RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 ARHGAP31Q2M1Z3 1444 aa10.5□□□□□ -0.73
TRBV28-201ENST00000390400 RFC5P40937 340 aa10.5□□□□□ -0.73
TRBV28-201ENST00000390400 ZMYM3Q14202 1370 aa10.5□□□□□ -0.73
TRBV28-201ENST00000390400 NPATQ14207 1427 aa10.5□□□□□ -0.73
TRBV28-201ENST00000390400 PROSER2Q86WR7 435 aaPredicted RBP10.49□□□□□ -0.73
TRBV28-201ENST00000390400 SP7Q8TDD2 431 aaPredicted RBP10.49□□□□□ -0.73
TRBV28-201ENST00000390400 COG6Q9Y2V7 657 aa10.49□□□□□ -0.73
TRBV28-201ENST00000390400 CD46P15529 392 aa10.48□□□□□ -0.73
TRBV28-201ENST00000390400 RBM46Q8TBY0 533 aaKnown RBP10.48□□□□□ -0.73
TRBV28-201ENST00000390400 PODXL2Q9NZ53 605 aa10.48□□□□□ -0.73
TRBV28-201ENST00000390400 C3P01024 1663 aa10.47□□□□□ -0.73
TRBV28-201ENST00000390400 SPHKAPQ2M3C7 1700 aa10.47□□□□□ -0.73
TRBV28-201ENST00000390400 ERVK-7P63135 1459 aa10.47□□□□□ -0.73
TRBV28-201ENST00000390400 PREX1Q8TCU6 1659 aa10.47□□□□□ -0.73
TRBV28-201ENST00000390400 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.46□□□□□ -0.73
TRBV28-201ENST00000390400 DOK7Q18PE1 504 aa10.46□□□□□ -0.73
TRBV28-201ENST00000390400 NUDT18Q6ZVK8 323 aa10.46□□□□□ -0.73
TRBV28-201ENST00000390400 RIC3Q7Z5B4 369 aa10.46□□□□□ -0.73
TRBV28-201ENST00000390400 ANKRD30BQ9BXX2 1392 aa10.46□□□□□ -0.74
TRBV28-201ENST00000390400 PTPRTO14522 1441 aa10.46□□□□□ -0.74
TRBV28-201ENST00000390400 TRPM2O94759 1503 aa10.46□□□□□ -0.74
TRBV28-201ENST00000390400 SPATA31D1Q6ZQQ2 1576 aa10.45□□□□□ -0.74
TRBV28-201ENST00000390400 PTPRMP28827 1452 aa10.45□□□□□ -0.74
TRBV28-201ENST00000390400 NOS1P29475 1434 aa10.45□□□□□ -0.74
TRBV28-201ENST00000390400 MOXD2PA6NHM9 499 aa10.45□□□□□ -0.74
TRBV28-201ENST00000390400 PPP2R2DQ66LE6 453 aa10.45□□□□□ -0.74
TRBV28-201ENST00000390400 BCL2L12Q9HB09 334 aa10.45□□□□□ -0.74
TRBV28-201ENST00000390400 PLA2R1Q13018 1463 aa10.44□□□□□ -0.74
TRBV28-201ENST00000390400 TNRQ92752 1358 aa10.44□□□□□ -0.74
TRBV28-201ENST00000390400 SPDYE5A6NIY4 337 aa10.44□□□□□ -0.74
TRBV28-201ENST00000390400 SMAPO00193 183 aa10.44□□□□□ -0.74
TRBV28-201ENST00000390400 NDUFV2P19404 249 aa10.44□□□□□ -0.74
TRBV28-201ENST00000390400 CEBPAP49715 358 aaPredicted RBP10.44□□□□□ -0.74
TRBV28-201ENST00000390400 QPCTQ16769 361 aa10.44□□□□□ -0.74
TRBV28-201ENST00000390400 BCL11AQ9H165 835 aa10.44□□□□□ -0.74
TRBV28-201ENST00000390400 PCDHB15Q9Y5E8 787 aa10.44□□□□□ -0.74
TRBV28-201ENST00000390400 SYNMO15061 1565 aa10.43□□□□□ -0.74
TRBV28-201ENST00000390400 CCDC144AA2RUR9 1427 aa10.43□□□□□ -0.74
TRBV28-201ENST00000390400 SETD1BQ9UPS6 1966 aaKnown RBP10.43□□□□□ -0.74
TRBV28-201ENST00000390400 SPTLC1O15269 473 aa10.43□□□□□ -0.74
TRBV28-201ENST00000390400 MTMR14Q8NCE2 650 aa10.43□□□□□ -0.74
TRBV28-201ENST00000390400 ZSWIM6Q9HCJ5 1215 aa10.43□□□□□ -0.74
TRBV28-201ENST00000390400 DDX11L8A8MPP1 907 aa10.42□□□□□ -0.74
TRBV28-201ENST00000390400 RSBN1LQ6PCB5 846 aaPredicted RBP10.42□□□□□ -0.74
TRBV28-201ENST00000390400 BANK1Q8NDB2 785 aa10.42□□□□□ -0.74
TRBV28-201ENST00000390400 CLTCL1P53675 1640 aa10.41□□□□□ -0.74
TRBV28-201ENST00000390400 UGGT1Q9NYU2 1555 aa10.41□□□□□ -0.74
TRBV28-201ENST00000390400 CSPP1Q1MSJ5 1256 aa10.41□□□□□ -0.74
TRBV28-201ENST00000390400 PROX2Q3B8N5 592 aa10.41□□□□□ -0.74
TRBV28-201ENST00000390400 RTL5Q5HYW3 569 aaPredicted RBP10.41□□□□□ -0.74
TRBV28-201ENST00000390400 TATDN2Q93075 761 aa10.41□□□□□ -0.74
TRBV28-201ENST00000390400 SLC52A1Q9NWF4 448 aa10.41□□□□□ -0.74
TRBV28-201ENST00000390400 PIK3C2BO00750 1634 aa10.4□□□□□ -0.74
TRBV28-201ENST00000390400 PPP1R3GB7ZBB8 358 aa10.4□□□□□ -0.74
TRBV28-201ENST00000390400 TMEM134Q9H6X4 195 aa10.4□□□□□ -0.74
TRBV28-201ENST00000390400 PNMA3Q9UL41 463 aa10.4□□□□□ -0.74
TRBV28-201ENST00000390400 KIF1BO60333 1816 aa10.4□□□□□ -0.75
TRBV28-201ENST00000390400 NLRP1Q9C000 1473 aa10.39□□□□□ -0.75
TRBV28-201ENST00000390400 TRIM6-TRIM34B2RNG4 842 aa10.39□□□□□ -0.75
TRBV28-201ENST00000390400 PPP4R3BQ5MIZ7 849 aa10.39□□□□□ -0.75
TRBV28-201ENST00000390400 MYO3AQ8NEV4 1616 aa10.39□□□□□ -0.75
TRBV28-201ENST00000390400 LILRB3O75022 631 aa10.38□□□□□ -0.75
TRBV28-201ENST00000390400 DNAJB2P25686 324 aa10.38□□□□□ -0.75
TRBV28-201ENST00000390400 IDI1Q13907 227 aa10.38□□□□□ -0.75
TRBV28-201ENST00000390400 TUSC1Q2TAM9 212 aa10.38□□□□□ -0.75
TRBV28-201ENST00000390400 SIN3AQ96ST3 1273 aa10.38□□□□□ -0.75
TRBV28-201ENST00000390400 GDPD2Q9HCC8 539 aa10.38□□□□□ -0.75
TRBV28-201ENST00000390400 CABLES1Q8TDN4 633 aa10.37□□□□□ -0.75
TRBV28-201ENST00000390400 NECTIN2Q92692 538 aa10.37□□□□□ -0.75
TRBV28-201ENST00000390400 PLSCR2Q9NRY7 297 aa10.37□□□□□ -0.75
TRBV28-201ENST00000390400 ADGRB3O60242 1522 aa10.37□□□□□ -0.75
TRBV28-201ENST00000390400 MYO5BQ9ULV0 1848 aa10.36□□□□□ -0.75
TRBV28-201ENST00000390400 PTPREP23469 700 aa10.36□□□□□ -0.75
TRBV28-201ENST00000390400 DIXDC1Q155Q3 683 aa10.36□□□□□ -0.75
TRBV28-201ENST00000390400 TMEM259Q4ZIN3 620 aa10.36□□□□□ -0.75
TRBV28-201ENST00000390400 ZNF710Q8N1W2 664 aa10.36□□□□□ -0.75
TRBV28-201ENST00000390400 HLA-CQ95604 372 aa10.36□□□□□ -0.75
TRBV28-201ENST00000390400 SUPT16HQ9Y5B9 1047 aaKnown RBP10.36□□□□□ -0.75
TRBV28-201ENST00000390400 A2ML1A8K2U0 1454 aa10.36□□□□□ -0.75
TRBV28-201ENST00000390400 NEURL4Q96JN8 1562 aa10.35□□□□□ -0.75
TRBV28-201ENST00000390400 KDM5AP29375 1690 aaKnown RBP10.35□□□□□ -0.75
TRBV28-201ENST00000390400 ZNF142P52746 1687 aaPredicted RBP10.35□□□□□ -0.75
TRBV28-201ENST00000390400 UHRF1BP1Q6BDS2 1440 aa10.35□□□□□ -0.75
TRBV28-201ENST00000390400 SPATA31E1Q6ZUB1 1445 aa10.35□□□□□ -0.75
TRBV28-201ENST00000390400 RIMBP2O15034 1052 aa10.35□□□□□ -0.75
TRBV28-201ENST00000390400 RAD21O60216 631 aa10.35□□□□□ -0.75
TRBV28-201ENST00000390400 TMEM131LA2VDJ0 1609 aa10.35□□□□□ -0.75
TRBV28-201ENST00000390400 TONSLQ96HA7 1378 aa10.35□□□□□ -0.75
TRBV28-201ENST00000390400 CEP170BQ9Y4F5 1589 aaPredicted RBP10.35□□□□□ -0.75
TRBV28-201ENST00000390400 UBR1Q8IWV7 1749 aa10.34□□□□□ -0.75
TRBV28-201ENST00000390400 POM121CA8CG34 1229 aa10.33□□□□□ -0.76
TRBV28-201ENST00000390400 SLC10A3P09131 477 aa10.33□□□□□ -0.76
TRBV28-201ENST00000390400 GUCA2AQ02747 115 aa10.33□□□□□ -0.76
TRBV28-201ENST00000390400 RGL3Q3MIN7 710 aa10.33□□□□□ -0.76
TRBV28-201ENST00000390400 ZNF326Q5BKZ1 582 aaKnown RBP10.33□□□□□ -0.76
TRBV28-201ENST00000390400 NUTM1Q86Y26 1132 aa10.33□□□□□ -0.76
TRBV28-201ENST00000390400 NBPF26B4DH59 902 aa10.32□□□□□ -0.76
TRBV28-201ENST00000390400 HOXB1P14653 301 aaPredicted RBP10.32□□□□□ -0.76
TRBV28-201ENST00000390400 PCDHGC3Q9UN70 934 aa10.32□□□□□ -0.76
TRBV28-201ENST00000390400 TBC1D2BQ9UPU7 963 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms