RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 MYL6BP14649 208 aa14.94□□□□□ -0.02
GABPB1-203ENST00000380877 HSP90AB2PQ58FF8 381 aa14.94□□□□□ -0.02
GABPB1-203ENST00000380877 CHD1O14646 1710 aa14.94□□□□□ -0.02
GABPB1-203ENST00000380877 AMOTQ4VCS5 1084 aa14.94□□□□□ -0.02
GABPB1-203ENST00000380877 RTN4Q9NQC3 1192 aaKnown RBP14.94□□□□□ -0.02
GABPB1-203ENST00000380877 SAMD9LQ8IVG5 1584 aa14.94□□□□□ -0.02
GABPB1-203ENST00000380877 TTC21AQ8NDW8 1320 aa14.94□□□□□ -0.02
GABPB1-203ENST00000380877 RNF20Q5VTR2 975 aa14.94□□□□□ -0.02
GABPB1-203ENST00000380877 DDX11L8A8MPP1 907 aa14.93□□□□□ -0.02
GABPB1-203ENST00000380877 CADPS2Q86UW7 1296 aa14.93□□□□□ -0.02
GABPB1-203ENST00000380877 POLR3AO14802 1390 aaPredicted RBP14.93□□□□□ -0.02
GABPB1-203ENST00000380877 LRPPRCP42704 1394 aaKnown RBP14.93□□□□□ -0.02
GABPB1-203ENST00000380877 GOLGA6L6A8MZA4 724 aa14.92□□□□□ -0.02
GABPB1-203ENST00000380877 CSPP1Q1MSJ5 1256 aa14.92□□□□□ -0.02
GABPB1-203ENST00000380877 KIF6Q6ZMV9 814 aa14.92□□□□□ -0.02
GABPB1-203ENST00000380877 RPAP2Q8IXW5 612 aaPredicted RBP14.92□□□□□ -0.02
GABPB1-203ENST00000380877 POLKQ9UBT6 870 aa14.92□□□□□ -0.02
GABPB1-203ENST00000380877 ZRANB1Q9UGI0 708 aa14.92□□□□□ -0.02
GABPB1-203ENST00000380877 NPATQ14207 1427 aa14.92□□□□□ -0.02
GABPB1-203ENST00000380877 CHD1LQ86WJ1 897 aa14.92□□□□□ -0.02
GABPB1-203ENST00000380877 CHMP5Q9NZZ3 219 aa14.92□□□□□ -0.02
GABPB1-203ENST00000380877 KDM6BO15054 1643 aa14.92□□□□□ -0.02
GABPB1-203ENST00000380877 A0A1W2PP64 1363 aa14.92□□□□□ -0.02
GABPB1-203ENST00000380877 TTC37Q6PGP7 1564 aa14.91□□□□□ -0.02
GABPB1-203ENST00000380877 TBX22Q9Y458 520 aa14.91□□□□□ -0.02
GABPB1-203ENST00000380877 FAM83GA6ND36 823 aa14.91□□□□□ -0.02
GABPB1-203ENST00000380877 CNTROBQ8N137 903 aa14.91□□□□□ -0.02
GABPB1-203ENST00000380877 GOLGA6L3A6NEY3 463 aa14.91□□□□□ -0.02
GABPB1-203ENST00000380877 NRDCO43847 1150 aa14.91□□□□□ -0.02
GABPB1-203ENST00000380877 VPS37DQ86XT2 251 aa14.91□□□□□ -0.02
GABPB1-203ENST00000380877 LRRCC1Q9C099 1032 aa14.91□□□□□ -0.02
GABPB1-203ENST00000380877 APPP05067 770 aa14.91□□□□□ -0.02
GABPB1-203ENST00000380877 MPRIPQ6WCQ1 1025 aa14.91□□□□□ -0.02
GABPB1-203ENST00000380877 ERC1Q8IUD2 1116 aa14.91□□□□□ -0.02
GABPB1-203ENST00000380877 FOXD4L6Q3SYB3 417 aaPredicted RBP14.9□□□□□ -0.02
GABPB1-203ENST00000380877 FOXD4L3Q6VB84 417 aaPredicted RBP14.9□□□□□ -0.02
GABPB1-203ENST00000380877 FAM184AQ8NB25 1140 aa14.9□□□□□ -0.02
GABPB1-203ENST00000380877 IL16Q14005 1332 aa14.9□□□□□ -0.02
GABPB1-203ENST00000380877 YEATS2Q9ULM3 1422 aa14.9□□□□□ -0.02
GABPB1-203ENST00000380877 FAM177BA6PVY3 158 aa14.9□□□□□ -0.02
GABPB1-203ENST00000380877 TRIM27P14373 513 aa14.9□□□□□ -0.02
GABPB1-203ENST00000380877 SRGAP3O43295 1099 aa14.9□□□□□ -0.02
GABPB1-203ENST00000380877 KCNA6P17658 529 aa14.9□□□□□ -0.02
GABPB1-203ENST00000380877 PIK3C2GO75747 1445 aa14.9□□□□□ -0.02
GABPB1-203ENST00000380877 PIP4K2BP78356 416 aa14.9□□□□□ -0.02
GABPB1-203ENST00000380877 CHMP4CQ96CF2 233 aa14.9□□□□□ -0.02
GABPB1-203ENST00000380877 FSD1Q9BTV5 496 aa14.9□□□□□ -0.02
GABPB1-203ENST00000380877 CFAP65Q6ZU64 1925 aaKnown RBP14.89□□□□□ -0.03
GABPB1-203ENST00000380877 TULP1O00294 542 aaPredicted RBP14.89□□□□□ -0.03
GABPB1-203ENST00000380877 NCKAP5LQ9HCH0 1330 aa14.89□□□□□ -0.03
GABPB1-203ENST00000380877 ATP6V1DQ9Y5K8 247 aa14.89□□□□□ -0.03
GABPB1-203ENST00000380877 DDX49Q9Y6V7 483 aaKnown RBP14.89□□□□□ -0.03
GABPB1-203ENST00000380877 ERCC6L2Q5T890 1561 aa14.89□□□□□ -0.03
GABPB1-203ENST00000380877 H3BQV1 296 aa14.89□□□□□ -0.03
GABPB1-203ENST00000380877 IFFO2Q5TF58 517 aa14.89□□□□□ -0.03
GABPB1-203ENST00000380877 ABCC1P33527 1531 aa14.88□□□□□ -0.03
GABPB1-203ENST00000380877 MBIPQ9NS73 344 aa14.88□□□□□ -0.03
GABPB1-203ENST00000380877 DRC7Q8IY82 874 aa14.87□□□□□ -0.03
GABPB1-203ENST00000380877 SIL1Q9H173 461 aa14.87□□□□□ -0.03
GABPB1-203ENST00000380877 PTCD1O75127 700 aaKnown RBP14.86□□□□□ -0.03
GABPB1-203ENST00000380877 WASHC4Q2M389 1173 aa14.86□□□□□ -0.03
GABPB1-203ENST00000380877 CPLX2Q6PUV4 134 aaKnown RBP14.86□□□□□ -0.03
GABPB1-203ENST00000380877 AEBP1Q8IUX7 1158 aa14.86□□□□□ -0.03
GABPB1-203ENST00000380877 F6X3S4 739 aa14.86□□□□□ -0.03
GABPB1-203ENST00000380877 EIF4A2Q14240 407 aaKnown RBP14.86□□□□□ -0.03
GABPB1-203ENST00000380877 CCDC27Q2M243 656 aa14.86□□□□□ -0.03
GABPB1-203ENST00000380877 MSNP26038 577 aaKnown RBP14.86□□□□□ -0.03
GABPB1-203ENST00000380877 TRDNQ13061 729 aa14.86□□□□□ -0.03
GABPB1-203ENST00000380877 SF3A1Q15459 793 aaKnown RBP14.86□□□□□ -0.03
GABPB1-203ENST00000380877 NPC1L1Q9UHC9 1359 aa14.86□□□□□ -0.03
GABPB1-203ENST00000380877 PREX2Q70Z35 1606 aa14.86□□□□□ -0.03
GABPB1-203ENST00000380877 SKAP1Q86WV1 359 aa14.85□□□□□ -0.03
GABPB1-203ENST00000380877 ANKRD24Q8TF21 1146 aa14.85□□□□□ -0.03
GABPB1-203ENST00000380877 EXOC6BQ9Y2D4 811 aa14.85□□□□□ -0.03
GABPB1-203ENST00000380877 SPATA31E1Q6ZUB1 1445 aa14.85□□□□□ -0.03
GABPB1-203ENST00000380877 ZCCHC11Q5TAX3 1644 aaKnown RBP14.85□□□□□ -0.03
GABPB1-203ENST00000380877 ZFYVE16Q7Z3T8 1539 aa14.85□□□□□ -0.03
GABPB1-203ENST00000380877 SYNE3Q6ZMZ3 975 aa14.85□□□□□ -0.03
GABPB1-203ENST00000380877 DNAJC2Q99543 621 aaKnown RBP14.85□□□□□ -0.03
GABPB1-203ENST00000380877 IL1RAPL2Q9NP60 686 aa14.85□□□□□ -0.03
GABPB1-203ENST00000380877 CHRNA2Q15822 529 aa14.84□□□□□ -0.03
GABPB1-203ENST00000380877 SKOR2Q2VWA4 1001 aaPredicted RBP14.83□□□□□ -0.03
GABPB1-203ENST00000380877 MSH6P52701 1360 aa14.83□□□□□ -0.03
GABPB1-203ENST00000380877 NUCB2P80303 420 aa14.83□□□□□ -0.04
GABPB1-203ENST00000380877 NOL10Q9BSC4 688 aaKnown RBP14.83□□□□□ -0.04
GABPB1-203ENST00000380877 CPLX1O14810 134 aa14.83□□□□□ -0.04
GABPB1-203ENST00000380877 FLIIQ13045 1269 aa14.83□□□□□ -0.04
GABPB1-203ENST00000380877 CCDC34Q96HJ3 373 aa14.83□□□□□ -0.04
GABPB1-203ENST00000380877 NAP1L5Q96NT1 182 aaPredicted RBP14.83□□□□□ -0.04
GABPB1-203ENST00000380877 SMC3Q9UQE7 1217 aa14.83□□□□□ -0.04
GABPB1-203ENST00000380877 DMRT2Q9Y5R5 561 aa14.83□□□□□ -0.04
GABPB1-203ENST00000380877 PLEKHH1Q9ULM0 1364 aa14.83□□□□□ -0.04
GABPB1-203ENST00000380877 PHF14O94880 888 aa14.83□□□□□ -0.04
GABPB1-203ENST00000380877 NEK4P51957 841 aa14.83□□□□□ -0.04
GABPB1-203ENST00000380877 NPHP3Q7Z494 1330 aa14.83□□□□□ -0.04
GABPB1-203ENST00000380877 MLH3Q9UHC1 1453 aa14.83□□□□□ -0.04
GABPB1-203ENST00000380877 MCTP1Q6DN14 999 aa14.82□□□□□ -0.04
GABPB1-203ENST00000380877 C19orf44Q9H6X5 657 aa14.82□□□□□ -0.04
GABPB1-203ENST00000380877 DBF4Q9UBU7 674 aaPredicted RBP14.82□□□□□ -0.04
GABPB1-203ENST00000380877 CFAP74Q9C0B2 1584 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms