RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 HDGFL2Q7Z4V5 671 aaPredicted RBP12.89□□□□□ -0.35
HMGN1-202ENST00000380747 BRD4O60885 1362 aaPredicted RBP12.89□□□□□ -0.35
HMGN1-202ENST00000380747 KTN1Q86UP2 1357 aaKnown RBP12.89□□□□□ -0.35
HMGN1-202ENST00000380747 FAM98CQ17RN3 349 aaKnown RBP12.88□□□□□ -0.35
HMGN1-202ENST00000380747 CDCA8Q53HL2 280 aa12.88□□□□□ -0.35
HMGN1-202ENST00000380747 RGPD1P0DJD0 1748 aa12.88□□□□□ -0.35
HMGN1-202ENST00000380747 TTC21BQ7Z4L5 1316 aa12.88□□□□□ -0.35
HMGN1-202ENST00000380747 COL14A1Q05707 1796 aaKnown RBP12.87□□□□□ -0.35
HMGN1-202ENST00000380747 NLRP13Q86W25 1043 aa12.87□□□□□ -0.35
HMGN1-202ENST00000380747 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
HMGN1-202ENST00000380747 POLR3GLQ9BT43 218 aa12.87□□□□□ -0.35
HMGN1-202ENST00000380747 BTG4Q9NY30 223 aa12.87□□□□□ -0.35
HMGN1-202ENST00000380747 TERF2IPQ9NYB0 399 aa12.87□□□□□ -0.35
HMGN1-202ENST00000380747 CPSF1Q10570 1443 aaKnown RBP12.87□□□□□ -0.35
HMGN1-202ENST00000380747 SPATA31A5Q5VU36 1347 aa12.87□□□□□ -0.35
HMGN1-202ENST00000380747 SPATA31A7Q8IWB4 1347 aa12.87□□□□□ -0.35
HMGN1-202ENST00000380747 A0A0G2JS52 829 aa12.86□□□□□ -0.35
HMGN1-202ENST00000380747 NLRP6P59044 892 aa12.86□□□□□ -0.35
HMGN1-202ENST00000380747 MYT1Q01538 1121 aa12.86□□□□□ -0.35
HMGN1-202ENST00000380747 EN1Q05925 392 aaPredicted RBP12.86□□□□□ -0.35
HMGN1-202ENST00000380747 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.86□□□□□ -0.35
HMGN1-202ENST00000380747 SSH2Q76I76 1423 aa12.86□□□□□ -0.35
HMGN1-202ENST00000380747 THSD7AQ9UPZ6 1657 aa12.86□□□□□ -0.35
HMGN1-202ENST00000380747 PARD3Q8TEW0 1356 aa12.85□□□□□ -0.35
HMGN1-202ENST00000380747 NINLQ9Y2I6 1382 aa12.85□□□□□ -0.35
HMGN1-202ENST00000380747 TTC21AQ8NDW8 1320 aa12.85□□□□□ -0.35
HMGN1-202ENST00000380747 CD163L1Q9NR16 1453 aa12.85□□□□□ -0.35
HMGN1-202ENST00000380747 AKAP12Q02952 1782 aa12.84□□□□□ -0.35
HMGN1-202ENST00000380747 A0A1W2PP64 1363 aa12.84□□□□□ -0.35
HMGN1-202ENST00000380747 ZC3H6P61129 1189 aaKnown RBP12.84□□□□□ -0.35
HMGN1-202ENST00000380747 R3HDM1Q15032 1099 aaKnown RBP12.84□□□□□ -0.35
HMGN1-202ENST00000380747 SPOCK2Q92563 424 aa12.84□□□□□ -0.35
HMGN1-202ENST00000380747 PRDM11Q9NQV5 511 aa12.84□□□□□ -0.35
HMGN1-202ENST00000380747 USP19O94966 1318 aa12.84□□□□□ -0.35
HMGN1-202ENST00000380747 TNS1Q9HBL0 1735 aaKnown RBP12.83□□□□□ -0.36
HMGN1-202ENST00000380747 ZBTB7CA1YPR0 619 aa12.83□□□□□ -0.36
HMGN1-202ENST00000380747 KIAA0232Q92628 1395 aa12.82□□□□□ -0.36
HMGN1-202ENST00000380747 PHRF1Q9P1Y6 1649 aaKnown RBP12.82□□□□□ -0.36
HMGN1-202ENST00000380747 SOX12O15370 315 aa12.82□□□□□ -0.36
HMGN1-202ENST00000380747 GCP02774 474 aa12.82□□□□□ -0.36
HMGN1-202ENST00000380747 CHRNA2Q15822 529 aa12.82□□□□□ -0.36
HMGN1-202ENST00000380747 NME9Q86XW9 330 aa12.82□□□□□ -0.36
HMGN1-202ENST00000380747 CAMKK2Q96RR4 588 aa12.82□□□□□ -0.36
HMGN1-202ENST00000380747 PIK3C2AO00443 1686 aa12.82□□□□□ -0.36
HMGN1-202ENST00000380747 MON2Q7Z3U7 1717 aa12.82□□□□□ -0.36
HMGN1-202ENST00000380747 CRYBG1Q9Y4K1 1723 aa12.82□□□□□ -0.36
HMGN1-202ENST00000380747 ANKRD36BQ8N2N9 1353 aa12.81□□□□□ -0.36
HMGN1-202ENST00000380747 NRKQ7Z2Y5 1582 aa12.81□□□□□ -0.36
HMGN1-202ENST00000380747 EDC4Q6P2E9 1401 aaKnown RBP12.81□□□□□ -0.36
HMGN1-202ENST00000380747 FAM196AQ6ZSG2 479 aa12.81□□□□□ -0.36
HMGN1-202ENST00000380747 SPATA31A1Q5TZJ5 1347 aa12.81□□□□□ -0.36
HMGN1-202ENST00000380747 EZH2Q15910 746 aaKnown RBP12.8□□□□□ -0.36
HMGN1-202ENST00000380747 SPDYE1Q8NFV5 336 aaPredicted RBP12.8□□□□□ -0.36
HMGN1-202ENST00000380747 FAM182BQ5T319 152 aa12.79□□□□□ -0.36
HMGN1-202ENST00000380747 KCNH5Q8NCM2 988 aa12.79□□□□□ -0.36
HMGN1-202ENST00000380747 SLIT3O75094 1523 aa12.78□□□□□ -0.36
HMGN1-202ENST00000380747 STRN4Q9NRL3 753 aa12.78□□□□□ -0.36
HMGN1-202ENST00000380747 CPDO75976 1380 aa12.78□□□□□ -0.36
HMGN1-202ENST00000380747 USP31Q70CQ4 1352 aa12.78□□□□□ -0.36
HMGN1-202ENST00000380747 EVA1CP58658 441 aa12.77□□□□□ -0.37
HMGN1-202ENST00000380747 BARGINQ6ZT62 677 aa12.77□□□□□ -0.37
HMGN1-202ENST00000380747 REM2Q8IYK8 340 aaPredicted RBP12.77□□□□□ -0.37
HMGN1-202ENST00000380747 UTRNP46939 3433 aa12.77□□□□□ -0.37
HMGN1-202ENST00000380747 C11orf95C9JLR9 678 aaPredicted RBP12.76□□□□□ -0.37
HMGN1-202ENST00000380747 TRIM37O94972 964 aa12.76□□□□□ -0.37
HMGN1-202ENST00000380747 MYOM1P52179 1685 aa12.76□□□□□ -0.37
HMGN1-202ENST00000380747 APBA3O96018 575 aa12.75□□□□□ -0.37
HMGN1-202ENST00000380747 RREB1Q92766 1687 aa12.75□□□□□ -0.37
HMGN1-202ENST00000380747 COG3Q96JB2 828 aa12.75□□□□□ -0.37
HMGN1-202ENST00000380747 CARD14Q9BXL6 1004 aa12.75□□□□□ -0.37
HMGN1-202ENST00000380747 CLEC11AQ9Y240 323 aa12.75□□□□□ -0.37
HMGN1-202ENST00000380747 NSD3Q9BZ95 1437 aa12.74□□□□□ -0.37
HMGN1-202ENST00000380747 GGNBP2Q9H3C7 697 aa12.74□□□□□ -0.37
HMGN1-202ENST00000380747 OVOS2A0A0J9YW53 1432 aa12.73□□□□□ -0.37
HMGN1-202ENST00000380747 OVOS2Q6IE36 1432 aa12.73□□□□□ -0.37
HMGN1-202ENST00000380747 AATKQ6ZMQ8 1374 aa12.73□□□□□ -0.37
HMGN1-202ENST00000380747 FYB1O15117 783 aa12.73□□□□□ -0.37
HMGN1-202ENST00000380747 YY1P25490 414 aa12.73□□□□□ -0.37
HMGN1-202ENST00000380747 NBPF14Q5TI25 921 aa12.73□□□□□ -0.37
HMGN1-202ENST00000380747 ARHGEF25Q86VW2 580 aa12.73□□□□□ -0.37
HMGN1-202ENST00000380747 CAMTA1Q9Y6Y1 1673 aa12.73□□□□□ -0.37
HMGN1-202ENST00000380747 NFAT5O94916 1531 aa12.72□□□□□ -0.37
HMGN1-202ENST00000380747 KIF7Q2M1P5 1343 aa12.72□□□□□ -0.37
HMGN1-202ENST00000380747 PDE3BQ13370 1112 aa12.72□□□□□ -0.37
HMGN1-202ENST00000380747 LARP1Q6PKG0 1096 aaKnown RBP12.72□□□□□ -0.37
HMGN1-202ENST00000380747 PANK3Q9H999 370 aa12.72□□□□□ -0.37
HMGN1-202ENST00000380747 NUP188Q5SRE5 1749 aa12.71□□□□□ -0.37
HMGN1-202ENST00000380747 USP54Q70EL1 1684 aa12.71□□□□□ -0.37
HMGN1-202ENST00000380747 LMO7Q8WWI1 1683 aa12.71□□□□□ -0.37
HMGN1-202ENST00000380747 USP35Q9P2H5 1018 aa12.71□□□□□ -0.37
HMGN1-202ENST00000380747 AXIN2Q9Y2T1 843 aa12.71□□□□□ -0.37
HMGN1-202ENST00000380747 THRAP3Q9Y2W1 955 aaKnown RBP12.71□□□□□ -0.37
HMGN1-202ENST00000380747 CSB-PGBD3P0DP91 1061 aa12.7□□□□□ -0.38
HMGN1-202ENST00000380747 TCP11L2Q8N4U5 519 aa12.7□□□□□ -0.38
HMGN1-202ENST00000380747 SPON1Q9HCB6 807 aa12.7□□□□□ -0.38
HMGN1-202ENST00000380747 ZBTB47Q9UFB7 747 aaPredicted RBP12.7□□□□□ -0.38
HMGN1-202ENST00000380747 COL5A2P05997 1499 aaPredicted RBP12.7□□□□□ -0.38
HMGN1-202ENST00000380747 CGNL1Q0VF96 1302 aa12.69□□□□□ -0.38
HMGN1-202ENST00000380747 FBLN1P23142 703 aa12.69□□□□□ -0.38
HMGN1-202ENST00000380747 KCNQ2O43526 872 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms