RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 XIRP1Q702N8 1843 aaKnown RBP14.95□□□□□ -0.02
SMARCAL1-203ENST00000392128 ORAI2Q96SN7 254 aa14.95□□□□□ -0.02
SMARCAL1-203ENST00000392128 MST1RQ04912 1400 aa14.95□□□□□ -0.02
SMARCAL1-203ENST00000392128 HMOX1P09601 288 aa14.94□□□□□ -0.02
SMARCAL1-203ENST00000392128 RIPK4P57078 832 aa14.94□□□□□ -0.02
SMARCAL1-203ENST00000392128 HSP90AB2PQ58FF8 381 aa14.94□□□□□ -0.02
SMARCAL1-203ENST00000392128 LTN1O94822 1766 aa14.93□□□□□ -0.02
SMARCAL1-203ENST00000392128 IL16Q14005 1332 aa14.93□□□□□ -0.02
SMARCAL1-203ENST00000392128 SOX12O15370 315 aa14.93□□□□□ -0.02
SMARCAL1-203ENST00000392128 ATF3P18847 181 aa14.93□□□□□ -0.02
SMARCAL1-203ENST00000392128 MYH16Q9H6N6 1097 aa14.93□□□□□ -0.02
SMARCAL1-203ENST00000392128 DLG5Q8TDM6 1919 aa14.93□□□□□ -0.02
SMARCAL1-203ENST00000392128 NFAT5O94916 1531 aa14.92□□□□□ -0.02
SMARCAL1-203ENST00000392128 ARHGEF10O15013 1369 aa14.92□□□□□ -0.02
SMARCAL1-203ENST00000392128 PHRF1Q9P1Y6 1649 aaKnown RBP14.92□□□□□ -0.02
SMARCAL1-203ENST00000392128 NFE2L2Q16236 605 aa14.92□□□□□ -0.02
SMARCAL1-203ENST00000392128 NUTM2GQ5VZR2 741 aa14.92□□□□□ -0.02
SMARCAL1-203ENST00000392128 PHACTR3Q96KR7 559 aa14.92□□□□□ -0.02
SMARCAL1-203ENST00000392128 RTL1A6NKG5 1358 aa14.91□□□□□ -0.02
SMARCAL1-203ENST00000392128 AMPHP49418 695 aa14.91□□□□□ -0.02
SMARCAL1-203ENST00000392128 FOXO3O43524 673 aa14.91□□□□□ -0.02
SMARCAL1-203ENST00000392128 CADPS2Q86UW7 1296 aa14.9□□□□□ -0.02
SMARCAL1-203ENST00000392128 MSH6P52701 1360 aa14.9□□□□□ -0.02
SMARCAL1-203ENST00000392128 SLIT3O75094 1523 aa14.9□□□□□ -0.02
SMARCAL1-203ENST00000392128 ALS2Q96Q42 1657 aa14.89□□□□□ -0.03
SMARCAL1-203ENST00000392128 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.89□□□□□ -0.03
SMARCAL1-203ENST00000392128 HOXC9P31274 260 aa14.88□□□□□ -0.03
SMARCAL1-203ENST00000392128 SULT6B1Q6IMI4 303 aa14.88□□□□□ -0.03
SMARCAL1-203ENST00000392128 KCNH5Q8NCM2 988 aa14.88□□□□□ -0.03
SMARCAL1-203ENST00000392128 KDRP35968 1356 aa14.88□□□□□ -0.03
SMARCAL1-203ENST00000392128 PLIN1O60240 522 aa14.88□□□□□ -0.03
SMARCAL1-203ENST00000392128 KRT28Q7Z3Y7 464 aa14.87□□□□□ -0.03
SMARCAL1-203ENST00000392128 AEBP1Q8IUX7 1158 aa14.87□□□□□ -0.03
SMARCAL1-203ENST00000392128 IGSF1Q8N6C5 1336 aa14.87□□□□□ -0.03
SMARCAL1-203ENST00000392128 FANCIQ9NVI1 1328 aa14.87□□□□□ -0.03
SMARCAL1-203ENST00000392128 CT47B1P0C2W7 299 aaPredicted RBP14.87□□□□□ -0.03
SMARCAL1-203ENST00000392128 LMOD3Q0VAK6 560 aa14.87□□□□□ -0.03
SMARCAL1-203ENST00000392128 B4GALNT3Q6L9W6 998 aa14.86□□□□□ -0.03
SMARCAL1-203ENST00000392128 USP19O94966 1318 aa14.86□□□□□ -0.03
SMARCAL1-203ENST00000392128 CALD1Q05682 793 aaKnown RBP14.86□□□□□ -0.03
SMARCAL1-203ENST00000392128 EXOC6Q8TAG9 804 aa14.86□□□□□ -0.03
SMARCAL1-203ENST00000392128 XPCQ01831 940 aaPredicted RBP14.85□□□□□ -0.03
SMARCAL1-203ENST00000392128 BCAR3O75815 825 aa14.84□□□□□ -0.03
SMARCAL1-203ENST00000392128 EYA1Q99502 592 aa14.84□□□□□ -0.03
SMARCAL1-203ENST00000392128 ZNF335Q9H4Z2 1342 aaPredicted RBP14.84□□□□□ -0.03
SMARCAL1-203ENST00000392128 RARSP54136 660 aaKnown RBP14.84□□□□□ -0.03
SMARCAL1-203ENST00000392128 IP6K1Q92551 441 aa14.84□□□□□ -0.03
SMARCAL1-203ENST00000392128 TSR2Q969E8 191 aaKnown RBP14.84□□□□□ -0.03
SMARCAL1-203ENST00000392128 NPHP3Q7Z494 1330 aa14.83□□□□□ -0.04
SMARCAL1-203ENST00000392128 CCDC136Q96JN2 1154 aa14.83□□□□□ -0.04
SMARCAL1-203ENST00000392128 GCP02774 474 aa14.82□□□□□ -0.04
SMARCAL1-203ENST00000392128 C20orf194Q5TEA3 1177 aa14.82□□□□□ -0.04
SMARCAL1-203ENST00000392128 CRBNQ96SW2 442 aa14.82□□□□□ -0.04
SMARCAL1-203ENST00000392128 IFT57Q9NWB7 429 aa14.82□□□□□ -0.04
SMARCAL1-203ENST00000392128 PXDNQ92626 1479 aa14.82□□□□□ -0.04
SMARCAL1-203ENST00000392128 MED1Q15648 1581 aaPredicted RBP14.81□□□□□ -0.04
SMARCAL1-203ENST00000392128 EXOSC9Q06265 439 aaKnown RBP14.81□□□□□ -0.04
SMARCAL1-203ENST00000392128 ARHGEF25Q86VW2 580 aa14.81□□□□□ -0.04
SMARCAL1-203ENST00000392128 ZNF853P0CG23 659 aa14.8□□□□□ -0.04
SMARCAL1-203ENST00000392128 GNAI1P63096 354 aa14.8□□□□□ -0.04
SMARCAL1-203ENST00000392128 LMOD2Q6P5Q4 547 aa14.8□□□□□ -0.04
SMARCAL1-203ENST00000392128 TNS3Q68CZ2 1445 aa14.8□□□□□ -0.04
SMARCAL1-203ENST00000392128 CRYBG1Q9Y4K1 1723 aa14.79□□□□□ -0.04
SMARCAL1-203ENST00000392128 PDE3AQ14432 1141 aa14.79□□□□□ -0.04
SMARCAL1-203ENST00000392128 THUMPD2Q9BTF0 503 aaKnown RBP14.79□□□□□ -0.04
SMARCAL1-203ENST00000392128 CFAP44Q96MT7 982 aa14.78□□□□□ -0.04
SMARCAL1-203ENST00000392128 RGPD2P0DJD1 1756 aa14.78□□□□□ -0.04
SMARCAL1-203ENST00000392128 FAM83GA6ND36 823 aa14.77□□□□□ -0.04
SMARCAL1-203ENST00000392128 BRINP3Q76B58 766 aa14.77□□□□□ -0.04
SMARCAL1-203ENST00000392128 CAMTA1Q9Y6Y1 1673 aa14.77□□□□□ -0.04
SMARCAL1-203ENST00000392128 GAS2L2Q8NHY3 880 aa14.77□□□□□ -0.05
SMARCAL1-203ENST00000392128 DDX17Q92841 729 aaKnown RBP14.77□□□□□ -0.05
SMARCAL1-203ENST00000392128 LTV1Q96GA3 475 aaPredicted RBP14.77□□□□□ -0.05
SMARCAL1-203ENST00000392128 MTHFSDQ2M296 383 aaKnown RBP14.76□□□□□ -0.05
SMARCAL1-203ENST00000392128 ZNF428Q96B54 188 aa14.76□□□□□ -0.05
SMARCAL1-203ENST00000392128 CANXP27824 592 aaKnown RBP14.76□□□□□ -0.05
SMARCAL1-203ENST00000392128 LAS1LQ9Y4W2 734 aaKnown RBP14.76□□□□□ -0.05
SMARCAL1-203ENST00000392128 SPATA31A3Q5VYP0 1347 aa14.76□□□□□ -0.05
SMARCAL1-203ENST00000392128 NCAPD2Q15021 1401 aa14.76□□□□□ -0.05
SMARCAL1-203ENST00000392128 BCL11AQ9H165 835 aa14.75□□□□□ -0.05
SMARCAL1-203ENST00000392128 MBIPQ9NS73 344 aa14.75□□□□□ -0.05
SMARCAL1-203ENST00000392128 SLAIN2Q9P270 581 aa14.75□□□□□ -0.05
SMARCAL1-203ENST00000392128 ABCC6O95255 1503 aa14.75□□□□□ -0.05
SMARCAL1-203ENST00000392128 LRRC37A3O60309 1634 aa14.75□□□□□ -0.05
SMARCAL1-203ENST00000392128 RGPD5Q99666 1765 aa14.75□□□□□ -0.05
SMARCAL1-203ENST00000392128 DCTN1Q14203 1278 aa14.75□□□□□ -0.05
SMARCAL1-203ENST00000392128 HTATSF1O43719 755 aaKnown RBP14.74□□□□□ -0.05
SMARCAL1-203ENST00000392128 CRB1P82279 1406 aa14.74□□□□□ -0.05
SMARCAL1-203ENST00000392128 ZBTB7CA1YPR0 619 aa14.74□□□□□ -0.05
SMARCAL1-203ENST00000392128 ALDH1L2Q3SY69 923 aa14.74□□□□□ -0.05
SMARCAL1-203ENST00000392128 NBPF6Q5VWK0 638 aa14.74□□□□□ -0.05
SMARCAL1-203ENST00000392128 FRAT1Q92837 279 aaPredicted RBP14.74□□□□□ -0.05
SMARCAL1-203ENST00000392128 NBPF4Q96M43 638 aa14.74□□□□□ -0.05
SMARCAL1-203ENST00000392128 BCL2L13Q9BXK5 485 aa14.74□□□□□ -0.05
SMARCAL1-203ENST00000392128 COL18A1P39060 1754 aa14.74□□□□□ -0.05
SMARCAL1-203ENST00000392128 SSH1Q8WYL5 1049 aa14.73□□□□□ -0.05
SMARCAL1-203ENST00000392128 SMC4Q9NTJ3 1288 aa14.73□□□□□ -0.05
SMARCAL1-203ENST00000392128 NHSL1Q5SYE7 1610 aa14.73□□□□□ -0.05
SMARCAL1-203ENST00000392128 MCM10Q7L590 875 aa14.73□□□□□ -0.05
SMARCAL1-203ENST00000392128 LMO7Q8WWI1 1683 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms