RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 MEX3CQ5U5Q3 659 aaKnown RBP15.29■□□□□ 0.04
DNMT3A-204ENST00000380756 MTERF4Q7Z6M4 381 aaKnown RBP15.29■□□□□ 0.04
DNMT3A-204ENST00000380756 THEMISQ8N1K5 641 aaPredicted RBP15.29■□□□□ 0.04
DNMT3A-204ENST00000380756 SPINK5Q9NQ38 1064 aaPredicted RBP15.29■□□□□ 0.04
DNMT3A-204ENST00000380756 EMILIN1Q9Y6C2 1016 aa15.29■□□□□ 0.04
DNMT3A-204ENST00000380756 SSFA2P28290 1259 aa15.29■□□□□ 0.04
DNMT3A-204ENST00000380756 ZSCAN30Q86W11 494 aa15.29■□□□□ 0.04
DNMT3A-204ENST00000380756 RLBP1P12271 317 aa15.28■□□□□ 0.04
DNMT3A-204ENST00000380756 IL1RAPL2Q9NP60 686 aa15.28■□□□□ 0.04
DNMT3A-204ENST00000380756 DNMT1P26358 1616 aaKnown RBP15.28■□□□□ 0.04
DNMT3A-204ENST00000380756 PIK3C2GO75747 1445 aa15.28■□□□□ 0.04
DNMT3A-204ENST00000380756 IL16Q14005 1332 aa15.28■□□□□ 0.04
DNMT3A-204ENST00000380756 POLR3AO14802 1390 aaPredicted RBP15.28■□□□□ 0.04
DNMT3A-204ENST00000380756 TBC1D9Q6ZT07 1266 aa15.28■□□□□ 0.04
DNMT3A-204ENST00000380756 MCM10Q7L590 875 aa15.28■□□□□ 0.04
DNMT3A-204ENST00000380756 SMARCA5O60264 1052 aaPredicted RBP15.27■□□□□ 0.04
DNMT3A-204ENST00000380756 RAPGEF4Q8WZA2 1011 aa15.27■□□□□ 0.04
DNMT3A-204ENST00000380756 TNNQ9UQP3 1299 aa15.27■□□□□ 0.04
DNMT3A-204ENST00000380756 NME9Q86XW9 330 aa15.27■□□□□ 0.04
DNMT3A-204ENST00000380756 MPNDQ8N594 471 aa15.27■□□□□ 0.03
DNMT3A-204ENST00000380756 FOSBP53539 338 aa15.27■□□□□ 0.03
DNMT3A-204ENST00000380756 CARD14Q9BXL6 1004 aa15.27■□□□□ 0.03
DNMT3A-204ENST00000380756 CD109Q6YHK3 1445 aa15.26■□□□□ 0.03
DNMT3A-204ENST00000380756 COL17A1Q9UMD9 1497 aaPredicted RBP15.26■□□□□ 0.03
DNMT3A-204ENST00000380756 DNAJC5Q9H3Z4 198 aa15.26■□□□□ 0.03
DNMT3A-204ENST00000380756 HMGN5P82970 282 aaKnown RBP15.26■□□□□ 0.03
DNMT3A-204ENST00000380756 UPF3BQ9BZI7 483 aaKnown RBP15.26■□□□□ 0.03
DNMT3A-204ENST00000380756 MIS18AQ9NYP9 233 aa15.26■□□□□ 0.03
DNMT3A-204ENST00000380756 SRGAP3O43295 1099 aa15.26■□□□□ 0.03
DNMT3A-204ENST00000380756 KIAA0556O60303 1618 aa15.26■□□□□ 0.03
DNMT3A-204ENST00000380756 TPM3P06753 285 aa15.26■□□□□ 0.03
DNMT3A-204ENST00000380756 RBM10P98175 930 aaKnown RBP15.26■□□□□ 0.03
DNMT3A-204ENST00000380756 NEUROD6Q96NK8 337 aa15.26■□□□□ 0.03
DNMT3A-204ENST00000380756 TRIM5Q9C035 493 aa15.26■□□□□ 0.03
DNMT3A-204ENST00000380756 CYP46A1Q9Y6A2 500 aa15.26■□□□□ 0.03
DNMT3A-204ENST00000380756 ATF3P18847 181 aa15.25■□□□□ 0.03
DNMT3A-204ENST00000380756 CREBRFQ8IUR6 639 aa15.25■□□□□ 0.03
DNMT3A-204ENST00000380756 SYCP2Q9BX26 1530 aa15.25■□□□□ 0.03
DNMT3A-204ENST00000380756 SEC24BO95487 1268 aa15.25■□□□□ 0.03
DNMT3A-204ENST00000380756 SHANK2Q9UPX8 1470 aa15.25■□□□□ 0.03
DNMT3A-204ENST00000380756 MAP4K4O95819 1239 aaPredicted RBP15.25■□□□□ 0.03
DNMT3A-204ENST00000380756 SYCE3A1L190 88 aa15.25■□□□□ 0.03
DNMT3A-204ENST00000380756 HIP1O00291 1037 aa15.25■□□□□ 0.03
DNMT3A-204ENST00000380756 ERC1Q8IUD2 1116 aa15.25■□□□□ 0.03
DNMT3A-204ENST00000380756 NUCB1Q02818 461 aa15.24■□□□□ 0.03
DNMT3A-204ENST00000380756 TRDNQ13061 729 aa15.24■□□□□ 0.03
DNMT3A-204ENST00000380756 RASSF8Q8NHQ8 419 aa15.24■□□□□ 0.03
DNMT3A-204ENST00000380756 DMRT2Q9Y5R5 561 aa15.24■□□□□ 0.03
DNMT3A-204ENST00000380756 DUOX2Q9NRD8 1548 aa15.24■□□□□ 0.03
DNMT3A-204ENST00000380756 FBXW7Q969H0 707 aa15.24■□□□□ 0.03
DNMT3A-204ENST00000380756 SDF4Q9BRK5 362 aa15.24■□□□□ 0.03
DNMT3A-204ENST00000380756 KDM2BQ8NHM5 1336 aa15.24■□□□□ 0.03
DNMT3A-204ENST00000380756 PHF23Q9BUL5 403 aaPredicted RBP15.24■□□□□ 0.03
DNMT3A-204ENST00000380756 APPP05067 770 aa15.23■□□□□ 0.03
DNMT3A-204ENST00000380756 PLEKHO1Q53GL0 409 aaPredicted RBP15.23■□□□□ 0.03
DNMT3A-204ENST00000380756 SYNE3Q6ZMZ3 975 aa15.23■□□□□ 0.03
DNMT3A-204ENST00000380756 MX1P20591 662 aa15.23■□□□□ 0.03
DNMT3A-204ENST00000380756 TRIM29Q14134 588 aa15.23■□□□□ 0.03
DNMT3A-204ENST00000380756 HOMER1Q86YM7 354 aa15.23■□□□□ 0.03
DNMT3A-204ENST00000380756 PLCH2O75038 1416 aa15.23■□□□□ 0.03
DNMT3A-204ENST00000380756 SLC26A8Q96RN1 970 aa15.23■□□□□ 0.03
DNMT3A-204ENST00000380756 NLRP2Q9NX02 1062 aa15.23■□□□□ 0.03
DNMT3A-204ENST00000380756 ADAMTS12P58397 1594 aa15.23■□□□□ 0.03
DNMT3A-204ENST00000380756 ANKRD36BQ8N2N9 1353 aa15.22■□□□□ 0.03
DNMT3A-204ENST00000380756 FANCAO15360 1455 aa15.22■□□□□ 0.03
DNMT3A-204ENST00000380756 ADGRL2O95490 1459 aa15.22■□□□□ 0.03
DNMT3A-204ENST00000380756 FYB1O15117 783 aa15.22■□□□□ 0.03
DNMT3A-204ENST00000380756 KDM5BQ9UGL1 1544 aa15.22■□□□□ 0.03
DNMT3A-204ENST00000380756 RRP9O43818 475 aaKnown RBP15.22■□□□□ 0.03
DNMT3A-204ENST00000380756 CCDC192P0DO97 292 aa15.22■□□□□ 0.03
DNMT3A-204ENST00000380756 AEBP1Q8IUX7 1158 aa15.22■□□□□ 0.03
DNMT3A-204ENST00000380756 F6X3S4 739 aa15.21■□□□□ 0.03
DNMT3A-204ENST00000380756 XRCC6P12956 609 aaKnown RBP eCLIP15.21■□□□□ 0.03
DNMT3A-204ENST00000380756 KRT85P78386 507 aa15.21■□□□□ 0.03
DNMT3A-204ENST00000380756 CCAR2Q8N163 923 aaKnown RBP15.21■□□□□ 0.03
DNMT3A-204ENST00000380756 MBIPQ9NS73 344 aa15.21■□□□□ 0.03
DNMT3A-204ENST00000380756 MAGI3Q5TCQ9 1506 aa15.21■□□□□ 0.03
DNMT3A-204ENST00000380756 BAG4O95429 457 aaKnown RBP15.21■□□□□ 0.03
DNMT3A-204ENST00000380756 CWC27Q6UX04 472 aaKnown RBP15.21■□□□□ 0.03
DNMT3A-204ENST00000380756 AKAP17AQ02040 695 aaKnown RBP15.21■□□□□ 0.03
DNMT3A-204ENST00000380756 LARP1BQ659C4 914 aaKnown RBP15.21■□□□□ 0.03
DNMT3A-204ENST00000380756 RALYLQ86SE5 291 aaKnown RBP15.21■□□□□ 0.03
DNMT3A-204ENST00000380756 SPC24Q8NBT2 197 aa15.21■□□□□ 0.03
DNMT3A-204ENST00000380756 ARHGAP45Q92619 1136 aa15.21■□□□□ 0.03
DNMT3A-204ENST00000380756 ANKLE2Q86XL3 938 aa15.21■□□□□ 0.02
DNMT3A-204ENST00000380756 A2MP01023 1474 aa15.2■□□□□ 0.02
DNMT3A-204ENST00000380756 SAMD9Q5K651 1589 aa15.2■□□□□ 0.02
DNMT3A-204ENST00000380756 FBLN1P23142 703 aa15.2■□□□□ 0.02
DNMT3A-204ENST00000380756 ZNF530Q6P9A1 599 aaPredicted RBP15.2■□□□□ 0.02
DNMT3A-204ENST00000380756 ZNF771Q7L3S4 317 aaPredicted RBP15.2■□□□□ 0.02
DNMT3A-204ENST00000380756 KINO60870 393 aaKnown RBP15.2■□□□□ 0.02
DNMT3A-204ENST00000380756 EIF2AK4Q9P2K8 1649 aaKnown RBP15.2■□□□□ 0.02
DNMT3A-204ENST00000380756 TPD52L1Q16890 204 aaPredicted RBP15.19■□□□□ 0.02
DNMT3A-204ENST00000380756 NUTM1Q86Y26 1132 aa15.19■□□□□ 0.02
DNMT3A-204ENST00000380756 JAKMIP1Q96N16 626 aaKnown RBP15.19■□□□□ 0.02
DNMT3A-204ENST00000380756 WASHC4Q2M389 1173 aa15.19■□□□□ 0.02
DNMT3A-204ENST00000380756 DNAJC2Q99543 621 aaKnown RBP15.19■□□□□ 0.02
DNMT3A-204ENST00000380756 SMC5Q8IY18 1101 aa15.19■□□□□ 0.02
DNMT3A-204ENST00000380756 KLHL40Q2TBA0 621 aa15.19■□□□□ 0.02
DNMT3A-204ENST00000380756 PANK2Q9BZ23 570 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms