RNA–Protein interactions for RNA: ENST00000391975.5

HDLBP-203, Transcript of high density lipoprotein binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDLBP, Length 6,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-203ENST00000391975 C1orf141Q5JVX7 400 aa13.81□□□□□ -0.2
HDLBP-203ENST00000391975 THUMPD2Q9BTF0 503 aaKnown RBP13.81□□□□□ -0.2
HDLBP-203ENST00000391975 TSPYL1Q9H0U9 437 aa13.81□□□□□ -0.2
HDLBP-203ENST00000391975 CAMSAP2Q08AD1 1489 aa13.81□□□□□ -0.2
HDLBP-203ENST00000391975 LEKR1Q6ZMV7 388 aa13.81□□□□□ -0.2
HDLBP-203ENST00000391975 CAGE1Q8TC20 777 aa13.8□□□□□ -0.2
HDLBP-203ENST00000391975 BMP2KLQ5H9B9 411 aa13.8□□□□□ -0.2
HDLBP-203ENST00000391975 C9orf78Q9NZ63 289 aaPredicted RBP13.8□□□□□ -0.2
HDLBP-203ENST00000391975 SURF6O75683 361 aaKnown RBP13.8□□□□□ -0.2
HDLBP-203ENST00000391975 TBC1D9Q6ZT07 1266 aa13.8□□□□□ -0.2
HDLBP-203ENST00000391975 SPINK5Q9NQ38 1064 aaPredicted RBP13.8□□□□□ -0.2
HDLBP-203ENST00000391975 RLBP1P12271 317 aa13.8□□□□□ -0.2
HDLBP-203ENST00000391975 CBX1P83916 185 aa13.8□□□□□ -0.2
HDLBP-203ENST00000391975 RNF20Q5VTR2 975 aa13.8□□□□□ -0.2
HDLBP-203ENST00000391975 CCDC73Q6ZRK6 1079 aa13.8□□□□□ -0.2
HDLBP-203ENST00000391975 MYO6Q9UM54 1294 aa13.8□□□□□ -0.2
HDLBP-203ENST00000391975 FOSBP53539 338 aa13.79□□□□□ -0.2
HDLBP-203ENST00000391975 SKIDA1Q1XH10 827 aa13.79□□□□□ -0.2
HDLBP-203ENST00000391975 UPF3BQ9BZI7 483 aaKnown RBP13.79□□□□□ -0.2
HDLBP-203ENST00000391975 BIVM-ERCC5R4GMW8 1640 aa13.79□□□□□ -0.2
HDLBP-203ENST00000391975 GNAI3P08754 354 aa13.79□□□□□ -0.2
HDLBP-203ENST00000391975 UBTFL1P0CB47 393 aaPredicted RBP13.79□□□□□ -0.2
HDLBP-203ENST00000391975 TRIM29Q14134 588 aa13.79□□□□□ -0.2
HDLBP-203ENST00000391975 PDCL2Q8N4E4 241 aa13.79□□□□□ -0.2
HDLBP-203ENST00000391975 GPRASP1Q5JY77 1395 aa13.79□□□□□ -0.2
HDLBP-203ENST00000391975 SLC4A2P04920 1241 aa13.79□□□□□ -0.2
HDLBP-203ENST00000391975 SYNE3Q6ZMZ3 975 aa13.79□□□□□ -0.2
HDLBP-203ENST00000391975 RBM27Q9P2N5 1060 aaKnown RBP13.79□□□□□ -0.2
HDLBP-203ENST00000391975 RALGAPBQ86X10 1494 aa13.79□□□□□ -0.2
HDLBP-203ENST00000391975 CCDC192P0DO97 292 aa13.79□□□□□ -0.2
HDLBP-203ENST00000391975 ZNF428Q96B54 188 aa13.79□□□□□ -0.2
HDLBP-203ENST00000391975 STRN4Q9NRL3 753 aa13.78□□□□□ -0.2
HDLBP-203ENST00000391975 ARHGAP5Q13017 1502 aa13.78□□□□□ -0.2
HDLBP-203ENST00000391975 CCDC112Q8NEF3 446 aa13.78□□□□□ -0.2
HDLBP-203ENST00000391975 RBM42Q9BTD8 480 aaKnown RBP13.77□□□□□ -0.2
HDLBP-203ENST00000391975 ZHX1Q9UKY1 873 aaPredicted RBP13.77□□□□□ -0.2
HDLBP-203ENST00000391975 RPAP2Q8IXW5 612 aaPredicted RBP13.77□□□□□ -0.2
HDLBP-203ENST00000391975 TESK2Q96S53 571 aa13.77□□□□□ -0.2
HDLBP-203ENST00000391975 USP25Q9UHP3 1055 aa13.77□□□□□ -0.21
HDLBP-203ENST00000391975 GNAI2P04899 355 aa13.76□□□□□ -0.21
HDLBP-203ENST00000391975 ESCO1Q5FWF5 840 aa13.76□□□□□ -0.21
HDLBP-203ENST00000391975 TXNDC2Q86VQ3 553 aa13.76□□□□□ -0.21
HDLBP-203ENST00000391975 MRC2Q9UBG0 1479 aa13.76□□□□□ -0.21
HDLBP-203ENST00000391975 SMARCA5O60264 1052 aaPredicted RBP13.76□□□□□ -0.21
HDLBP-203ENST00000391975 HDAC1Q13547 482 aaPredicted RBP13.76□□□□□ -0.21
HDLBP-203ENST00000391975 ZSCAN23Q3MJ62 389 aa13.76□□□□□ -0.21
HDLBP-203ENST00000391975 HSP90AB4PQ58FF6 505 aa13.76□□□□□ -0.21
HDLBP-203ENST00000391975 PEG3Q9GZU2 1588 aa13.76□□□□□ -0.21
HDLBP-203ENST00000391975 SDF4Q9BRK5 362 aa13.76□□□□□ -0.21
HDLBP-203ENST00000391975 GDPD2Q9HCC8 539 aa13.75□□□□□ -0.21
HDLBP-203ENST00000391975 FCHSD2O94868 740 aa13.75□□□□□ -0.21
HDLBP-203ENST00000391975 TEFQ10587 303 aa13.75□□□□□ -0.21
HDLBP-203ENST00000391975 CNTROBQ8N137 903 aa13.75□□□□□ -0.21
HDLBP-203ENST00000391975 LRRCC1Q9C099 1032 aa13.75□□□□□ -0.21
HDLBP-203ENST00000391975 CABP1Q9NZU7 370 aa13.75□□□□□ -0.21
HDLBP-203ENST00000391975 PDCP20941 246 aa13.75□□□□□ -0.21
HDLBP-203ENST00000391975 SYNJ2O15056 1496 aa13.74□□□□□ -0.21
HDLBP-203ENST00000391975 MCM5P33992 734 aa13.74□□□□□ -0.21
HDLBP-203ENST00000391975 G3BP1Q13283 466 aaKnown RBP eCLIP13.74□□□□□ -0.215e-8■■□□□ 14
HDLBP-203ENST00000391975 ALDH1L2Q3SY69 923 aa13.74□□□□□ -0.21
HDLBP-203ENST00000391975 DYDC1Q8WWB3 177 aa13.74□□□□□ -0.21
HDLBP-203ENST00000391975 PRAM1Q96QH2 718 aa13.74□□□□□ -0.21
HDLBP-203ENST00000391975 EXOC6BQ9Y2D4 811 aa13.74□□□□□ -0.21
HDLBP-203ENST00000391975 DNMBPQ6XZF7 1577 aa13.74□□□□□ -0.21
HDLBP-203ENST00000391975 TTC5Q8N0Z6 440 aa13.74□□□□□ -0.21
HDLBP-203ENST00000391975 DYNC1I1O14576 645 aa13.74□□□□□ -0.21
HDLBP-203ENST00000391975 SNX21Q969T3 373 aa13.74□□□□□ -0.21
HDLBP-203ENST00000391975 CTDP1Q9Y5B0 961 aaPredicted RBP13.74□□□□□ -0.21
HDLBP-203ENST00000391975 ZFYVE27Q5T4F4 411 aa13.73□□□□□ -0.21
HDLBP-203ENST00000391975 CLASRPQ8N2M8 674 aaKnown RBP13.73□□□□□ -0.21
HDLBP-203ENST00000391975 UGGT2Q9NYU1 1516 aa13.73□□□□□ -0.21
HDLBP-203ENST00000391975 KIAA0754O94854 1291 aa13.73□□□□□ -0.21
HDLBP-203ENST00000391975 INCENPQ9NQS7 918 aa13.73□□□□□ -0.21
HDLBP-203ENST00000391975 MAP4K4O95819 1239 aaPredicted RBP13.73□□□□□ -0.21
HDLBP-203ENST00000391975 FMNL2Q96PY5 1086 aa13.73□□□□□ -0.21
HDLBP-203ENST00000391975 OFD1O75665 1012 aa13.73□□□□□ -0.21
HDLBP-203ENST00000391975 SMC5Q8IY18 1101 aa13.73□□□□□ -0.21
HDLBP-203ENST00000391975 TNMDQ9H2S6 317 aa13.73□□□□□ -0.21
HDLBP-203ENST00000391975 ARHGEF11O15085 1522 aa13.73□□□□□ -0.21
HDLBP-203ENST00000391975 GOLGA6L7A0A1B0GV03 622 aa13.73□□□□□ -0.21
HDLBP-203ENST00000391975 RAB3GAP1Q15042 981 aa13.73□□□□□ -0.21
HDLBP-203ENST00000391975 NFE2L2Q16236 605 aa13.73□□□□□ -0.21
HDLBP-203ENST00000391975 KRT85P78386 507 aa13.72□□□□□ -0.21
HDLBP-203ENST00000391975 NUCB1Q02818 461 aa13.72□□□□□ -0.21
HDLBP-203ENST00000391975 IL1RAPL2Q9NP60 686 aa13.72□□□□□ -0.21
HDLBP-203ENST00000391975 BICRAQ9NZM4 1560 aa13.72□□□□□ -0.21
HDLBP-203ENST00000391975 AXDND1Q5T1B0 1012 aaPredicted RBP13.72□□□□□ -0.21
HDLBP-203ENST00000391975 GAS2L2Q8NHY3 880 aa13.72□□□□□ -0.21
HDLBP-203ENST00000391975 CEBPZQ03701 1054 aaKnown RBP13.72□□□□□ -0.21
HDLBP-203ENST00000391975 SULT6B1Q6IMI4 303 aa13.72□□□□□ -0.21
HDLBP-203ENST00000391975 PDILTQ8N807 584 aa13.72□□□□□ -0.21
HDLBP-203ENST00000391975 CPLX1O14810 134 aa13.71□□□□□ -0.21
HDLBP-203ENST00000391975 PSMA5P28066 241 aa13.71□□□□□ -0.21
HDLBP-203ENST00000391975 LARP1BQ659C4 914 aaKnown RBP13.71□□□□□ -0.21
HDLBP-203ENST00000391975 ZKSCAN5Q9Y2L8 839 aa13.71□□□□□ -0.21
HDLBP-203ENST00000391975 KINO60870 393 aaKnown RBP13.71□□□□□ -0.21
HDLBP-203ENST00000391975 NLRP2Q9NX02 1062 aa13.71□□□□□ -0.21
HDLBP-203ENST00000391975 CYP46A1Q9Y6A2 500 aa13.71□□□□□ -0.21
HDLBP-203ENST00000391975 CPLX2Q6PUV4 134 aaKnown RBP13.71□□□□□ -0.22
HDLBP-203ENST00000391975 RAD21O60216 631 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms