73□□□□□ -1.01
SYNE2-205ENST00000394768 FERP16591 822 aa8.73□□□□□ -1.01
SYNE2-205ENST00000394768 AIMP1Q12904 312 aaKnown RBP8.73□□□□□ -1.01
SYNE2-205ENST00000394768 KIF2AO00139 706 aaPredicted RBP8.73□□□□□ -1.01
SYNE2-205ENST00000394768 GNAI2P04899 355 aa8.73□□□□□ -1.01
SYNE2-205ENST00000394768 LRRCC1Q9C099 1032 aa8.73□□□□□ -1.01
SYNE2-205ENST00000394768 IGHMBP2P38935 993 aaKnown RBP8.73□□□□□ -1.01
SYNE2-205ENST00000394768 ATF7IPQ6VMQ6 1270 aa8.73□□□□□ -1.01
SYNE2-205ENST00000394768 THEMISQ8N1K5 641 aaPredicted RBP8.73□□□□□ -1.01
SYNE2-205ENST00000394768 SMTNL1A8MU46 457 aa8.72□□□□□ -1.01
SYNE2-205ENST00000394768 MRE11P49959 708 aa8.72□□□□□ -1.01
SYNE2-205ENST00000394768 CYP46A1Q9Y6A2 500 aa8.72□□□□□ -1.01
SYNE2-205ENST00000394768 TDRD9Q8NDG6 1382 aaKnown RBP8.72□□□□□ -1.01
SYNE2-205ENST00000394768 SLC4A3P48751 1232 aa8.72□□□□□ -1.01
SYNE2-205ENST00000394768 ZSCAN29Q8IWY8 852 aaPredicted RBP8.72□□□□□ -1.01
SYNE2-205ENST00000394768 PDE4AP27815 886 aa8.72□□□□□ -1.01
SYNE2-205ENST00000394768 TAX1BP1Q86VP1 789 aa8.72□□□□□ -1.01
SYNE2-205ENST00000394768 GCC1Q96CN9 775 aa8.72□□□□□ -1.01
SYNE2-205ENST00000394768 C22orf23Q9BZE7 217 aa8.72□□□□□ -1.01
SYNE2-205ENST00000394768 PPP4R3BQ5MIZ7 849 aa8.72□□□□□ -1.01
SYNE2-205ENST00000394768 STXBP4Q6ZWJ1 553 aa8.72□□□□□ -1.01
SYNE2-205ENST00000394768 CUL5Q93034 780 aa8.72□□□□□ -1.01
SYNE2-205ENST00000394768 TTLL5Q6EMB2 1281 aa8.72□□□□□ -1.01
SYNE2-205ENST00000394768 TSG101Q99816 390 aa8.72□□□□□ -1.01
SYNE2-205ENST00000394768 ZHX3Q9H4I2 956 aa8.72□□□□□ -1.01
SYNE2-205ENST00000394768 DDX23Q9BUQ8 820 aaKnown RBP8.72□□□□□ -1.01
SYNE2-205ENST00000394768 NLRP6P59044 892 aa8.72□□□□□ -1.01
SYNE2-205ENST00000394768 CCDC148Q8NFR7 591 aa8.72□□□□□ -1.01
SYNE2-205ENST00000394768 CADPSQ9ULU8 1353 aa8.72□□□□□ -1.01
SYNE2-205ENST00000394768 TSPY26PQ9H489 355 aa8.72□□□□□ -1.01
SYNE2-205ENST00000394768 ZNF692Q9BU19 519 aaPredicted RBP8.71□□□□□ -1.01
SYNE2-205ENST00000394768 FERMT2Q96AC1 680 aa8.71□□□□□ -1.01
SYNE2-205ENST00000394768 CCDC88BA6NC98 1476 aa8.71□□□□□ -1.01
SYNE2-205ENST00000394768 CABP4P57796 275 aa8.71□□□□□ -1.01
SYNE2-205ENST00000394768 PYM1Q9BRP8 204 aaKnown RBP8.71□□□□□ -1.01
SYNE2-205ENST00000394768 KIF21BO75037 1637 aa8.71□□□□□ -1.01
SYNE2-205ENST00000394768 BRPF1P55201 1214 aaPredicted RBP8.71□□□□□ -1.01
SYNE2-205ENST00000394768 TSNARE1Q96NA8 513 aa8.71□□□□□ -1.01
SYNE2-205ENST00000394768 BCL2L13Q9BXK5 485 aa8.71□□□□□ -1.01
SYNE2-205ENST00000394768 KRT85P78386 507 aa8.71□□□□□ -1.02
SYNE2-205ENST00000394768 MTMR7Q9Y216 660 aa8.71□□□□□ -1.02
SYNE2-205ENST00000394768 WDR33Q9C0J8 1336 aaKnown RBP8.71□□□□□ -1.02
SYNE2-205ENST00000394768 STARD3NLO95772 234 aa8.71□□□□□ -1.02
SYNE2-205ENST00000394768 TRAF1Q13077 416 aa8.71□□□□□ -1.02
SYNE2-205ENST00000394768 USP37Q86T82 979 aa8.71□□□□□ -1.02
SYNE2-205ENST00000394768 FHOD3Q2V2M9 1422 aa8.71□□□□□ -1.02
SYNE2-205ENST00000394768 COG6Q9Y2V7 657 aa8.71□□□□□ -1.02
SYNE2-205ENST00000394768 COMMD10Q9Y6G5 202 aa8.71□□□□□ -1.02
SYNE2-205ENST00000394768 NECTIN2Q92692 538 aa8.71□□□□□ -1.02
SYNE2-205ENST00000394768 CEP63Q96MT8 703 aa8.71□□□□□ -1.02
SYNE2-205ENST00000394768 TMEM266Q2M3C6 531 aa8.7□□□□□ -1.02
SYNE2-205ENST00000394768 AKAP2Q9Y2D5 859 aa8.7□□□□□ -1.02
SYNE2-205ENST00000394768 TAF3Q5VWG9 929 aa8.7□□□□□ -1.02
SYNE2-205ENST00000394768 RBM42Q9BTD8 480 aaKnown RBP8.7□□□□□ -1.02
SYNE2-205ENST00000394768 TDO2P48775 406 aa8.7□□□□□ -1.02
SYNE2-205ENST00000394768 CCDC12Q8WUD4 166 aaPredicted RBP8.7□□□□□ -1.02
SYNE2-205ENST00000394768 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.7□□□□□ -1.02
SYNE2-205ENST00000394768 V9GYY5 206 aaPredicted RBP8.7□□□□□ -1.02
SYNE2-205ENST00000394768 SLU7O95391 586 aaKnown RBP8.7□□□□□ -1.02
SYNE2-205ENST00000394768 ME1P48163 572 aa8.7□□□□□ -1.02
SYNE2-205ENST00000394768 FKBP15Q5T1M5 1219 aa8.7□□□□□ -1.02
SYNE2-205ENST00000394768 IL27Q8NEV9 243 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms