RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 TBC1D32Q96NH3 1257 aa14.74□□□□□ -0.05
RAPGEF3-201ENST00000389212 MED14O60244 1454 aa14.74□□□□□ -0.05
RAPGEF3-201ENST00000389212 ZBTB40Q9NUA8 1239 aa14.74□□□□□ -0.05
RAPGEF3-201ENST00000389212 ANKRD26Q9UPS8 1709 aa14.74□□□□□ -0.05
RAPGEF3-201ENST00000389212 IL13P35225 146 aa14.73□□□□□ -0.05
RAPGEF3-201ENST00000389212 BECN1Q14457 450 aa14.73□□□□□ -0.05
RAPGEF3-201ENST00000389212 RRAGDQ9NQL2 400 aaPredicted RBP14.73□□□□□ -0.05
RAPGEF3-201ENST00000389212 KIF20BQ96Q89 1820 aa14.73□□□□□ -0.05
RAPGEF3-201ENST00000389212 TBC1D2Q9BYX2 928 aa14.73□□□□□ -0.05
RAPGEF3-201ENST00000389212 FAM135BQ49AJ0 1406 aa14.73□□□□□ -0.05
RAPGEF3-201ENST00000389212 KIF16BQ96L93 1317 aa14.73□□□□□ -0.05
RAPGEF3-201ENST00000389212 MAP2P11137 1827 aaKnown RBP14.73□□□□□ -0.05
RAPGEF3-201ENST00000389212 DIP2BQ9P265 1576 aa14.72□□□□□ -0.05
RAPGEF3-201ENST00000389212 IPO8O15397 1037 aaKnown RBP14.72□□□□□ -0.05
RAPGEF3-201ENST00000389212 COG3Q96JB2 828 aa14.72□□□□□ -0.05
RAPGEF3-201ENST00000389212 MBIPQ9NS73 344 aa14.72□□□□□ -0.05
RAPGEF3-201ENST00000389212 HDAC1Q13547 482 aaPredicted RBP14.72□□□□□ -0.05
RAPGEF3-201ENST00000389212 CHMP4BQ9H444 224 aaKnown RBP14.72□□□□□ -0.05
RAPGEF3-201ENST00000389212 VAMP4O75379 141 aa14.72□□□□□ -0.05
RAPGEF3-201ENST00000389212 AEBP1Q8IUX7 1158 aa14.72□□□□□ -0.05
RAPGEF3-201ENST00000389212 C8orf58Q8NAV2 365 aa14.7□□□□□ -0.06
RAPGEF3-201ENST00000389212 PRR36Q9H6K5 1346 aa14.7□□□□□ -0.06
RAPGEF3-201ENST00000389212 CPS1P31327 1500 aa14.7□□□□□ -0.06
RAPGEF3-201ENST00000389212 KRT24Q2M2I5 525 aa14.7□□□□□ -0.06
RAPGEF3-201ENST00000389212 CCDC61Q9Y6R9 512 aa14.7□□□□□ -0.06
RAPGEF3-201ENST00000389212 SMC5Q8IY18 1101 aa14.7□□□□□ -0.06
RAPGEF3-201ENST00000389212 ZMYM3Q14202 1370 aa14.7□□□□□ -0.06
RAPGEF3-201ENST00000389212 RIMBP3CA6NJZ7 1639 aa14.69□□□□□ -0.06
RAPGEF3-201ENST00000389212 RIMBP3BA6NNM3 1639 aa14.69□□□□□ -0.06
RAPGEF3-201ENST00000389212 ATP7BP35670 1465 aa14.69□□□□□ -0.06
RAPGEF3-201ENST00000389212 C22orf23Q9BZE7 217 aa14.69□□□□□ -0.06
RAPGEF3-201ENST00000389212 RIMBP3Q9UFD9 1639 aa14.69□□□□□ -0.06
RAPGEF3-201ENST00000389212 MRPL50Q8N5N7 158 aaKnown RBP14.69□□□□□ -0.06
RAPGEF3-201ENST00000389212 ALDH1L2Q3SY69 923 aa14.68□□□□□ -0.06
RAPGEF3-201ENST00000389212 ANKRD45Q5TZF3 282 aa14.68□□□□□ -0.06
RAPGEF3-201ENST00000389212 TWISTNBQ3B726 338 aaPredicted RBP14.68□□□□□ -0.06
RAPGEF3-201ENST00000389212 CPSF1Q10570 1443 aaKnown RBP14.68□□□□□ -0.06
RAPGEF3-201ENST00000389212 EDC4Q6P2E9 1401 aaKnown RBP14.68□□□□□ -0.06
RAPGEF3-201ENST00000389212 SPATA31D1Q6ZQQ2 1576 aa14.67□□□□□ -0.06
RAPGEF3-201ENST00000389212 CEBPAP49715 358 aaPredicted RBP14.67□□□□□ -0.06
RAPGEF3-201ENST00000389212 SLC26A8Q96RN1 970 aa14.67□□□□□ -0.06
RAPGEF3-201ENST00000389212 GNAI1P63096 354 aa14.67□□□□□ -0.06
RAPGEF3-201ENST00000389212 SULT6B1Q6IMI4 303 aa14.67□□□□□ -0.06
RAPGEF3-201ENST00000389212 ZBTB7BO15156 539 aaPredicted RBP14.66□□□□□ -0.06
RAPGEF3-201ENST00000389212 SETD1AO15047 1707 aaKnown RBP14.66□□□□□ -0.06
RAPGEF3-201ENST00000389212 CHD1LQ86WJ1 897 aa14.66□□□□□ -0.06
RAPGEF3-201ENST00000389212 DLC1Q96QB1 1528 aa14.66□□□□□ -0.06
RAPGEF3-201ENST00000389212 NRXN3Q9Y4C0 1643 aa14.66□□□□□ -0.06
RAPGEF3-201ENST00000389212 NUCB1Q02818 461 aa14.65□□□□□ -0.06
RAPGEF3-201ENST00000389212 MCM10Q7L590 875 aa14.65□□□□□ -0.06
RAPGEF3-201ENST00000389212 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.65□□□□□ -0.06
RAPGEF3-201ENST00000389212 ROBO2Q9HCK4 1378 aa14.65□□□□□ -0.06
RAPGEF3-201ENST00000389212 ANTXR1Q9H6X2 564 aa14.65□□□□□ -0.06
RAPGEF3-201ENST00000389212 IFT57Q9NWB7 429 aa14.65□□□□□ -0.06
RAPGEF3-201ENST00000389212 PPP6R1Q9UPN7 881 aa14.65□□□□□ -0.06
RAPGEF3-201ENST00000389212 SIRT2Q8IXJ6 389 aa14.64□□□□□ -0.07
RAPGEF3-201ENST00000389212 ZHX1Q9UKY1 873 aaPredicted RBP14.64□□□□□ -0.07
RAPGEF3-201ENST00000389212 AGLP35573 1532 aa14.64□□□□□ -0.07
RAPGEF3-201ENST00000389212 EIF4A2Q14240 407 aaKnown RBP14.64□□□□□ -0.07
RAPGEF3-201ENST00000389212 HSP90AB2PQ58FF8 381 aa14.64□□□□□ -0.07
RAPGEF3-201ENST00000389212 ZNF853P0CG23 659 aa14.63□□□□□ -0.07
RAPGEF3-201ENST00000389212 LTKP29376 864 aa14.63□□□□□ -0.07
RAPGEF3-201ENST00000389212 MIS18AQ9NYP9 233 aa14.63□□□□□ -0.07
RAPGEF3-201ENST00000389212 NAP1L2Q9ULW6 460 aaPredicted RBP14.63□□□□□ -0.07
RAPGEF3-201ENST00000389212 CDC42BPGQ6DT37 1551 aa14.63□□□□□ -0.07
RAPGEF3-201ENST00000389212 CFAP44Q96MT7 982 aa14.63□□□□□ -0.07
RAPGEF3-201ENST00000389212 ACEP12821 1306 aa14.63□□□□□ -0.07
RAPGEF3-201ENST00000389212 CALD1Q05682 793 aaKnown RBP14.62□□□□□ -0.07
RAPGEF3-201ENST00000389212 KLHL34Q8N239 644 aa14.62□□□□□ -0.07
RAPGEF3-201ENST00000389212 TNRQ92752 1358 aa14.62□□□□□ -0.07
RAPGEF3-201ENST00000389212 CDK12Q9NYV4 1490 aaPredicted RBP14.62□□□□□ -0.07
RAPGEF3-201ENST00000389212 APBB1O00213 710 aa14.61□□□□□ -0.07
RAPGEF3-201ENST00000389212 PLCD3Q8N3E9 789 aa14.61□□□□□ -0.07
RAPGEF3-201ENST00000389212 TTC21BQ7Z4L5 1316 aa14.61□□□□□ -0.07
RAPGEF3-201ENST00000389212 FOXO3O43524 673 aa14.6□□□□□ -0.07
RAPGEF3-201ENST00000389212 FOXD4L1Q9NU39 408 aa14.6□□□□□ -0.07
RAPGEF3-201ENST00000389212 AATKQ6ZMQ8 1374 aa14.6□□□□□ -0.07
RAPGEF3-201ENST00000389212 GZF1Q9H116 711 aaPredicted RBP14.59□□□□□ -0.07
RAPGEF3-201ENST00000389212 DLG5Q8TDM6 1919 aa14.59□□□□□ -0.07
RAPGEF3-201ENST00000389212 TMEM2Q9UHN6 1383 aa14.59□□□□□ -0.07
RAPGEF3-201ENST00000389212 ABCC4O15439 1325 aa14.59□□□□□ -0.07
RAPGEF3-201ENST00000389212 LMOD3Q0VAK6 560 aa14.59□□□□□ -0.07
RAPGEF3-201ENST00000389212 HDGFP51858 240 aaKnown RBP14.58□□□□□ -0.07
RAPGEF3-201ENST00000389212 REREQ9P2R6 1566 aa14.58□□□□□ -0.08
RAPGEF3-201ENST00000389212 ZNF692Q9BU19 519 aaPredicted RBP14.58□□□□□ -0.08
RAPGEF3-201ENST00000389212 PTCH1Q13635 1447 aa14.58□□□□□ -0.08
RAPGEF3-201ENST00000389212 BRPF1P55201 1214 aaPredicted RBP14.58□□□□□ -0.08
RAPGEF3-201ENST00000389212 NUTM2GQ5VZR2 741 aa14.58□□□□□ -0.08
RAPGEF3-201ENST00000389212 ZNF428Q96B54 188 aa14.58□□□□□ -0.08
RAPGEF3-201ENST00000389212 TAF7LQ5H9L4 462 aa14.57□□□□□ -0.08
RAPGEF3-201ENST00000389212 C16orf71Q8IYS4 520 aaPredicted RBP14.57□□□□□ -0.08
RAPGEF3-201ENST00000389212 MAPK8IP2Q13387 824 aaPredicted RBP14.57□□□□□ -0.08
RAPGEF3-201ENST00000389212 HSCBQ8IWL3 235 aa14.57□□□□□ -0.08
RAPGEF3-201ENST00000389212 ARHGAP45Q92619 1136 aa14.57□□□□□ -0.08
RAPGEF3-201ENST00000389212 RBM42Q9BTD8 480 aaKnown RBP14.56□□□□□ -0.08
RAPGEF3-201ENST00000389212 PRDM10Q9NQV6 1147 aa14.56□□□□□ -0.08
RAPGEF3-201ENST00000389212 ADAMTS13Q76LX8 1427 aa14.56□□□□□ -0.08
RAPGEF3-201ENST00000389212 API5Q9BZZ5 524 aaKnown RBP14.56□□□□□ -0.08
RAPGEF3-201ENST00000389212 TBC1D9Q6ZT07 1266 aa14.55□□□□□ -0.08
RAPGEF3-201ENST00000389212 OTUD7AQ8TE49 926 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms