RNA–Protein interactions for RNA: ENST00000389879.9

CCNK-201, Transcript of cyclin K, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCNK, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-201ENST00000389879 ATP7BP35670 1465 aa11.34□□□□□ -0.59
CCNK-201ENST00000389879 ABCC11Q96J66 1382 aa11.34□□□□□ -0.59
CCNK-201ENST00000389879 ESPNB1AK53 854 aa11.34□□□□□ -0.59
CCNK-201ENST00000389879 SSFA2P28290 1259 aa11.34□□□□□ -0.59
CCNK-201ENST00000389879 NOB1Q9ULX3 412 aaKnown RBP11.34□□□□□ -0.59
CCNK-201ENST00000389879 GGT6Q6P531 493 aa11.33□□□□□ -0.6
CCNK-201ENST00000389879 ANTXR1Q9H6X2 564 aa11.33□□□□□ -0.6
CCNK-201ENST00000389879 CABP2Q9NPB3 220 aa11.33□□□□□ -0.6
CCNK-201ENST00000389879 A2ML1A8K2U0 1454 aa11.33□□□□□ -0.6
CCNK-201ENST00000389879 CD2BP2O95400 341 aaKnown RBP11.33□□□□□ -0.6
CCNK-201ENST00000389879 PLCB2Q00722 1185 aa11.33□□□□□ -0.6
CCNK-201ENST00000389879 TNPO1Q92973 898 aaKnown RBP11.33□□□□□ -0.6
CCNK-201ENST00000389879 DDX49Q9Y6V7 483 aaKnown RBP11.33□□□□□ -0.6
CCNK-201ENST00000389879 ZKSCAN2Q63HK3 967 aa11.32□□□□□ -0.6
CCNK-201ENST00000389879 TMEM57Q8N5G2 664 aa11.32□□□□□ -0.6
CCNK-201ENST00000389879 PRDM10Q9NQV6 1147 aa11.32□□□□□ -0.6
CCNK-201ENST00000389879 NALCNQ8IZF0 1738 aa11.32□□□□□ -0.6
CCNK-201ENST00000389879 CCDC27Q2M243 656 aa11.32□□□□□ -0.6
CCNK-201ENST00000389879 SSH1Q8WYL5 1049 aa11.32□□□□□ -0.6
CCNK-201ENST00000389879 R3HCC1Q9Y3T6 440 aaKnown RBP11.32□□□□□ -0.6
CCNK-201ENST00000389879 NKTRP30414 1462 aaKnown RBP11.32□□□□□ -0.6
CCNK-201ENST00000389879 HMOX1P09601 288 aa11.31□□□□□ -0.6
CCNK-201ENST00000389879 VGFO15240 615 aaPredicted RBP11.31□□□□□ -0.6
CCNK-201ENST00000389879 PDE3AQ14432 1141 aa11.31□□□□□ -0.6
CCNK-201ENST00000389879 MCTP1Q6DN14 999 aa11.31□□□□□ -0.6
CCNK-201ENST00000389879 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.31□□□□□ -0.6
CCNK-201ENST00000389879 SIRT1Q96EB6 747 aa11.31□□□□□ -0.6
CCNK-201ENST00000389879 C3P01024 1663 aa11.31□□□□□ -0.6
CCNK-201ENST00000389879 SRPK2P78362 688 aaKnown RBP11.3□□□□□ -0.6
CCNK-201ENST00000389879 CAVIN1Q6NZI2 390 aaKnown RBP11.3□□□□□ -0.6
CCNK-201ENST00000389879 CNKSR2Q8WXI2 1034 aa11.3□□□□□ -0.6
CCNK-201ENST00000389879 TRIM27P14373 513 aa11.3□□□□□ -0.6
CCNK-201ENST00000389879 ANP32BQ92688 251 aaKnown RBP11.3□□□□□ -0.6
CCNK-201ENST00000389879 FAM135BQ49AJ0 1406 aa11.3□□□□□ -0.6
CCNK-201ENST00000389879 PNPLA6Q8IY17 1366 aa11.3□□□□□ -0.6
CCNK-201ENST00000389879 KIAA1211Q6ZU35 1233 aa11.3□□□□□ -0.6
CCNK-201ENST00000389879 RUNDC1Q96C34 613 aa11.3□□□□□ -0.6
CCNK-201ENST00000389879 RBM27Q9P2N5 1060 aaKnown RBP11.3□□□□□ -0.6
CCNK-201ENST00000389879 DIP2AQ14689 1571 aa11.29□□□□□ -0.6
CCNK-201ENST00000389879 FAM177BA6PVY3 158 aa11.29□□□□□ -0.6
CCNK-201ENST00000389879 CFAP53Q96M91 514 aa11.29□□□□□ -0.6
CCNK-201ENST00000389879 XPCQ01831 940 aaPredicted RBP11.29□□□□□ -0.6
CCNK-201ENST00000389879 MVPQ14764 893 aaKnown RBP11.29□□□□□ -0.6
CCNK-201ENST00000389879 ATAD2Q6PL18 1390 aa11.29□□□□□ -0.6
CCNK-201ENST00000389879 ZNF428Q96B54 188 aa11.29□□□□□ -0.6
CCNK-201ENST00000389879 YTHDC2Q9H6S0 1430 aaKnown RBP11.28□□□□□ -0.6
CCNK-201ENST00000389879 MRE11P49959 708 aa11.28□□□□□ -0.6
CCNK-201ENST00000389879 JARID2Q92833 1246 aaPredicted RBP11.28□□□□□ -0.6
CCNK-201ENST00000389879 RIPK4P57078 832 aa11.27□□□□□ -0.6
CCNK-201ENST00000389879 NSD3Q9BZ95 1437 aa11.27□□□□□ -0.61
CCNK-201ENST00000389879 ITSN1Q15811 1721 aa11.27□□□□□ -0.61
CCNK-201ENST00000389879 MSNP26038 577 aaKnown RBP11.27□□□□□ -0.61
CCNK-201ENST00000389879 PKP1Q13835 747 aa11.27□□□□□ -0.61
CCNK-201ENST00000389879 DNTTIP2Q5QJE6 756 aaKnown RBP11.27□□□□□ -0.61
CCNK-201ENST00000389879 TSC1Q92574 1164 aa11.27□□□□□ -0.61
CCNK-201ENST00000389879 NASPP49321 788 aaPredicted RBP11.26□□□□□ -0.61
CCNK-201ENST00000389879 C16orf71Q8IYS4 520 aaPredicted RBP11.26□□□□□ -0.61
CCNK-201ENST00000389879 MINK1Q8N4C8 1332 aaPredicted RBP11.26□□□□□ -0.61
CCNK-201ENST00000389879 CFAP65Q6ZU64 1925 aaKnown RBP11.26□□□□□ -0.61
CCNK-201ENST00000389879 NUTM2FA1L443 756 aa11.26□□□□□ -0.61
CCNK-201ENST00000389879 PTMAP06454 111 aaKnown RBP11.26□□□□□ -0.61
CCNK-201ENST00000389879 GAS2L2Q8NHY3 880 aa11.26□□□□□ -0.61
CCNK-201ENST00000389879 SLIT1O75093 1534 aa11.25□□□□□ -0.61
CCNK-201ENST00000389879 TSHZ3Q63HK5 1081 aa11.25□□□□□ -0.61
CCNK-201ENST00000389879 GBP4Q96PP9 640 aa11.25□□□□□ -0.61
CCNK-201ENST00000389879 EVC2Q86UK5 1308 aa11.25□□□□□ -0.61
CCNK-201ENST00000389879 SMARCA5O60264 1052 aaPredicted RBP11.25□□□□□ -0.61
CCNK-201ENST00000389879 PRPF40AO75400 957 aaKnown RBP11.25□□□□□ -0.61
CCNK-201ENST00000389879 DCTN1Q14203 1278 aa11.25□□□□□ -0.61
CCNK-201ENST00000389879 PPIP5K1Q6PFW1 1433 aa11.24□□□□□ -0.61
CCNK-201ENST00000389879 RGPD1P0DJD0 1748 aa11.24□□□□□ -0.61
CCNK-201ENST00000389879 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.24□□□□□ -0.61
CCNK-201ENST00000389879 LARP6Q9BRS8 491 aaKnown RBP11.24□□□□□ -0.61
CCNK-201ENST00000389879 CPSF1Q10570 1443 aaKnown RBP11.24□□□□□ -0.61
CCNK-201ENST00000389879 CLCN1P35523 988 aa11.24□□□□□ -0.61
CCNK-201ENST00000389879 FBXO3Q9UK99 471 aa11.24□□□□□ -0.61
CCNK-201ENST00000389879 DDX11L8A8MPP1 907 aa11.23□□□□□ -0.61
CCNK-201ENST00000389879 GDPD2Q9HCC8 539 aa11.23□□□□□ -0.61
CCNK-201ENST00000389879 ARHGAP23Q9P227 1491 aa11.23□□□□□ -0.61
CCNK-201ENST00000389879 GOLGA6L22H0YM25 854 aa11.22□□□□□ -0.61
CCNK-201ENST00000389879 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.22□□□□□ -0.61
CCNK-201ENST00000389879 OTUD7AQ8TE49 926 aaPredicted RBP11.22□□□□□ -0.61
CCNK-201ENST00000389879 NECTIN2Q92692 538 aa11.22□□□□□ -0.61
CCNK-201ENST00000389879 CT47B1P0C2W7 299 aaPredicted RBP11.22□□□□□ -0.61
CCNK-201ENST00000389879 ATF7IPQ6VMQ6 1270 aa11.22□□□□□ -0.61
CCNK-201ENST00000389879 ZNF830Q96NB3 372 aaPredicted RBP11.22□□□□□ -0.61
CCNK-201ENST00000389879 WDR63Q8IWG1 891 aa11.21□□□□□ -0.61
CCNK-201ENST00000389879 CALD1Q05682 793 aaKnown RBP11.21□□□□□ -0.62
CCNK-201ENST00000389879 TSPYL6Q8N831 410 aa11.21□□□□□ -0.62
CCNK-201ENST00000389879 TSPOAP1O95153 1857 aa11.21□□□□□ -0.62
CCNK-201ENST00000389879 XRN1Q8IZH2 1706 aaKnown RBP11.21□□□□□ -0.62
CCNK-201ENST00000389879 FSD2A1L4K1 749 aa11.21□□□□□ -0.62
CCNK-201ENST00000389879 IDI1Q13907 227 aa11.21□□□□□ -0.62
CCNK-201ENST00000389879 KRT24Q2M2I5 525 aa11.21□□□□□ -0.62
CCNK-201ENST00000389879 SLC4A10Q6U841 1118 aa11.21□□□□□ -0.62
CCNK-201ENST00000389879 ZGPATQ8N5A5 531 aaKnown RBP11.21□□□□□ -0.62
CCNK-201ENST00000389879 ZHX1Q9UKY1 873 aaPredicted RBP11.2□□□□□ -0.62
CCNK-201ENST00000389879 ZNF142P52746 1687 aaPredicted RBP11.2□□□□□ -0.62
CCNK-201ENST00000389879 AATKQ6ZMQ8 1374 aa11.2□□□□□ -0.62
CCNK-201ENST00000389879 TBC1D9Q6ZT07 1266 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms