RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 ATF7IPQ6VMQ6 1270 aa12.47□□□□□ -0.41
PSEN1-204ENST00000394164 GAS2L3Q86XJ1 694 aa12.47□□□□□ -0.41
PSEN1-204ENST00000394164 ZMYM3Q14202 1370 aa12.47□□□□□ -0.41
PSEN1-204ENST00000394164 PPIP5K1Q6PFW1 1433 aa12.47□□□□□ -0.41
PSEN1-204ENST00000394164 A2ML1A8K2U0 1454 aa12.47□□□□□ -0.41
PSEN1-204ENST00000394164 COG3Q96JB2 828 aa12.47□□□□□ -0.41
PSEN1-204ENST00000394164 FOXD4L1Q9NU39 408 aa12.47□□□□□ -0.41
PSEN1-204ENST00000394164 PRDM10Q9NQV6 1147 aa12.46□□□□□ -0.41
PSEN1-204ENST00000394164 AEBP1Q8IUX7 1158 aa12.46□□□□□ -0.41
PSEN1-204ENST00000394164 ARHGEF40Q8TER5 1519 aa12.46□□□□□ -0.42
PSEN1-204ENST00000394164 ZBTB7CA1YPR0 619 aa12.46□□□□□ -0.42
PSEN1-204ENST00000394164 TBC1D32Q96NH3 1257 aa12.46□□□□□ -0.42
PSEN1-204ENST00000394164 FCHSD2O94868 740 aa12.45□□□□□ -0.42
PSEN1-204ENST00000394164 TPM2P07951 284 aa12.45□□□□□ -0.42
PSEN1-204ENST00000394164 KRT24Q2M2I5 525 aa12.45□□□□□ -0.42
PSEN1-204ENST00000394164 NINLQ9Y2I6 1382 aa12.44□□□□□ -0.42
PSEN1-204ENST00000394164 DIP2BQ9P265 1576 aa12.44□□□□□ -0.42
PSEN1-204ENST00000394164 NUTM2GQ5VZR2 741 aa12.44□□□□□ -0.42
PSEN1-204ENST00000394164 CCDC61Q9Y6R9 512 aa12.44□□□□□ -0.42
PSEN1-204ENST00000394164 NLRP1Q9C000 1473 aa12.44□□□□□ -0.42
PSEN1-204ENST00000394164 LNPKQ9C0E8 428 aa12.44□□□□□ -0.42
PSEN1-204ENST00000394164 CHMP5Q9NZZ3 219 aa12.44□□□□□ -0.42
PSEN1-204ENST00000394164 PRDM4Q9UKN5 801 aa12.44□□□□□ -0.42
PSEN1-204ENST00000394164 LTKP29376 864 aa12.43□□□□□ -0.42
PSEN1-204ENST00000394164 RBM33Q96EV2 1170 aaKnown RBP12.43□□□□□ -0.42
PSEN1-204ENST00000394164 PRR36Q9H6K5 1346 aa12.43□□□□□ -0.42
PSEN1-204ENST00000394164 ZHX1Q9UKY1 873 aaPredicted RBP12.43□□□□□ -0.42
PSEN1-204ENST00000394164 R3HCC1Q9Y3T6 440 aaKnown RBP12.43□□□□□ -0.42
PSEN1-204ENST00000394164 COL3A1P02461 1466 aaPredicted RBP12.43□□□□□ -0.42
PSEN1-204ENST00000394164 NFE2L2Q16236 605 aa12.43□□□□□ -0.42
PSEN1-204ENST00000394164 SULT6B1Q6IMI4 303 aa12.43□□□□□ -0.42
PSEN1-204ENST00000394164 MIS18AQ9NYP9 233 aa12.43□□□□□ -0.42
PSEN1-204ENST00000394164 USP32Q8NFA0 1604 aa12.42□□□□□ -0.42
PSEN1-204ENST00000394164 MBIPQ9NS73 344 aa12.42□□□□□ -0.42
PSEN1-204ENST00000394164 DDX19BQ9UMR2 479 aa12.42□□□□□ -0.42
PSEN1-204ENST00000394164 IL13P35225 146 aa12.42□□□□□ -0.42
PSEN1-204ENST00000394164 MCM10Q7L590 875 aa12.42□□□□□ -0.42
PSEN1-204ENST00000394164 C8orf58Q8NAV2 365 aa12.41□□□□□ -0.42
PSEN1-204ENST00000394164 HSP90AB2PQ58FF8 381 aa12.41□□□□□ -0.42
PSEN1-204ENST00000394164 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.41□□□□□ -0.42
PSEN1-204ENST00000394164 APBB1O00213 710 aa12.4□□□□□ -0.42
PSEN1-204ENST00000394164 CALD1Q05682 793 aaKnown RBP12.4□□□□□ -0.42
PSEN1-204ENST00000394164 ROBO2Q9HCK4 1378 aa12.4□□□□□ -0.42
PSEN1-204ENST00000394164 LRRC7Q96NW7 1537 aa12.4□□□□□ -0.42
PSEN1-204ENST00000394164 IPO8O15397 1037 aaKnown RBP12.4□□□□□ -0.43
PSEN1-204ENST00000394164 C22orf23Q9BZE7 217 aa12.4□□□□□ -0.43
PSEN1-204ENST00000394164 ACEP12821 1306 aa12.39□□□□□ -0.43
PSEN1-204ENST00000394164 VAMP4O75379 141 aa12.39□□□□□ -0.43
PSEN1-204ENST00000394164 TWISTNBQ3B726 338 aaPredicted RBP12.39□□□□□ -0.43
PSEN1-204ENST00000394164 MAP2P11137 1827 aaKnown RBP12.39□□□□□ -0.43
PSEN1-204ENST00000394164 PNPLA6Q8IY17 1366 aa12.39□□□□□ -0.43
PSEN1-204ENST00000394164 C14orf37Q86TY3 774 aa12.39□□□□□ -0.43
PSEN1-204ENST00000394164 TNRQ92752 1358 aa12.39□□□□□ -0.43
PSEN1-204ENST00000394164 MSNP26038 577 aaKnown RBP12.38□□□□□ -0.43
PSEN1-204ENST00000394164 ANKRD45Q5TZF3 282 aa12.38□□□□□ -0.43
PSEN1-204ENST00000394164 HSCBQ8IWL3 235 aa12.38□□□□□ -0.43
PSEN1-204ENST00000394164 CPS1P31327 1500 aa12.38□□□□□ -0.43
PSEN1-204ENST00000394164 DDX11L8A8MPP1 907 aa12.38□□□□□ -0.43
PSEN1-204ENST00000394164 FOXO3O43524 673 aa12.38□□□□□ -0.43
PSEN1-204ENST00000394164 AAMPQ13685 434 aa12.38□□□□□ -0.43
PSEN1-204ENST00000394164 ZBTB40Q9NUA8 1239 aa12.38□□□□□ -0.43
PSEN1-204ENST00000394164 HDGFP51858 240 aaKnown RBP12.37□□□□□ -0.43
PSEN1-204ENST00000394164 LTV1Q96GA3 475 aaPredicted RBP12.37□□□□□ -0.43
PSEN1-204ENST00000394164 KIF16BQ96L93 1317 aa12.37□□□□□ -0.43
PSEN1-204ENST00000394164 ADGRB2O60241 1585 aa12.37□□□□□ -0.43
PSEN1-204ENST00000394164 EIF4A2Q14240 407 aaKnown RBP12.37□□□□□ -0.43
PSEN1-204ENST00000394164 TNPO1Q92973 898 aaKnown RBP12.37□□□□□ -0.43
PSEN1-204ENST00000394164 PPP6R1Q9UPN7 881 aa12.37□□□□□ -0.43
PSEN1-204ENST00000394164 GNAI1P63096 354 aa12.36□□□□□ -0.43
PSEN1-204ENST00000394164 XPCQ01831 940 aaPredicted RBP12.36□□□□□ -0.43
PSEN1-204ENST00000394164 NGDNQ8NEJ9 315 aaKnown RBP12.36□□□□□ -0.43
PSEN1-204ENST00000394164 IL16Q14005 1332 aa12.36□□□□□ -0.43
PSEN1-204ENST00000394164 CT47B1P0C2W7 299 aaPredicted RBP12.36□□□□□ -0.43
PSEN1-204ENST00000394164 NECTIN2Q92692 538 aa12.36□□□□□ -0.43
PSEN1-204ENST00000394164 AMOTL2Q9Y2J4 779 aa12.36□□□□□ -0.43
PSEN1-204ENST00000394164 FAM135BQ49AJ0 1406 aa12.35□□□□□ -0.43
PSEN1-204ENST00000394164 NASPP49321 788 aaPredicted RBP12.35□□□□□ -0.43
PSEN1-204ENST00000394164 MRPL50Q8N5N7 158 aaKnown RBP12.35□□□□□ -0.43
PSEN1-204ENST00000394164 EDC4Q6P2E9 1401 aaKnown RBP12.35□□□□□ -0.43
PSEN1-204ENST00000394164 TTC21BQ7Z4L5 1316 aa12.35□□□□□ -0.43
PSEN1-204ENST00000394164 VIRMAQ69YN4 1812 aaKnown RBP12.35□□□□□ -0.43
PSEN1-204ENST00000394164 NCLP19338 710 aaKnown RBP12.35□□□□□ -0.43
PSEN1-204ENST00000394164 TRHP20396 242 aaPredicted RBP12.35□□□□□ -0.43
PSEN1-204ENST00000394164 TMEM2Q9UHN6 1383 aa12.34□□□□□ -0.43
PSEN1-204ENST00000394164 ZSCAN30Q86W11 494 aa12.34□□□□□ -0.43
PSEN1-204ENST00000394164 CPSF1Q10570 1443 aaKnown RBP12.34□□□□□ -0.43
PSEN1-204ENST00000394164 UQCRHLA0A096LP55 91 aa12.34□□□□□ -0.43
PSEN1-204ENST00000394164 UQCRHP07919 91 aa12.34□□□□□ -0.43
PSEN1-204ENST00000394164 HSP90AB1P08238 724 aaKnown RBP12.34□□□□□ -0.43
PSEN1-204ENST00000394164 ANP32BQ92688 251 aaKnown RBP12.34□□□□□ -0.43
PSEN1-204ENST00000394164 KIF20BQ96Q89 1820 aa12.34□□□□□ -0.43
PSEN1-204ENST00000394164 SPATA31D1Q6ZQQ2 1576 aa12.33□□□□□ -0.43
PSEN1-204ENST00000394164 OFD1O75665 1012 aa12.33□□□□□ -0.44
PSEN1-204ENST00000394164 EID1Q9Y6B2 187 aa12.33□□□□□ -0.44
PSEN1-204ENST00000394164 ATP7BP35670 1465 aa12.33□□□□□ -0.44
PSEN1-204ENST00000394164 HDAC1Q13547 482 aaPredicted RBP12.33□□□□□ -0.44
PSEN1-204ENST00000394164 IFT57Q9NWB7 429 aa12.33□□□□□ -0.44
PSEN1-204ENST00000394164 ZBTB7BO15156 539 aaPredicted RBP12.32□□□□□ -0.44
PSEN1-204ENST00000394164 ALDH1L2Q3SY69 923 aa12.32□□□□□ -0.44
PSEN1-204ENST00000394164 CFAP44Q96MT7 982 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms