RNA–Protein interactions for RNA: ENST00000390445.2

TRAV17-201, Transcript of T cell receptor alpha variable 17, humanhuman

APPRIS P1 BASIC

Gene TRAV17, Length 484 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17-201ENST00000390445 C14orf93Q9H972 538 aaKnown RBP12.32□□□□□ -0.44
TRAV17-201ENST00000390445 BRWD3Q6RI45 1802 aa12.32□□□□□ -0.44
TRAV17-201ENST00000390445 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.31□□□□□ -0.44
TRAV17-201ENST00000390445 C2orf72A6NCS6 295 aa12.31□□□□□ -0.44
TRAV17-201ENST00000390445 KIF3CO14782 793 aa12.31□□□□□ -0.44
TRAV17-201ENST00000390445 FOXO3O43524 673 aa12.31□□□□□ -0.44
TRAV17-201ENST00000390445 RXRBP28702 533 aa12.31□□□□□ -0.44
TRAV17-201ENST00000390445 WDR70Q9NW82 654 aa12.31□□□□□ -0.44
TRAV17-201ENST00000390445 RGS12O14924 1447 aa12.3□□□□□ -0.44
TRAV17-201ENST00000390445 PLCH1Q4KWH8 1693 aa12.3□□□□□ -0.44
TRAV17-201ENST00000390445 CDK12Q9NYV4 1490 aaPredicted RBP12.3□□□□□ -0.44
TRAV17-201ENST00000390445 SAFB2Q14151 953 aaKnown RBP eCLIP12.3□□□□□ -0.44
TRAV17-201ENST00000390445 C3orf67Q6ZVT6 689 aa12.3□□□□□ -0.44
TRAV17-201ENST00000390445 DDX27Q96GQ7 796 aaKnown RBP12.3□□□□□ -0.44
TRAV17-201ENST00000390445 TRPM3Q9HCF6 1732 aaPredicted RBP12.3□□□□□ -0.44
TRAV17-201ENST00000390445 DLC1Q96QB1 1528 aa12.3□□□□□ -0.44
TRAV17-201ENST00000390445 NPHP3Q7Z494 1330 aa12.3□□□□□ -0.44
TRAV17-201ENST00000390445 ACIN1Q9UKV3 1341 aaKnown RBP12.3□□□□□ -0.44
TRAV17-201ENST00000390445 ADGRB2O60241 1585 aa12.3□□□□□ -0.44
TRAV17-201ENST00000390445 TMC2Q8TDI7 906 aa12.29□□□□□ -0.44
TRAV17-201ENST00000390445 NGLY1Q96IV0 654 aa12.29□□□□□ -0.44
TRAV17-201ENST00000390445 DHX57Q6P158 1386 aaKnown RBP12.29□□□□□ -0.44
TRAV17-201ENST00000390445 ITSN1Q15811 1721 aa12.28□□□□□ -0.44
TRAV17-201ENST00000390445 DSG2Q14126 1118 aa12.28□□□□□ -0.44
TRAV17-201ENST00000390445 QTRT2Q9H974 415 aaKnown RBP12.28□□□□□ -0.44
TRAV17-201ENST00000390445 PPP1R15BQ5SWA1 713 aa12.27□□□□□ -0.45
TRAV17-201ENST00000390445 UPF1Q92900 1129 aaKnown RBP eCLIP12.27□□□□□ -0.45
TRAV17-201ENST00000390445 PRAM1Q96QH2 718 aa12.27□□□□□ -0.45
TRAV17-201ENST00000390445 ALS2Q96Q42 1657 aa12.26□□□□□ -0.45
TRAV17-201ENST00000390445 KIAA1210Q9ULL0 1709 aa12.26□□□□□ -0.45
TRAV17-201ENST00000390445 CRYBG1Q9Y4K1 1723 aa12.26□□□□□ -0.45
TRAV17-201ENST00000390445 KCNV2Q8TDN2 545 aa12.26□□□□□ -0.45
TRAV17-201ENST00000390445 DCAF11Q8TEB1 546 aa12.26□□□□□ -0.45
TRAV17-201ENST00000390445 OTUD5Q96G74 571 aa12.26□□□□□ -0.45
TRAV17-201ENST00000390445 RBM6P78332 1123 aaKnown RBP12.25□□□□□ -0.45
TRAV17-201ENST00000390445 SIRT1Q96EB6 747 aa12.25□□□□□ -0.45
TRAV17-201ENST00000390445 USP21Q9UK80 565 aa12.25□□□□□ -0.45
TRAV17-201ENST00000390445 TRAK1Q9UPV9 953 aa12.25□□□□□ -0.45
TRAV17-201ENST00000390445 NWD2Q9ULI1 1742 aa12.25□□□□□ -0.45
TRAV17-201ENST00000390445 ATRNO75882 1429 aa12.24□□□□□ -0.45
TRAV17-201ENST00000390445 FOXK1P85037 733 aa12.24□□□□□ -0.45
TRAV17-201ENST00000390445 BCL9LQ86UU0 1499 aa12.24□□□□□ -0.45
TRAV17-201ENST00000390445 HIRIP3Q9BW71 556 aaPredicted RBP12.24□□□□□ -0.45
TRAV17-201ENST00000390445 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.24□□□□□ -0.45
TRAV17-201ENST00000390445 NRAPQ86VF7 1730 aa12.23□□□□□ -0.45
TRAV17-201ENST00000390445 GLI3P10071 1580 aa12.23□□□□□ -0.45
TRAV17-201ENST00000390445 SPATA31A3Q5VYP0 1347 aa12.23□□□□□ -0.45
TRAV17-201ENST00000390445 E2F4Q16254 413 aa12.23□□□□□ -0.45
TRAV17-201ENST00000390445 KRT28Q7Z3Y7 464 aa12.23□□□□□ -0.45
TRAV17-201ENST00000390445 FNBP4Q8N3X1 1017 aaPredicted RBP12.23□□□□□ -0.45
TRAV17-201ENST00000390445 POGKQ9P215 609 aa12.23□□□□□ -0.45
TRAV17-201ENST00000390445 EP400Q96L91 3159 aa12.23□□□□□ -0.45
TRAV17-201ENST00000390445 TOPAZ1Q8N9V7 1692 aa12.22□□□□□ -0.45
TRAV17-201ENST00000390445 TNS3Q68CZ2 1445 aa12.22□□□□□ -0.45
TRAV17-201ENST00000390445 MINK1Q8N4C8 1332 aaPredicted RBP12.22□□□□□ -0.45
TRAV17-201ENST00000390445 PMFBP1Q8TBY8 1022 aa12.22□□□□□ -0.45
TRAV17-201ENST00000390445 TULP4Q9NRJ4 1543 aa12.21□□□□□ -0.45
TRAV17-201ENST00000390445 HRCP23327 699 aa12.21□□□□□ -0.45
TRAV17-201ENST00000390445 CABLES1Q8TDN4 633 aa12.21□□□□□ -0.45
TRAV17-201ENST00000390445 TRPC5Q9UL62 973 aaPredicted RBP12.21□□□□□ -0.45
TRAV17-201ENST00000390445 SLIT2O94813 1529 aa12.21□□□□□ -0.46
TRAV17-201ENST00000390445 ANKARQ7Z5J8 1434 aa12.2□□□□□ -0.46
TRAV17-201ENST00000390445 QRICH2Q9H0J4 1663 aa12.2□□□□□ -0.46
TRAV17-201ENST00000390445 PRR36Q9H6K5 1346 aa12.2□□□□□ -0.46
TRAV17-201ENST00000390445 CAMK2BQ13554 666 aa12.2□□□□□ -0.46
TRAV17-201ENST00000390445 PLPP6Q8IY26 295 aa12.2□□□□□ -0.46
TRAV17-201ENST00000390445 PHRF1Q9P1Y6 1649 aaKnown RBP12.19□□□□□ -0.46
TRAV17-201ENST00000390445 LMOD2Q6P5Q4 547 aa12.18□□□□□ -0.46
TRAV17-201ENST00000390445 SBNO1A3KN83 1393 aa12.18□□□□□ -0.46
TRAV17-201ENST00000390445 ATP7BP35670 1465 aa12.17□□□□□ -0.46
TRAV17-201ENST00000390445 RALGAPBQ86X10 1494 aa12.17□□□□□ -0.46
TRAV17-201ENST00000390445 PSME1Q06323 249 aa12.17□□□□□ -0.46
TRAV17-201ENST00000390445 COL14A1Q05707 1796 aaKnown RBP12.17□□□□□ -0.46
TRAV17-201ENST00000390445 TRPM1Q7Z4N2 1603 aa12.16□□□□□ -0.46
TRAV17-201ENST00000390445 WASLO00401 505 aaPredicted RBP12.16□□□□□ -0.46
TRAV17-201ENST00000390445 EMILIN3Q9NT22 766 aa12.16□□□□□ -0.46
TRAV17-201ENST00000390445 UNC5CLQ8IV45 518 aa12.15□□□□□ -0.46
TRAV17-201ENST00000390445 GJD4Q96KN9 370 aaPredicted RBP12.15□□□□□ -0.46
TRAV17-201ENST00000390445 SCUBE2Q9NQ36 999 aa12.15□□□□□ -0.46
TRAV17-201ENST00000390445 ARHGEF10O15013 1369 aa12.15□□□□□ -0.46
TRAV17-201ENST00000390445 ATAD2Q6PL18 1390 aa12.15□□□□□ -0.46
TRAV17-201ENST00000390445 NBPF1Q3BBV0 1214 aa12.14□□□□□ -0.47
TRAV17-201ENST00000390445 MAMSTRQ6ZN01 415 aa12.14□□□□□ -0.47
TRAV17-201ENST00000390445 STAC3Q96MF2 364 aa12.14□□□□□ -0.47
TRAV17-201ENST00000390445 SLAIN1Q8ND83 568 aa12.13□□□□□ -0.47
TRAV17-201ENST00000390445 EIF3AQ14152 1382 aaKnown RBP12.13□□□□□ -0.47
TRAV17-201ENST00000390445 GPRASP1Q5JY77 1395 aa12.12□□□□□ -0.47
TRAV17-201ENST00000390445 FAM83GA6ND36 823 aa12.11□□□□□ -0.47
TRAV17-201ENST00000390445 NGDNQ8NEJ9 315 aaKnown RBP12.11□□□□□ -0.47
TRAV17-201ENST00000390445 ARHGEF1Q92888 912 aaKnown RBP12.11□□□□□ -0.47
TRAV17-201ENST00000390445 NUDT16Q96DE0 195 aaKnown RBP12.11□□□□□ -0.47
TRAV17-201ENST00000390445 CDK19Q9BWU1 502 aa12.11□□□□□ -0.47
TRAV17-201ENST00000390445 AKAP12Q02952 1782 aa12.1□□□□□ -0.47
TRAV17-201ENST00000390445 RGPD5Q99666 1765 aa12.1□□□□□ -0.47
TRAV17-201ENST00000390445 SIN3AQ96ST3 1273 aa12.09□□□□□ -0.47
TRAV17-201ENST00000390445 CCDC9Q9Y3X0 531 aaKnown RBP12.09□□□□□ -0.47
TRAV17-201ENST00000390445 ARIH1Q9Y4X5 557 aaPredicted RBP12.09□□□□□ -0.47
TRAV17-201ENST00000390445 NRKQ7Z2Y5 1582 aa12.09□□□□□ -0.47
TRAV17-201ENST00000390445 THSD7AQ9UPZ6 1657 aa12.08□□□□□ -0.48
TRAV17-201ENST00000390445 VPS72Q15906 364 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms