RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 STK26Q9P289 416 aa14.03□□□□□ -0.16
NPHP4-202ENST00000378161 C9orf84Q5VXU9 1444 aa14.03□□□□□ -0.16
NPHP4-202ENST00000378161 GOLGA6L4A6NEF3 574 aa14.02□□□□□ -0.16
NPHP4-202ENST00000378161 LMAN1P49257 510 aa14.02□□□□□ -0.16
NPHP4-202ENST00000378161 TRHP20396 242 aaPredicted RBP14.02□□□□□ -0.16
NPHP4-202ENST00000378161 PPP2R1AP30153 589 aa14.02□□□□□ -0.16
NPHP4-202ENST00000378161 SETSIPP0DME0 302 aa14.02□□□□□ -0.17
NPHP4-202ENST00000378161 PAXBP1Q9Y5B6 917 aa14.02□□□□□ -0.17
NPHP4-202ENST00000378161 PRG4Q92954 1404 aaPredicted RBP14.02□□□□□ -0.17
NPHP4-202ENST00000378161 ST18O60284 1047 aa14.01□□□□□ -0.17
NPHP4-202ENST00000378161 RAD51AP2Q09MP3 1159 aa14.01□□□□□ -0.17
NPHP4-202ENST00000378161 AP1ARQ63HQ0 302 aa14.01□□□□□ -0.17
NPHP4-202ENST00000378161 PPM1EQ8WY54 764 aa14.01□□□□□ -0.17
NPHP4-202ENST00000378161 KIF2AO00139 706 aaPredicted RBP14.01□□□□□ -0.17
NPHP4-202ENST00000378161 CDK13Q14004 1512 aaKnown RBP14.01□□□□□ -0.17
NPHP4-202ENST00000378161 PTPRKQ15262 1439 aa14.01□□□□□ -0.17
NPHP4-202ENST00000378161 CCP110O43303 1012 aa14.01□□□□□ -0.17
NPHP4-202ENST00000378161 NF2P35240 595 aa14.01□□□□□ -0.17
NPHP4-202ENST00000378161 TTC12Q9H892 705 aaPredicted RBP14.01□□□□□ -0.17
NPHP4-202ENST00000378161 PRIM1P49642 420 aaKnown RBP14□□□□□ -0.17
NPHP4-202ENST00000378161 GBP6Q6ZN66 633 aa14□□□□□ -0.17
NPHP4-202ENST00000378161 SUFUQ9UMX1 484 aa14□□□□□ -0.17
NPHP4-202ENST00000378161 ABCC5O15440 1437 aa14□□□□□ -0.17
NPHP4-202ENST00000378161 GUCY2CP25092 1073 aa14□□□□□ -0.17
NPHP4-202ENST00000378161 RUNDC1Q96C34 613 aa14□□□□□ -0.17
NPHP4-202ENST00000378161 CALR3Q96L12 384 aaKnown RBP14□□□□□ -0.17
NPHP4-202ENST00000378161 C16orf45Q96MC5 204 aaPredicted RBP14□□□□□ -0.17
NPHP4-202ENST00000378161 LRSAM1Q6UWE0 723 aa13.99□□□□□ -0.17
NPHP4-202ENST00000378161 DDX11Q96FC9 970 aa13.99□□□□□ -0.17
NPHP4-202ENST00000378161 SSFA2P28290 1259 aa13.99□□□□□ -0.17
NPHP4-202ENST00000378161 RBSNQ9H1K0 784 aa13.99□□□□□ -0.17
NPHP4-202ENST00000378161 CXorf56Q9H5V9 222 aa13.99□□□□□ -0.17
NPHP4-202ENST00000378161 PDE3AQ14432 1141 aa13.99□□□□□ -0.17
NPHP4-202ENST00000378161 NBPF6Q5VWK0 638 aa13.99□□□□□ -0.17
NPHP4-202ENST00000378161 NBPF5PQ86XG9 351 aaPredicted RBP13.99□□□□□ -0.17
NPHP4-202ENST00000378161 NBPF4Q96M43 638 aa13.99□□□□□ -0.17
NPHP4-202ENST00000378161 USP25Q9UHP3 1055 aa13.99□□□□□ -0.17
NPHP4-202ENST00000378161 K7ELQ4 463 aaPredicted RBP13.99□□□□□ -0.17
NPHP4-202ENST00000378161 NEBLO76041 1014 aa13.99□□□□□ -0.17
NPHP4-202ENST00000378161 BAG4O95429 457 aaKnown RBP13.99□□□□□ -0.17
NPHP4-202ENST00000378161 E2F4Q16254 413 aa13.99□□□□□ -0.17
NPHP4-202ENST00000378161 CYB5RLQ6IPT4 315 aa13.99□□□□□ -0.17
NPHP4-202ENST00000378161 CARD10Q9BWT7 1032 aa13.99□□□□□ -0.17
NPHP4-202ENST00000378161 DDX19BQ9UMR2 479 aa13.99□□□□□ -0.17
NPHP4-202ENST00000378161 ZSCAN26Q16670 478 aa13.98□□□□□ -0.17
NPHP4-202ENST00000378161 FMNL3Q8IVF7 1028 aa13.98□□□□□ -0.17
NPHP4-202ENST00000378161 OSCARQ8IYS5 282 aa13.98□□□□□ -0.17
NPHP4-202ENST00000378161 DZIP1LQ8IYY4 767 aaKnown RBP13.98□□□□□ -0.17
NPHP4-202ENST00000378161 MRC2Q9UBG0 1479 aa13.98□□□□□ -0.17
NPHP4-202ENST00000378161 SMTNL1A8MU46 457 aa13.98□□□□□ -0.17
NPHP4-202ENST00000378161 ZNF445P59923 1031 aa13.98□□□□□ -0.17
NPHP4-202ENST00000378161 C20orf194Q5TEA3 1177 aa13.98□□□□□ -0.17
NPHP4-202ENST00000378161 PIK3R5Q8WYR1 880 aa13.98□□□□□ -0.17
NPHP4-202ENST00000378161 EGFL6Q8IUX8 553 aa13.97□□□□□ -0.17
NPHP4-202ENST00000378161 ANTXR1Q9H6X2 564 aa13.97□□□□□ -0.17
NPHP4-202ENST00000378161 BRPF1P55201 1214 aaPredicted RBP13.97□□□□□ -0.17
NPHP4-202ENST00000378161 HOMER1Q86YM7 354 aa13.97□□□□□ -0.17
NPHP4-202ENST00000378161 CCAR2Q8N163 923 aaKnown RBP13.97□□□□□ -0.17
NPHP4-202ENST00000378161 NUCKS1Q9H1E3 243 aaKnown RBP13.97□□□□□ -0.17
NPHP4-202ENST00000378161 TMCO5BA8MYB1 307 aa13.97□□□□□ -0.17
NPHP4-202ENST00000378161 MYO1CO00159 1063 aa13.97□□□□□ -0.17
NPHP4-202ENST00000378161 SART3Q15020 963 aaKnown RBP13.97□□□□□ -0.17
NPHP4-202ENST00000378161 SLC52A1Q9NWF4 448 aa13.97□□□□□ -0.17
NPHP4-202ENST00000378161 V9GYY5 206 aaPredicted RBP13.97□□□□□ -0.17
NPHP4-202ENST00000378161 FILIP1Q7Z7B0 1213 aa13.96□□□□□ -0.17
NPHP4-202ENST00000378161 PANK1Q8TE04 598 aa13.96□□□□□ -0.17
NPHP4-202ENST00000378161 DONSONQ9NYP3 566 aa13.96□□□□□ -0.17
NPHP4-202ENST00000378161 ADCY5O95622 1261 aa13.96□□□□□ -0.17
NPHP4-202ENST00000378161 PSEN1P49768 467 aa13.96□□□□□ -0.17
NPHP4-202ENST00000378161 MICALL1Q8N3F8 863 aa13.96□□□□□ -0.17
NPHP4-202ENST00000378161 GTF3C6Q969F1 213 aa13.96□□□□□ -0.17
NPHP4-202ENST00000378161 EVC2Q86UK5 1308 aa13.96□□□□□ -0.18
NPHP4-202ENST00000378161 CCDC196A0A1B0GTZ2 297 aa13.96□□□□□ -0.18
NPHP4-202ENST00000378161 TTC36A6NLP5 189 aa13.96□□□□□ -0.18
NPHP4-202ENST00000378161 SKIDA1Q1XH10 827 aa13.96□□□□□ -0.18
NPHP4-202ENST00000378161 UVSSAQ2YD98 709 aa13.96□□□□□ -0.18
NPHP4-202ENST00000378161 UBXN4Q92575 508 aa13.96□□□□□ -0.18
NPHP4-202ENST00000378161 IQGAP2Q13576 1575 aa13.95□□□□□ -0.18
NPHP4-202ENST00000378161 RAI14Q9P0K7 980 aa13.95□□□□□ -0.18
NPHP4-202ENST00000378161 PES1O00541 588 aaKnown RBP13.95□□□□□ -0.18
NPHP4-202ENST00000378161 CDR1P51861 262 aa13.95□□□□□ -0.18
NPHP4-202ENST00000378161 RAB3GAP1Q15042 981 aa13.94□□□□□ -0.18
NPHP4-202ENST00000378161 FOXD4L6Q3SYB3 417 aaPredicted RBP13.94□□□□□ -0.18
NPHP4-202ENST00000378161 FOXD4L3Q6VB84 417 aaPredicted RBP13.94□□□□□ -0.18
NPHP4-202ENST00000378161 ZNF513Q8N8E2 541 aaPredicted RBP13.94□□□□□ -0.18
NPHP4-202ENST00000378161 KIAA0586Q9BVV6 1533 aa13.94□□□□□ -0.18
NPHP4-202ENST00000378161 ERBINQ96RT1 1412 aa13.94□□□□□ -0.18
NPHP4-202ENST00000378161 DDX41Q9UJV9 622 aaKnown RBP13.94□□□□□ -0.18
NPHP4-202ENST00000378161 PDZRN3Q9UPQ7 1066 aa13.94□□□□□ -0.18
NPHP4-202ENST00000378161 APBB1O00213 710 aa13.94□□□□□ -0.18
NPHP4-202ENST00000378161 NEK11Q8NG66 645 aa13.94□□□□□ -0.18
NPHP4-202ENST00000378161 THOC2Q8NI27 1593 aaKnown RBP13.94□□□□□ -0.18
NPHP4-202ENST00000378161 REC8O95072 547 aa13.93□□□□□ -0.18
NPHP4-202ENST00000378161 SYT10Q6XYQ8 523 aa13.93□□□□□ -0.18
NPHP4-202ENST00000378161 FAM212AQ96EL1 285 aa13.93□□□□□ -0.18
NPHP4-202ENST00000378161 SLFN14P0C7P3 912 aa13.93□□□□□ -0.18
NPHP4-202ENST00000378161 PTPN14Q15678 1187 aa13.93□□□□□ -0.18
NPHP4-202ENST00000378161 MCTP2Q6DN12 878 aa13.93□□□□□ -0.18
NPHP4-202ENST00000378161 KIF18AQ8NI77 898 aa13.93□□□□□ -0.18
NPHP4-202ENST00000378161 SYNJ2O15056 1496 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms