RNA–Protein interactions for RNA: ENST00000390442.3

TRAV12-3-201, Transcript of T cell receptor alpha variable 12-3, humanhuman

APPRIS P1 BASIC

Gene TRAV12-3, Length 399 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3-201ENST00000390442 RASEFQ8IZ41 740 aa10.02□□□□□ -0.81
TRAV12-3-201ENST00000390442 NUDT16Q96DE0 195 aaKnown RBP10.02□□□□□ -0.81
TRAV12-3-201ENST00000390442 POLR3AO14802 1390 aaPredicted RBP10.01□□□□□ -0.81
TRAV12-3-201ENST00000390442 TNS3Q68CZ2 1445 aa10.01□□□□□ -0.81
TRAV12-3-201ENST00000390442 CHRM1P11229 460 aaPredicted RBP10.01□□□□□ -0.81
TRAV12-3-201ENST00000390442 BAG6P46379 1132 aa10.01□□□□□ -0.81
TRAV12-3-201ENST00000390442 MNX1P50219 401 aaPredicted RBP10.01□□□□□ -0.81
TRAV12-3-201ENST00000390442 VPS72Q15906 364 aa10.01□□□□□ -0.81
TRAV12-3-201ENST00000390442 KRT28Q7Z3Y7 464 aa10.01□□□□□ -0.81
TRAV12-3-201ENST00000390442 KRT27Q7Z3Y8 459 aa10.01□□□□□ -0.81
TRAV12-3-201ENST00000390442 PMFBP1Q8TBY8 1022 aa10.01□□□□□ -0.81
TRAV12-3-201ENST00000390442 FAM212AQ96EL1 285 aa10.01□□□□□ -0.81
TRAV12-3-201ENST00000390442 TESK2Q96S53 571 aa10.01□□□□□ -0.81
TRAV12-3-201ENST00000390442 CRYBG1Q9Y4K1 1723 aa10.01□□□□□ -0.81
TRAV12-3-201ENST00000390442 SBNO1A3KN83 1393 aa10.01□□□□□ -0.81
TRAV12-3-201ENST00000390442 ABCA3Q99758 1704 aa10□□□□□ -0.81
TRAV12-3-201ENST00000390442 PLEKHG3A1L390 1219 aa10□□□□□ -0.81
TRAV12-3-201ENST00000390442 KCNV2Q8TDN2 545 aa10□□□□□ -0.81
TRAV12-3-201ENST00000390442 CARD11Q9BXL7 1154 aa10□□□□□ -0.81
TRAV12-3-201ENST00000390442 EIF3AQ14152 1382 aaKnown RBP10□□□□□ -0.81
TRAV12-3-201ENST00000390442 CABLES1Q8TDN4 633 aa9.99□□□□□ -0.81
TRAV12-3-201ENST00000390442 AKT1S1Q96B36 256 aa9.99□□□□□ -0.81
TRAV12-3-201ENST00000390442 CABP2Q9NPB3 220 aa9.99□□□□□ -0.81
TRAV12-3-201ENST00000390442 WDR70Q9NW82 654 aa9.99□□□□□ -0.81
TRAV12-3-201ENST00000390442 CCDC61Q9Y6R9 512 aa9.99□□□□□ -0.81
TRAV12-3-201ENST00000390442 SSH2Q76I76 1423 aa9.99□□□□□ -0.81
TRAV12-3-201ENST00000390442 PSME1Q06323 249 aa9.98□□□□□ -0.81
TRAV12-3-201ENST00000390442 REM2Q8IYK8 340 aaPredicted RBP9.98□□□□□ -0.81
TRAV12-3-201ENST00000390442 RGPD1P0DJD0 1748 aa9.98□□□□□ -0.81
TRAV12-3-201ENST00000390442 ONECUT3O60422 494 aaPredicted RBP9.97□□□□□ -0.81
TRAV12-3-201ENST00000390442 PYGBP11216 843 aa9.97□□□□□ -0.81
TRAV12-3-201ENST00000390442 BCL11BQ9C0K0 894 aaPredicted RBP9.97□□□□□ -0.81
TRAV12-3-201ENST00000390442 STK24Q9Y6E0 443 aa9.97□□□□□ -0.81
TRAV12-3-201ENST00000390442 ARHGEF10O15013 1369 aa9.97□□□□□ -0.81
TRAV12-3-201ENST00000390442 CPSF1Q10570 1443 aaKnown RBP9.97□□□□□ -0.81
TRAV12-3-201ENST00000390442 CD163L1Q9NR16 1453 aa9.97□□□□□ -0.81
TRAV12-3-201ENST00000390442 NRAPQ86VF7 1730 aa9.96□□□□□ -0.81
TRAV12-3-201ENST00000390442 AKAP12Q02952 1782 aa9.96□□□□□ -0.81
TRAV12-3-201ENST00000390442 ST20-MTHFSA0A0A6YYL1 179 aa9.96□□□□□ -0.82
TRAV12-3-201ENST00000390442 FAM98CQ17RN3 349 aaKnown RBP9.96□□□□□ -0.82
TRAV12-3-201ENST00000390442 CCER1Q8TC90 406 aaPredicted RBP9.96□□□□□ -0.82
TRAV12-3-201ENST00000390442 ACEP12821 1306 aa9.96□□□□□ -0.82
TRAV12-3-201ENST00000390442 PPIP5K1Q6PFW1 1433 aa9.96□□□□□ -0.82
TRAV12-3-201ENST00000390442 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.95□□□□□ -0.82
TRAV12-3-201ENST00000390442 EN1Q05925 392 aaPredicted RBP9.95□□□□□ -0.82
TRAV12-3-201ENST00000390442 ZFP91Q96JP5 570 aaPredicted RBP9.95□□□□□ -0.82
TRAV12-3-201ENST00000390442 RBM42Q9BTD8 480 aaKnown RBP9.95□□□□□ -0.82
TRAV12-3-201ENST00000390442 CABP1Q9NZU7 370 aa9.95□□□□□ -0.82
TRAV12-3-201ENST00000390442 NRKQ7Z2Y5 1582 aa9.95□□□□□ -0.82
TRAV12-3-201ENST00000390442 USP47Q96K76 1375 aa9.94□□□□□ -0.82
TRAV12-3-201ENST00000390442 EVC2Q86UK5 1308 aa9.94□□□□□ -0.82
TRAV12-3-201ENST00000390442 FAM83GA6ND36 823 aa9.94□□□□□ -0.82
TRAV12-3-201ENST00000390442 R3HDM1Q15032 1099 aaKnown RBP9.94□□□□□ -0.82
TRAV12-3-201ENST00000390442 COL14A1Q05707 1796 aaKnown RBP9.93□□□□□ -0.82
TRAV12-3-201ENST00000390442 MON2Q7Z3U7 1717 aa9.93□□□□□ -0.82
TRAV12-3-201ENST00000390442 TNS1Q9HBL0 1735 aaKnown RBP9.93□□□□□ -0.82
TRAV12-3-201ENST00000390442 USP6P35125 1406 aa9.93□□□□□ -0.82
TRAV12-3-201ENST00000390442 SRPK2P78362 688 aaKnown RBP9.93□□□□□ -0.82
TRAV12-3-201ENST00000390442 NEUROD2Q15784 382 aa9.93□□□□□ -0.82
TRAV12-3-201ENST00000390442 FAM182BQ5T319 152 aa9.93□□□□□ -0.82
TRAV12-3-201ENST00000390442 PUS7Q96PZ0 661 aaKnown RBP9.93□□□□□ -0.82
TRAV12-3-201ENST00000390442 BTG4Q9NY30 223 aa9.93□□□□□ -0.82
TRAV12-3-201ENST00000390442 NGDNQ8NEJ9 315 aaKnown RBP9.92□□□□□ -0.82
TRAV12-3-201ENST00000390442 PIK3C2AO00443 1686 aa9.92□□□□□ -0.82
TRAV12-3-201ENST00000390442 PHRF1Q9P1Y6 1649 aaKnown RBP9.92□□□□□ -0.82
TRAV12-3-201ENST00000390442 DISP2A7MBM2 1401 aa9.91□□□□□ -0.82
TRAV12-3-201ENST00000390442 BRD4O60885 1362 aaPredicted RBP9.91□□□□□ -0.82
TRAV12-3-201ENST00000390442 ZC3H15Q8WU90 426 aaKnown RBP9.91□□□□□ -0.82
TRAV12-3-201ENST00000390442 PODXL2Q9NZ53 605 aa9.91□□□□□ -0.82
TRAV12-3-201ENST00000390442 THSD7AQ9UPZ6 1657 aa9.9□□□□□ -0.82
TRAV12-3-201ENST00000390442 USP19O94966 1318 aa9.9□□□□□ -0.82
TRAV12-3-201ENST00000390442 EZH2Q15910 746 aaKnown RBP9.9□□□□□ -0.82
TRAV12-3-201ENST00000390442 SLC12A5Q9H2X9 1139 aa9.9□□□□□ -0.82
TRAV12-3-201ENST00000390442 USP54Q70EL1 1684 aa9.9□□□□□ -0.83
TRAV12-3-201ENST00000390442 SPATA31A5Q5VU36 1347 aa9.89□□□□□ -0.83
TRAV12-3-201ENST00000390442 SPATA31A7Q8IWB4 1347 aa9.89□□□□□ -0.83
TRAV12-3-201ENST00000390442 SLIT3O75094 1523 aa9.89□□□□□ -0.83
TRAV12-3-201ENST00000390442 ARHGEF1Q92888 912 aaKnown RBP9.89□□□□□ -0.83
TRAV12-3-201ENST00000390442 MYOM1P52179 1685 aa9.89□□□□□ -0.83
TRAV12-3-201ENST00000390442 LMO7Q8WWI1 1683 aa9.88□□□□□ -0.83
TRAV12-3-201ENST00000390442 YY1P25490 414 aa9.88□□□□□ -0.83
TRAV12-3-201ENST00000390442 PRDM11Q9NQV5 511 aa9.88□□□□□ -0.83
TRAV12-3-201ENST00000390442 COL18A1P39060 1754 aa9.88□□□□□ -0.83
TRAV12-3-201ENST00000390442 A0A1W2PP64 1363 aa9.88□□□□□ -0.83
TRAV12-3-201ENST00000390442 TTC21BQ7Z4L5 1316 aa9.87□□□□□ -0.83
TRAV12-3-201ENST00000390442 C11orf95C9JLR9 678 aaPredicted RBP9.87□□□□□ -0.83
TRAV12-3-201ENST00000390442 PITPNM1O00562 1244 aa9.87□□□□□ -0.83
TRAV12-3-201ENST00000390442 TRIM37O94972 964 aa9.87□□□□□ -0.83
TRAV12-3-201ENST00000390442 PARD3Q8TEW0 1356 aa9.87□□□□□ -0.83
TRAV12-3-201ENST00000390442 PAK3O75914 559 aaPredicted RBP9.86□□□□□ -0.83
TRAV12-3-201ENST00000390442 APBA3O96018 575 aa9.86□□□□□ -0.83
TRAV12-3-201ENST00000390442 NUTM2GQ5VZR2 741 aa9.86□□□□□ -0.83
TRAV12-3-201ENST00000390442 CHADLQ6NUI6 762 aa9.86□□□□□ -0.83
TRAV12-3-201ENST00000390442 FAM196AQ6ZSG2 479 aa9.86□□□□□ -0.83
TRAV12-3-201ENST00000390442 CAMKK2Q96RR4 588 aa9.86□□□□□ -0.83
TRAV12-3-201ENST00000390442 RREB1Q92766 1687 aa9.86□□□□□ -0.83
TRAV12-3-201ENST00000390442 CPDO75976 1380 aa9.86□□□□□ -0.83
TRAV12-3-201ENST00000390442 USP31Q70CQ4 1352 aa9.86□□□□□ -0.83
TRAV12-3-201ENST00000390442 NUP188Q5SRE5 1749 aa9.85□□□□□ -0.83
TRAV12-3-201ENST00000390442 HSPA5P11021 654 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms