RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 FCHSD2O94868 740 aa10.53□□□□□ -0.72
ERCC8-202ENST00000381118 GCP02774 474 aa10.53□□□□□ -0.72
ERCC8-202ENST00000381118 PDE3BQ13370 1112 aa10.53□□□□□ -0.72
ERCC8-202ENST00000381118 ZNF521Q96K83 1311 aa10.53□□□□□ -0.72
ERCC8-202ENST00000381118 NEFMP07197 916 aa10.52□□□□□ -0.73
ERCC8-202ENST00000381118 GOLGA2Q08379 1002 aa10.52□□□□□ -0.73
ERCC8-202ENST00000381118 TNS3Q68CZ2 1445 aa10.52□□□□□ -0.73
ERCC8-202ENST00000381118 SULT6B1Q6IMI4 303 aa10.52□□□□□ -0.73
ERCC8-202ENST00000381118 AEBP1Q8IUX7 1158 aa10.52□□□□□ -0.73
ERCC8-202ENST00000381118 WWC1Q8IX03 1113 aa10.52□□□□□ -0.73
ERCC8-202ENST00000381118 CABLES1Q8TDN4 633 aa10.52□□□□□ -0.73
ERCC8-202ENST00000381118 RGPD5Q99666 1765 aa10.52□□□□□ -0.73
ERCC8-202ENST00000381118 DLG5Q8TDM6 1919 aa10.52□□□□□ -0.73
ERCC8-202ENST00000381118 RGPD1P0DJD0 1748 aa10.52□□□□□ -0.73
ERCC8-202ENST00000381118 MED1Q15648 1581 aaPredicted RBP10.52□□□□□ -0.73
ERCC8-202ENST00000381118 SLIT3O75094 1523 aa10.52□□□□□ -0.73
ERCC8-202ENST00000381118 PNNQ9H307 717 aaKnown RBP10.52□□□□□ -0.73
ERCC8-202ENST00000381118 RGPD2P0DJD1 1756 aa10.51□□□□□ -0.73
ERCC8-202ENST00000381118 PHRF1Q9P1Y6 1649 aaKnown RBP10.51□□□□□ -0.73
ERCC8-202ENST00000381118 TMPOP42166 694 aaKnown RBP10.51□□□□□ -0.73
ERCC8-202ENST00000381118 PHACTR3Q96KR7 559 aa10.51□□□□□ -0.73
ERCC8-202ENST00000381118 SPINK5Q9NQ38 1064 aaPredicted RBP10.51□□□□□ -0.73
ERCC8-202ENST00000381118 USP19O94966 1318 aa10.5□□□□□ -0.73
ERCC8-202ENST00000381118 ZC3H6P61129 1189 aaKnown RBP10.5□□□□□ -0.73
ERCC8-202ENST00000381118 IRX6P78412 446 aaPredicted RBP10.5□□□□□ -0.73
ERCC8-202ENST00000381118 ROBO1Q9Y6N7 1651 aa10.5□□□□□ -0.73
ERCC8-202ENST00000381118 SPATA31A3Q5VYP0 1347 aa10.5□□□□□ -0.73
ERCC8-202ENST00000381118 NHSL1Q5SYE7 1610 aa10.5□□□□□ -0.73
ERCC8-202ENST00000381118 RIPK4P57078 832 aa10.5□□□□□ -0.73
ERCC8-202ENST00000381118 NEFLP07196 543 aa10.49□□□□□ -0.73
ERCC8-202ENST00000381118 FKBP8Q14318 412 aa10.49□□□□□ -0.73
ERCC8-202ENST00000381118 CRYBG1Q9Y4K1 1723 aa10.49□□□□□ -0.73
ERCC8-202ENST00000381118 RTL1A6NKG5 1358 aa10.49□□□□□ -0.73
ERCC8-202ENST00000381118 KIF24Q5T7B8 1368 aa10.49□□□□□ -0.73
ERCC8-202ENST00000381118 NGEFQ8N5V2 710 aa10.49□□□□□ -0.73
ERCC8-202ENST00000381118 IP6K1Q92551 441 aa10.49□□□□□ -0.73
ERCC8-202ENST00000381118 EYA1Q99502 592 aa10.49□□□□□ -0.73
ERCC8-202ENST00000381118 SOS2Q07890 1332 aaPredicted RBP10.48□□□□□ -0.73
ERCC8-202ENST00000381118 SLFN5Q08AF3 891 aa10.48□□□□□ -0.73
ERCC8-202ENST00000381118 DUSP27Q5VZP5 1158 aa10.48□□□□□ -0.73
ERCC8-202ENST00000381118 ARHGEF25Q86VW2 580 aa10.48□□□□□ -0.73
ERCC8-202ENST00000381118 USHBP1Q8N6Y0 703 aa10.48□□□□□ -0.73
ERCC8-202ENST00000381118 ARHGEF10O15013 1369 aa10.48□□□□□ -0.73
ERCC8-202ENST00000381118 TRIM35Q9UPQ4 493 aa10.48□□□□□ -0.73
ERCC8-202ENST00000381118 CCDC27Q2M243 656 aa10.47□□□□□ -0.73
ERCC8-202ENST00000381118 AXIN2Q9Y2T1 843 aa10.47□□□□□ -0.73
ERCC8-202ENST00000381118 IGSF1Q8N6C5 1336 aa10.47□□□□□ -0.73
ERCC8-202ENST00000381118 E9PSI1 815 aa10.46□□□□□ -0.73
ERCC8-202ENST00000381118 HAP1P54257 671 aaPredicted RBP10.46□□□□□ -0.73
ERCC8-202ENST00000381118 PIAS4Q8N2W9 510 aaPredicted RBP10.46□□□□□ -0.73
ERCC8-202ENST00000381118 LRRC59Q96AG4 307 aaKnown RBP10.46□□□□□ -0.73
ERCC8-202ENST00000381118 CHRNA2Q15822 529 aa10.46□□□□□ -0.74
ERCC8-202ENST00000381118 NFE2L2Q16236 605 aa10.46□□□□□ -0.74
ERCC8-202ENST00000381118 RCAN3Q9UKA8 241 aa10.46□□□□□ -0.74
ERCC8-202ENST00000381118 PIP4K2BP78356 416 aa10.45□□□□□ -0.74
ERCC8-202ENST00000381118 ABCA3Q99758 1704 aa10.45□□□□□ -0.74
ERCC8-202ENST00000381118 FAM83GA6ND36 823 aa10.45□□□□□ -0.74
ERCC8-202ENST00000381118 NBPF6Q5VWK0 638 aa10.45□□□□□ -0.74
ERCC8-202ENST00000381118 WDR63Q8IWG1 891 aa10.45□□□□□ -0.74
ERCC8-202ENST00000381118 ANKRD24Q8TF21 1146 aa10.45□□□□□ -0.74
ERCC8-202ENST00000381118 NBPF4Q96M43 638 aa10.45□□□□□ -0.74
ERCC8-202ENST00000381118 THUMPD2Q9BTF0 503 aaKnown RBP10.45□□□□□ -0.74
ERCC8-202ENST00000381118 KDRP35968 1356 aa10.44□□□□□ -0.74
ERCC8-202ENST00000381118 KIAA0232Q92628 1395 aa10.44□□□□□ -0.74
ERCC8-202ENST00000381118 TRMT2AQ8IZ69 625 aaKnown RBP10.44□□□□□ -0.74
ERCC8-202ENST00000381118 DCTN1Q14203 1278 aa10.43□□□□□ -0.74
ERCC8-202ENST00000381118 TSR2Q969E8 191 aaKnown RBP10.43□□□□□ -0.74
ERCC8-202ENST00000381118 LAS1LQ9Y4W2 734 aaKnown RBP10.43□□□□□ -0.74
ERCC8-202ENST00000381118 COL18A1P39060 1754 aa10.43□□□□□ -0.74
ERCC8-202ENST00000381118 PHLPP1O60346 1717 aa10.42□□□□□ -0.74
ERCC8-202ENST00000381118 MTHFSDQ2M296 383 aaKnown RBP10.42□□□□□ -0.74
ERCC8-202ENST00000381118 NCBP3Q53F19 620 aaKnown RBP10.42□□□□□ -0.74
ERCC8-202ENST00000381118 ERBB3P21860 1342 aa10.42□□□□□ -0.74
ERCC8-202ENST00000381118 PRDM11Q9NQV5 511 aa10.42□□□□□ -0.74
ERCC8-202ENST00000381118 AHDC1Q5TGY3 1603 aaPredicted RBP10.41□□□□□ -0.74
ERCC8-202ENST00000381118 TOM1O60784 492 aa10.41□□□□□ -0.74
ERCC8-202ENST00000381118 CSB-PGBD3P0DP91 1061 aa10.41□□□□□ -0.74
ERCC8-202ENST00000381118 MYH16Q9H6N6 1097 aa10.41□□□□□ -0.74
ERCC8-202ENST00000381118 FANCIQ9NVI1 1328 aa10.41□□□□□ -0.74
ERCC8-202ENST00000381118 PLIN1O60240 522 aa10.41□□□□□ -0.74
ERCC8-202ENST00000381118 RRP1P56182 461 aaKnown RBP10.41□□□□□ -0.74
ERCC8-202ENST00000381118 MCM10Q7L590 875 aa10.41□□□□□ -0.74
ERCC8-202ENST00000381118 UBAP1LF5GYI3 381 aa10.4□□□□□ -0.74
ERCC8-202ENST00000381118 LMOD3Q0VAK6 560 aa10.4□□□□□ -0.74
ERCC8-202ENST00000381118 NLRP2Q9NX02 1062 aa10.39□□□□□ -0.75
ERCC8-202ENST00000381118 CPDO75976 1380 aa10.39□□□□□ -0.75
ERCC8-202ENST00000381118 CAMTA1Q9Y6Y1 1673 aa10.39□□□□□ -0.75
ERCC8-202ENST00000381118 GAS2L2Q8NHY3 880 aa10.39□□□□□ -0.75
ERCC8-202ENST00000381118 VIRMAQ69YN4 1812 aaKnown RBP10.39□□□□□ -0.75
ERCC8-202ENST00000381118 RNF123Q5XPI4 1314 aa10.39□□□□□ -0.75
ERCC8-202ENST00000381118 EXOSC9Q06265 439 aaKnown RBP10.38□□□□□ -0.75
ERCC8-202ENST00000381118 RTF1Q92541 710 aaKnown RBP10.38□□□□□ -0.75
ERCC8-202ENST00000381118 COL16A1Q07092 1604 aaPredicted RBP10.38□□□□□ -0.75
ERCC8-202ENST00000381118 FAM208AQ9UK61 1670 aaKnown RBP10.38□□□□□ -0.75
ERCC8-202ENST00000381118 BCAR3O75815 825 aa10.38□□□□□ -0.75
ERCC8-202ENST00000381118 IL16Q14005 1332 aa10.38□□□□□ -0.75
ERCC8-202ENST00000381118 LMO7Q8WWI1 1683 aa10.37□□□□□ -0.75
ERCC8-202ENST00000381118 CALD1Q05682 793 aaKnown RBP10.37□□□□□ -0.75
ERCC8-202ENST00000381118 BCL2L13Q9BXK5 485 aa10.37□□□□□ -0.75
ERCC8-202ENST00000381118 ABCC6O95255 1503 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 373.6 ms