RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 SHANK3Q9BYB0 1731 aa18.02■□□□□ 0.47
USP44-202ENST00000393091 HOXC9P31274 260 aa18.01■□□□□ 0.47
USP44-202ENST00000393091 ILDR1Q86SU0 546 aaPredicted RBP18■□□□□ 0.47
USP44-202ENST00000393091 FAM83GA6ND36 823 aa18■□□□□ 0.47
USP44-202ENST00000393091 GLI3P10071 1580 aa17.99■□□□□ 0.47
USP44-202ENST00000393091 CC2D1BQ5T0F9 858 aaKnown RBP17.99■□□□□ 0.47
USP44-202ENST00000393091 CABLES1Q8TDN4 633 aa17.98■□□□□ 0.47
USP44-202ENST00000393091 NUTM2GQ5VZR2 741 aa17.98■□□□□ 0.47
USP44-202ENST00000393091 ADAMTS7Q9UKP4 1686 aa17.98■□□□□ 0.47
USP44-202ENST00000393091 DISP2A7MBM2 1401 aa17.97■□□□□ 0.47
USP44-202ENST00000393091 CRB1P82279 1406 aa17.97■□□□□ 0.47
USP44-202ENST00000393091 KDRP35968 1356 aa17.97■□□□□ 0.47
USP44-202ENST00000393091 ERBB3P21860 1342 aa17.96■□□□□ 0.47
USP44-202ENST00000393091 CCER2I3L3R5 266 aa17.96■□□□□ 0.47
USP44-202ENST00000393091 WDR17Q8IZU2 1322 aa17.95■□□□□ 0.46
USP44-202ENST00000393091 LRRC37A3O60309 1634 aa17.95■□□□□ 0.46
USP44-202ENST00000393091 ANP32CO43423 234 aa17.94■□□□□ 0.46
USP44-202ENST00000393091 LMOD2Q6P5Q4 547 aa17.94■□□□□ 0.46
USP44-202ENST00000393091 IL13P35225 146 aa17.94■□□□□ 0.46
USP44-202ENST00000393091 AXIN2Q9Y2T1 843 aa17.94■□□□□ 0.46
USP44-202ENST00000393091 EMILIN1Q9Y6C2 1016 aa17.94■□□□□ 0.46
USP44-202ENST00000393091 VPS72Q15906 364 aa17.93■□□□□ 0.46
USP44-202ENST00000393091 MTHFSP49914 203 aa17.93■□□□□ 0.46
USP44-202ENST00000393091 THRAP3Q9Y2W1 955 aaKnown RBP17.93■□□□□ 0.46
USP44-202ENST00000393091 IGSF1Q8N6C5 1336 aa17.93■□□□□ 0.46
USP44-202ENST00000393091 DIEXFQ68CQ4 756 aaKnown RBP17.93■□□□□ 0.46
USP44-202ENST00000393091 UNC5CLQ8IV45 518 aa17.93■□□□□ 0.46
USP44-202ENST00000393091 PRDM11Q9NQV5 511 aa17.93■□□□□ 0.46
USP44-202ENST00000393091 RRS1Q15050 365 aaKnown RBP17.92■□□□□ 0.46
USP44-202ENST00000393091 VIRMAQ69YN4 1812 aaKnown RBP17.92■□□□□ 0.46
USP44-202ENST00000393091 SPATA31A5Q5VU36 1347 aa17.9■□□□□ 0.46
USP44-202ENST00000393091 SPATA31A7Q8IWB4 1347 aa17.9■□□□□ 0.46
USP44-202ENST00000393091 ONECUT3O60422 494 aaPredicted RBP17.9■□□□□ 0.46
USP44-202ENST00000393091 ZC3H6P61129 1189 aaKnown RBP17.9■□□□□ 0.46
USP44-202ENST00000393091 CARD10Q9BWT7 1032 aa17.9■□□□□ 0.46
USP44-202ENST00000393091 BARGINQ6ZT62 677 aa17.89■□□□□ 0.46
USP44-202ENST00000393091 AMPHP49418 695 aa17.89■□□□□ 0.45
USP44-202ENST00000393091 EIF4A2Q14240 407 aaKnown RBP17.89■□□□□ 0.45
USP44-202ENST00000393091 CFAP53Q96M91 514 aa17.89■□□□□ 0.45
USP44-202ENST00000393091 ZNF772Q68DY9 489 aaPredicted RBP17.88■□□□□ 0.45
USP44-202ENST00000393091 SPATA31A1Q5TZJ5 1347 aa17.88■□□□□ 0.45
USP44-202ENST00000393091 AFF2P51816 1311 aa17.88■□□□□ 0.45
USP44-202ENST00000393091 BCL9O00512 1426 aa17.88■□□□□ 0.45
USP44-202ENST00000393091 HSP90AB2PQ58FF8 381 aa17.87■□□□□ 0.45
USP44-202ENST00000393091 ANKRD24Q8TF21 1146 aa17.87■□□□□ 0.45
USP44-202ENST00000393091 HAP1P54257 671 aaPredicted RBP17.87■□□□□ 0.45
USP44-202ENST00000393091 NCBP3Q53F19 620 aaKnown RBP17.87■□□□□ 0.45
USP44-202ENST00000393091 BTG4Q9NY30 223 aa17.87■□□□□ 0.45
USP44-202ENST00000393091 OVOS2A0A0G2JMS6 1433 aa17.87■□□□□ 0.45
USP44-202ENST00000393091 FBLN1P23142 703 aa17.87■□□□□ 0.45
USP44-202ENST00000393091 BRWD3Q6RI45 1802 aa17.86■□□□□ 0.45
USP44-202ENST00000393091 DIAPH1O60610 1272 aaKnown RBP17.85■□□□□ 0.45
USP44-202ENST00000393091 CDCA7Q9BWT1 371 aaPredicted RBP17.85■□□□□ 0.45
USP44-202ENST00000393091 NUTM2BA6NNL0 878 aaPredicted RBP17.85■□□□□ 0.45
USP44-202ENST00000393091 NUTM2EB1AL46 878 aaPredicted RBP17.85■□□□□ 0.45
USP44-202ENST00000393091 NUTM2AQ8IVF1 878 aaPredicted RBP17.85■□□□□ 0.45
USP44-202ENST00000393091 DLG5Q8TDM6 1919 aa17.85■□□□□ 0.45
USP44-202ENST00000393091 SIPA1L3O60292 1781 aaPredicted RBP17.85■□□□□ 0.45
USP44-202ENST00000393091 CHRNA2Q15822 529 aa17.84■□□□□ 0.45
USP44-202ENST00000393091 SCN11AQ9UI33 1791 aa17.84■□□□□ 0.45
USP44-202ENST00000393091 ADAMTS2O95450 1211 aa17.84■□□□□ 0.45
USP44-202ENST00000393091 RGS17Q9UGC6 210 aaPredicted RBP17.84■□□□□ 0.45
USP44-202ENST00000393091 TRPC5Q9UL62 973 aaPredicted RBP17.84■□□□□ 0.45
USP44-202ENST00000393091 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.83■□□□□ 0.44
USP44-202ENST00000393091 USP21Q9UK80 565 aa17.83■□□□□ 0.44
USP44-202ENST00000393091 NGLY1Q96IV0 654 aa17.83■□□□□ 0.44
USP44-202ENST00000393091 C8orf37Q96NL8 207 aa17.82■□□□□ 0.44
USP44-202ENST00000393091 TNS2Q63HR2 1409 aa17.82■□□□□ 0.44
USP44-202ENST00000393091 SBF2Q86WG5 1849 aa17.82■□□□□ 0.44
USP44-202ENST00000393091 MEX3CQ5U5Q3 659 aaKnown RBP17.82■□□□□ 0.44
USP44-202ENST00000393091 EYA1Q99502 592 aa17.82■□□□□ 0.44
USP44-202ENST00000393091 MEGF6O75095 1541 aa17.81■□□□□ 0.44
USP44-202ENST00000393091 PNISRQ8TF01 805 aaKnown RBP17.81■□□□□ 0.44
USP44-202ENST00000393091 TNNT2P45379 298 aaPredicted RBP17.81■□□□□ 0.44
USP44-202ENST00000393091 NBPF6Q5VWK0 638 aa17.81■□□□□ 0.44
USP44-202ENST00000393091 NBPF4Q96M43 638 aa17.81■□□□□ 0.44
USP44-202ENST00000393091 FCHSD2O94868 740 aa17.8■□□□□ 0.44
USP44-202ENST00000393091 RGPD3A6NKT7 1758 aaPredicted RBP17.8■□□□□ 0.44
USP44-202ENST00000393091 RGPD4Q7Z3J3 1758 aa17.8■□□□□ 0.44
USP44-202ENST00000393091 LARP1Q6PKG0 1096 aaKnown RBP17.8■□□□□ 0.44
USP44-202ENST00000393091 NUDCQ9Y266 331 aa17.8■□□□□ 0.44
USP44-202ENST00000393091 CICQ96RK0 1608 aaPredicted RBP17.79■□□□□ 0.44
USP44-202ENST00000393091 TCP11L2Q8N4U5 519 aa17.79■□□□□ 0.44
USP44-202ENST00000393091 GJD4Q96KN9 370 aaPredicted RBP17.79■□□□□ 0.44
USP44-202ENST00000393091 PLEKHF1Q96S99 279 aa17.79■□□□□ 0.44
USP44-202ENST00000393091 PAPPAQ13219 1627 aa17.79■□□□□ 0.44
USP44-202ENST00000393091 MRC1P22897 1456 aa17.79■□□□□ 0.44
USP44-202ENST00000393091 ZNF831Q5JPB2 1677 aa17.78■□□□□ 0.44
USP44-202ENST00000393091 NHSQ6T4R5 1651 aa17.78■□□□□ 0.44
USP44-202ENST00000393091 TOGARAM1Q9Y4F4 1720 aa17.78■□□□□ 0.44
USP44-202ENST00000393091 RSPH6AQ9H0K4 717 aa17.78■□□□□ 0.44
USP44-202ENST00000393091 PNNQ9H307 717 aaKnown RBP17.77■□□□□ 0.44
USP44-202ENST00000393091 SOX12O15370 315 aa17.76■□□□□ 0.43
USP44-202ENST00000393091 EVA1CP58658 441 aa17.76■□□□□ 0.43
USP44-202ENST00000393091 RBM6P78332 1123 aaKnown RBP17.75■□□□□ 0.43
USP44-202ENST00000393091 CCDC184Q52MB2 194 aa17.75■□□□□ 0.43
USP44-202ENST00000393091 ITGB4P16144 1822 aa17.74■□□□□ 0.43
USP44-202ENST00000393091 MIER1Q8N108 512 aa17.74■□□□□ 0.43
USP44-202ENST00000393091 QTRT2Q9H974 415 aaKnown RBP17.73■□□□□ 0.43
USP44-202ENST00000393091 RGS12O14924 1447 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms