RNA–Protein interactions for RNA: ENST00000389641.8

CCDC57-202, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC57, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-202ENST00000389641 THUMPD2Q9BTF0 503 aaKnown RBP16.5■□□□□ 0.23
CCDC57-202ENST00000389641 GGNBP2Q9H3C7 697 aa16.5■□□□□ 0.23
CCDC57-202ENST00000389641 OTUD7AQ8TE49 926 aaPredicted RBP16.5■□□□□ 0.23
CCDC57-202ENST00000389641 PLEKHF1Q96S99 279 aa16.49■□□□□ 0.23
CCDC57-202ENST00000389641 GDPD2Q9HCC8 539 aa16.49■□□□□ 0.23
CCDC57-202ENST00000389641 USP26Q9BXU7 913 aa16.49■□□□□ 0.23
CCDC57-202ENST00000389641 MCM5P33992 734 aa16.48■□□□□ 0.23
CCDC57-202ENST00000389641 PPP4R3BQ5MIZ7 849 aa16.48■□□□□ 0.23
CCDC57-202ENST00000389641 TTC12Q9H892 705 aaPredicted RBP16.48■□□□□ 0.23
CCDC57-202ENST00000389641 NOS1P29475 1434 aa16.48■□□□□ 0.23
CCDC57-202ENST00000389641 ATP2B3Q16720 1220 aa16.48■□□□□ 0.23
CCDC57-202ENST00000389641 MYRIPQ8NFW9 859 aa16.48■□□□□ 0.23
CCDC57-202ENST00000389641 ZCCHC11Q5TAX3 1644 aaKnown RBP16.48■□□□□ 0.23
CCDC57-202ENST00000389641 NUTM2DQ5VT03 806 aaPredicted RBP16.47■□□□□ 0.23
CCDC57-202ENST00000389641 PLEKHM2Q8IWE5 1019 aa16.47■□□□□ 0.23
CCDC57-202ENST00000389641 TSPYL6Q8N831 410 aa16.47■□□□□ 0.23
CCDC57-202ENST00000389641 DUOX2Q9NRD8 1548 aa16.47■□□□□ 0.23
CCDC57-202ENST00000389641 PLCB2Q00722 1185 aa16.46■□□□□ 0.23
CCDC57-202ENST00000389641 CABP2Q9NPB3 220 aa16.46■□□□□ 0.23
CCDC57-202ENST00000389641 STAC3Q96MF2 364 aa16.45■□□□□ 0.22
CCDC57-202ENST00000389641 SMARCA5O60264 1052 aaPredicted RBP16.45■□□□□ 0.22
CCDC57-202ENST00000389641 ST18O60284 1047 aa16.45■□□□□ 0.22
CCDC57-202ENST00000389641 TSPY26PQ9H489 355 aa16.45■□□□□ 0.22
CCDC57-202ENST00000389641 USP25Q9UHP3 1055 aa16.45■□□□□ 0.22
CCDC57-202ENST00000389641 BBXQ8WY36 941 aaPredicted RBP16.44■□□□□ 0.22
CCDC57-202ENST00000389641 CWC22Q9HCG8 908 aaKnown RBP16.44■□□□□ 0.22
CCDC57-202ENST00000389641 UGGT1Q9NYU2 1555 aa16.44■□□□□ 0.22
CCDC57-202ENST00000389641 UHRF1BP1LA0JNW5 1464 aa16.44■□□□□ 0.22
CCDC57-202ENST00000389641 FBLN1P23142 703 aa16.44■□□□□ 0.22
CCDC57-202ENST00000389641 NOLC1Q14978 699 aaKnown RBP eCLIP16.44■□□□□ 0.22
CCDC57-202ENST00000389641 CLTCL1P53675 1640 aa16.44■□□□□ 0.22
CCDC57-202ENST00000389641 PLCH2O75038 1416 aa16.43■□□□□ 0.22
CCDC57-202ENST00000389641 ABCC11Q96J66 1382 aa16.43■□□□□ 0.22
CCDC57-202ENST00000389641 SPHKAPQ2M3C7 1700 aa16.43■□□□□ 0.22
CCDC57-202ENST00000389641 GADD45BO75293 160 aaPredicted RBP16.43■□□□□ 0.22
CCDC57-202ENST00000389641 CFAP74Q9C0B2 1584 aa16.42■□□□□ 0.22
CCDC57-202ENST00000389641 ABCC1P33527 1531 aa16.42■□□□□ 0.22
CCDC57-202ENST00000389641 TTC22Q5TAA0 569 aa16.42■□□□□ 0.22
CCDC57-202ENST00000389641 GGT6Q6P531 493 aa16.42■□□□□ 0.22
CCDC57-202ENST00000389641 SDSP20132 328 aa16.42■□□□□ 0.22
CCDC57-202ENST00000389641 NEK4P51957 841 aa16.42■□□□□ 0.22
CCDC57-202ENST00000389641 UTP14CQ5TAP6 766 aaKnown RBP16.42■□□□□ 0.22
CCDC57-202ENST00000389641 ALDH1L2Q3SY69 923 aa16.41■□□□□ 0.22
CCDC57-202ENST00000389641 INTS3Q68E01 1043 aaKnown RBP16.41■□□□□ 0.22
CCDC57-202ENST00000389641 OSCARQ8IYS5 282 aa16.41■□□□□ 0.22
CCDC57-202ENST00000389641 BCL11BQ9C0K0 894 aaPredicted RBP16.41■□□□□ 0.22
CCDC57-202ENST00000389641 RAPGEF3O95398 923 aa16.4■□□□□ 0.22
CCDC57-202ENST00000389641 MRPL50Q8N5N7 158 aaKnown RBP16.4■□□□□ 0.22
CCDC57-202ENST00000389641 KIF3AQ9Y496 699 aa16.4■□□□□ 0.22
CCDC57-202ENST00000389641 VAMP4O75379 141 aa16.4■□□□□ 0.22
CCDC57-202ENST00000389641 BCL2L12Q9HB09 334 aa16.4■□□□□ 0.22
CCDC57-202ENST00000389641 TRPM2O94759 1503 aa16.39■□□□□ 0.21
CCDC57-202ENST00000389641 MBD3O95983 291 aa16.39■□□□□ 0.21
CCDC57-202ENST00000389641 TMX3Q96JJ7 454 aa16.39■□□□□ 0.21
CCDC57-202ENST00000389641 HMOX1P09601 288 aa16.38■□□□□ 0.21
CCDC57-202ENST00000389641 U2AF2P26368 475 aaKnown RBP eCLIP16.38■□□□□ 0.21
CCDC57-202ENST00000389641 CYB5RLQ6IPT4 315 aa16.38■□□□□ 0.21
CCDC57-202ENST00000389641 PIBF1Q8WXW3 757 aa16.38■□□□□ 0.21
CCDC57-202ENST00000389641 ARHGAP31Q2M1Z3 1444 aa16.38■□□□□ 0.21
CCDC57-202ENST00000389641 ADCY5O95622 1261 aa16.38■□□□□ 0.21
CCDC57-202ENST00000389641 NPM1P06748 294 aaKnown RBP eCLIP16.37■□□□□ 0.21
CCDC57-202ENST00000389641 ARAP3Q8WWN8 1544 aa16.37■□□□□ 0.21
CCDC57-202ENST00000389641 PRKAR2BP31323 418 aa16.37■□□□□ 0.21
CCDC57-202ENST00000389641 PRIMPOLQ96LW4 560 aa16.37■□□□□ 0.21
CCDC57-202ENST00000389641 IL16Q14005 1332 aa16.37■□□□□ 0.21
CCDC57-202ENST00000389641 ZBTB22O15209 634 aa16.36■□□□□ 0.21
CCDC57-202ENST00000389641 DIAPH1O60610 1272 aaKnown RBP16.36■□□□□ 0.21
CCDC57-202ENST00000389641 HCLS1P14317 486 aaPredicted RBP16.36■□□□□ 0.21
CCDC57-202ENST00000389641 TSHZ3Q63HK5 1081 aa16.36■□□□□ 0.21
CCDC57-202ENST00000389641 PDCL2Q8N4E4 241 aa16.36■□□□□ 0.21
CCDC57-202ENST00000389641 DTNBO60941 627 aa16.36■□□□□ 0.21
CCDC57-202ENST00000389641 HMGN5P82970 282 aaKnown RBP16.36■□□□□ 0.21
CCDC57-202ENST00000389641 DEPDC5O75140 1603 aa16.36■□□□□ 0.21
CCDC57-202ENST00000389641 ABCA6Q8N139 1617 aa16.36■□□□□ 0.21
CCDC57-202ENST00000389641 CFAP65Q6ZU64 1925 aaKnown RBP16.36■□□□□ 0.21
CCDC57-202ENST00000389641 ASXL2Q76L83 1435 aa16.36■□□□□ 0.21
CCDC57-202ENST00000389641 FANCAO15360 1455 aa16.36■□□□□ 0.21
CCDC57-202ENST00000389641 MAPK8IP2Q13387 824 aaPredicted RBP16.35■□□□□ 0.21
CCDC57-202ENST00000389641 CASC1Q6TDU7 716 aa16.35■□□□□ 0.21
CCDC57-202ENST00000389641 PHACTR3Q96KR7 559 aa16.35■□□□□ 0.21
CCDC57-202ENST00000389641 NCBP3Q53F19 620 aaKnown RBP16.35■□□□□ 0.21
CCDC57-202ENST00000389641 USP48Q86UV5 1035 aa16.35■□□□□ 0.21
CCDC57-202ENST00000389641 STK26Q9P289 416 aa16.35■□□□□ 0.21
CCDC57-202ENST00000389641 VGLL3A8MV65 326 aa16.34■□□□□ 0.21
CCDC57-202ENST00000389641 GTF2E1P29083 439 aaPredicted RBP16.34■□□□□ 0.21
CCDC57-202ENST00000389641 SRPK2P78362 688 aaKnown RBP16.34■□□□□ 0.21
CCDC57-202ENST00000389641 DCTPP1Q9H773 170 aa16.34■□□□□ 0.21
CCDC57-202ENST00000389641 SPC24Q8NBT2 197 aa16.34■□□□□ 0.21
CCDC57-202ENST00000389641 GTPBP4Q9BZE4 634 aaKnown RBP16.34■□□□□ 0.21
CCDC57-202ENST00000389641 CGNQ9P2M7 1197 aaKnown RBP16.34■□□□□ 0.21
CCDC57-202ENST00000389641 BRD1O95696 1058 aa16.33■□□□□ 0.21
CCDC57-202ENST00000389641 C8orf58Q8NAV2 365 aa16.33■□□□□ 0.21
CCDC57-202ENST00000389641 CHMP4BQ9H444 224 aaKnown RBP16.33■□□□□ 0.21
CCDC57-202ENST00000389641 SYAP1Q96A49 352 aaPredicted RBP16.33■□□□□ 0.2
CCDC57-202ENST00000389641 UPF3BQ9BZI7 483 aaKnown RBP16.33■□□□□ 0.2
CCDC57-202ENST00000389641 RIOK3O14730 519 aaKnown RBP16.32■□□□□ 0.2
CCDC57-202ENST00000389641 REC8O95072 547 aa16.32■□□□□ 0.2
CCDC57-202ENST00000389641 PDE4CQ08493 712 aa16.32■□□□□ 0.2
CCDC57-202ENST00000389641 TWISTNBQ3B726 338 aaPredicted RBP16.32■□□□□ 0.2
CCDC57-202ENST00000389641 ADGRB2O60241 1585 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms