RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 SKOR2Q2VWA4 1001 aaPredicted RBP17.95■□□□□ 0.46
SFXN3-202ENST00000393459 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.94■□□□□ 0.46
SFXN3-202ENST00000393459 YEATS2Q9ULM3 1422 aa17.94■□□□□ 0.46
SFXN3-202ENST00000393459 ADGRB3O60242 1522 aa17.94■□□□□ 0.46
SFXN3-202ENST00000393459 RBM25P49756 843 aaKnown RBP17.94■□□□□ 0.46
SFXN3-202ENST00000393459 CBX1P83916 185 aa17.94■□□□□ 0.46
SFXN3-202ENST00000393459 SOX12O15370 315 aa17.93■□□□□ 0.46
SFXN3-202ENST00000393459 CAMSAP1Q5T5Y3 1602 aa17.93■□□□□ 0.46
SFXN3-202ENST00000393459 HDAC1Q13547 482 aaPredicted RBP17.93■□□□□ 0.46
SFXN3-202ENST00000393459 SLC24A1O60721 1099 aa17.92■□□□□ 0.46
SFXN3-202ENST00000393459 ZC3H13Q5T200 1668 aaKnown RBP17.92■□□□□ 0.46
SFXN3-202ENST00000393459 ARHGAP31Q2M1Z3 1444 aa17.92■□□□□ 0.46
SFXN3-202ENST00000393459 KRT24Q2M2I5 525 aa17.92■□□□□ 0.46
SFXN3-202ENST00000393459 GPT2Q8TD30 523 aa17.92■□□□□ 0.46
SFXN3-202ENST00000393459 MINK1Q8N4C8 1332 aaPredicted RBP17.92■□□□□ 0.46
SFXN3-202ENST00000393459 DDIT3P35638 169 aa17.92■□□□□ 0.46
SFXN3-202ENST00000393459 NOS1P29475 1434 aa17.92■□□□□ 0.46
SFXN3-202ENST00000393459 MYOM1P52179 1685 aa17.91■□□□□ 0.46
SFXN3-202ENST00000393459 IFT172Q9UG01 1749 aa17.91■□□□□ 0.46
SFXN3-202ENST00000393459 KLHL40Q2TBA0 621 aa17.91■□□□□ 0.46
SFXN3-202ENST00000393459 TMEM63CQ9P1W3 806 aa17.91■□□□□ 0.46
SFXN3-202ENST00000393459 RPGRIP1LQ68CZ1 1315 aa17.91■□□□□ 0.46
SFXN3-202ENST00000393459 MROH2AA6NES4 1674 aa17.91■□□□□ 0.46
SFXN3-202ENST00000393459 FAM83GA6ND36 823 aa17.91■□□□□ 0.46
SFXN3-202ENST00000393459 SPDYE4A6NLX3 237 aa17.91■□□□□ 0.46
SFXN3-202ENST00000393459 GSPT1P15170 499 aaKnown RBP17.91■□□□□ 0.46
SFXN3-202ENST00000393459 NRXN1Q9ULB1 1477 aa17.91■□□□□ 0.46
SFXN3-202ENST00000393459 NINLQ9Y2I6 1382 aa17.9■□□□□ 0.46
SFXN3-202ENST00000393459 MAPK8IP2Q13387 824 aaPredicted RBP17.9■□□□□ 0.46
SFXN3-202ENST00000393459 SIRT2Q8IXJ6 389 aa17.9■□□□□ 0.46
SFXN3-202ENST00000393459 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.9■□□□□ 0.46
SFXN3-202ENST00000393459 PRKAR2BP31323 418 aa17.9■□□□□ 0.46
SFXN3-202ENST00000393459 IPO8O15397 1037 aaKnown RBP17.89■□□□□ 0.45
SFXN3-202ENST00000393459 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.89■□□□□ 0.45
SFXN3-202ENST00000393459 SNX21Q969T3 373 aa17.89■□□□□ 0.45
SFXN3-202ENST00000393459 LMBRD1Q9NUN5 540 aa17.89■□□□□ 0.45
SFXN3-202ENST00000393459 CHMP3Q9Y3E7 222 aa17.89■□□□□ 0.45
SFXN3-202ENST00000393459 KIF16BQ96L93 1317 aa17.88■□□□□ 0.45
SFXN3-202ENST00000393459 POLR3AO14802 1390 aaPredicted RBP17.88■□□□□ 0.45
SFXN3-202ENST00000393459 TTC12Q9H892 705 aaPredicted RBP17.88■□□□□ 0.45
SFXN3-202ENST00000393459 CFAP65Q6ZU64 1925 aaKnown RBP17.88■□□□□ 0.45
SFXN3-202ENST00000393459 BMP2KLQ5H9B9 411 aa17.87■□□□□ 0.45
SFXN3-202ENST00000393459 ERVK-7P63135 1459 aa17.87■□□□□ 0.45
SFXN3-202ENST00000393459 PHACTR3Q96KR7 559 aa17.87■□□□□ 0.45
SFXN3-202ENST00000393459 UPF3BQ9BZI7 483 aaKnown RBP17.87■□□□□ 0.45
SFXN3-202ENST00000393459 NEK4P51957 841 aa17.86■□□□□ 0.45
SFXN3-202ENST00000393459 CDC45O75419 566 aa17.86■□□□□ 0.45
SFXN3-202ENST00000393459 SLC4A10Q6U841 1118 aa17.86■□□□□ 0.45
SFXN3-202ENST00000393459 PPP1R9BQ96SB3 815 aa17.86■□□□□ 0.45
SFXN3-202ENST00000393459 CIZ1Q9ULV3 898 aaPredicted RBP17.85■□□□□ 0.45
SFXN3-202ENST00000393459 TSPOAP1O95153 1857 aa17.85■□□□□ 0.45
SFXN3-202ENST00000393459 SLC52A1Q9NWF4 448 aa17.84■□□□□ 0.45
SFXN3-202ENST00000393459 USP25Q9UHP3 1055 aa17.84■□□□□ 0.45
SFXN3-202ENST00000393459 PIK3C2BO00750 1634 aa17.84■□□□□ 0.45
SFXN3-202ENST00000393459 NECTIN2Q92692 538 aa17.84■□□□□ 0.45
SFXN3-202ENST00000393459 ZNF428Q96B54 188 aa17.84■□□□□ 0.45
SFXN3-202ENST00000393459 REREQ9P2R6 1566 aa17.84■□□□□ 0.45
SFXN3-202ENST00000393459 KDM5AP29375 1690 aaKnown RBP17.84■□□□□ 0.45
SFXN3-202ENST00000393459 PPLO60437 1756 aa17.83■□□□□ 0.45
SFXN3-202ENST00000393459 ZBTB7BO15156 539 aaPredicted RBP17.83■□□□□ 0.45
SFXN3-202ENST00000393459 SIGLEC1Q9BZZ2 1709 aa17.83■□□□□ 0.45
SFXN3-202ENST00000393459 SETBP1Q9Y6X0 1596 aa17.83■□□□□ 0.45
SFXN3-202ENST00000393459 NPC1L1Q9UHC9 1359 aa17.83■□□□□ 0.45
SFXN3-202ENST00000393459 VIRMAQ69YN4 1812 aaKnown RBP17.83■□□□□ 0.44
SFXN3-202ENST00000393459 PRDM4Q9UKN5 801 aa17.83■□□□□ 0.44
SFXN3-202ENST00000393459 PPP6R1Q9UPN7 881 aa17.83■□□□□ 0.44
SFXN3-202ENST00000393459 MYO3AQ8NEV4 1616 aa17.83■□□□□ 0.44
SFXN3-202ENST00000393459 CCDC27Q2M243 656 aa17.83■□□□□ 0.44
SFXN3-202ENST00000393459 PHF23Q9BUL5 403 aaPredicted RBP17.83■□□□□ 0.44
SFXN3-202ENST00000393459 SPC24Q8NBT2 197 aa17.82■□□□□ 0.44
SFXN3-202ENST00000393459 MIS18AQ9NYP9 233 aa17.82■□□□□ 0.44
SFXN3-202ENST00000393459 GADD45BO75293 160 aaPredicted RBP17.82■□□□□ 0.44
SFXN3-202ENST00000393459 ZKSCAN5Q9Y2L8 839 aa17.82■□□□□ 0.44
SFXN3-202ENST00000393459 PPIP5K1Q6PFW1 1433 aa17.81■□□□□ 0.44
SFXN3-202ENST00000393459 DIAPH1O60610 1272 aaKnown RBP17.81■□□□□ 0.44
SFXN3-202ENST00000393459 C14orf93Q9H972 538 aaKnown RBP17.81■□□□□ 0.44
SFXN3-202ENST00000393459 NOL7Q9UMY1 257 aaKnown RBP17.81■□□□□ 0.44
SFXN3-202ENST00000393459 ZDHHC9Q9Y397 364 aa17.81■□□□□ 0.44
SFXN3-202ENST00000393459 NGEFQ8N5V2 710 aa17.81■□□□□ 0.44
SFXN3-202ENST00000393459 RILPL2Q969X0 211 aa17.81■□□□□ 0.44
SFXN3-202ENST00000393459 ISY1Q9ULR0 285 aaKnown RBP17.81■□□□□ 0.44
SFXN3-202ENST00000393459 AGLP35573 1532 aa17.81■□□□□ 0.44
SFXN3-202ENST00000393459 VGFO15240 615 aaPredicted RBP17.8■□□□□ 0.44
SFXN3-202ENST00000393459 MAP4K4O95819 1239 aaPredicted RBP17.8■□□□□ 0.44
SFXN3-202ENST00000393459 C8orf58Q8NAV2 365 aa17.8■□□□□ 0.44
SFXN3-202ENST00000393459 DDX54Q8TDD1 881 aaKnown RBP17.8■□□□□ 0.44
SFXN3-202ENST00000393459 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.8■□□□□ 0.44
SFXN3-202ENST00000393459 PLEKHM2Q8IWE5 1019 aa17.8■□□□□ 0.44
SFXN3-202ENST00000393459 SDSP20132 328 aa17.8■□□□□ 0.44
SFXN3-202ENST00000393459 TRIM6-TRIM34B2RNG4 842 aa17.79■□□□□ 0.44
SFXN3-202ENST00000393459 SBNO2Q9Y2G9 1366 aa17.79■□□□□ 0.44
SFXN3-202ENST00000393459 AAMPQ13685 434 aa17.78■□□□□ 0.44
SFXN3-202ENST00000393459 NUTM2FA1L443 756 aa17.78■□□□□ 0.44
SFXN3-202ENST00000393459 NUCB2P80303 420 aa17.78■□□□□ 0.44
SFXN3-202ENST00000393459 IDI1Q13907 227 aa17.78■□□□□ 0.44
SFXN3-202ENST00000393459 ZRANB1Q9UGI0 708 aa17.78■□□□□ 0.44
SFXN3-202ENST00000393459 ST18O60284 1047 aa17.78■□□□□ 0.44
SFXN3-202ENST00000393459 TWISTNBQ3B726 338 aaPredicted RBP17.78■□□□□ 0.44
SFXN3-202ENST00000393459 PLEKHF1Q96S99 279 aa17.77■□□□□ 0.44
SFXN3-202ENST00000393459 EXOC6BQ9Y2D4 811 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms