RNA–Protein interactions for RNA: ENST00000378123.4

PCDHA8-201, Transcript of protocadherin alpha 8, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA8, Length 2,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA8-201ENST00000378123 SOX12O15370 315 aa22.57■■□□□ 1.2
PCDHA8-201ENST00000378123 CCDC61Q9Y6R9 512 aa22.57■■□□□ 1.2
PCDHA8-201ENST00000378123 EDC4Q6P2E9 1401 aaKnown RBP22.57■■□□□ 1.2
PCDHA8-201ENST00000378123 AEBP1Q8IUX7 1158 aa22.57■■□□□ 1.2
PCDHA8-201ENST00000378123 SPATA31D1Q6ZQQ2 1576 aa22.57■■□□□ 1.2
PCDHA8-201ENST00000378123 PRR36Q9H6K5 1346 aa22.57■■□□□ 1.2
PCDHA8-201ENST00000378123 DLC1Q96QB1 1528 aa22.56■■□□□ 1.2
PCDHA8-201ENST00000378123 ZMYM3Q14202 1370 aa22.56■■□□□ 1.2
PCDHA8-201ENST00000378123 SETD1AO15047 1707 aaKnown RBP22.56■■□□□ 1.2
PCDHA8-201ENST00000378123 ZBTB7BO15156 539 aaPredicted RBP22.56■■□□□ 1.2
PCDHA8-201ENST00000378123 PPP6R1Q9UPN7 881 aa22.56■■□□□ 1.2
PCDHA8-201ENST00000378123 NUCB1Q02818 461 aa22.55■■□□□ 1.2
PCDHA8-201ENST00000378123 TWISTNBQ3B726 338 aaPredicted RBP22.55■■□□□ 1.2
PCDHA8-201ENST00000378123 GNAI1P63096 354 aa22.54■■□□□ 1.2
PCDHA8-201ENST00000378123 ANKRD45Q5TZF3 282 aa22.54■■□□□ 1.2
PCDHA8-201ENST00000378123 CDC42BPGQ6DT37 1551 aa22.54■■□□□ 1.2
PCDHA8-201ENST00000378123 NRXN3Q9Y4C0 1643 aa22.54■■□□□ 1.2
PCDHA8-201ENST00000378123 KRT24Q2M2I5 525 aa22.54■■□□□ 1.2
PCDHA8-201ENST00000378123 CHD1LQ86WJ1 897 aa22.54■■□□□ 1.2
PCDHA8-201ENST00000378123 IFT57Q9NWB7 429 aa22.53■■□□□ 1.2
PCDHA8-201ENST00000378123 AGLP35573 1532 aa22.53■■□□□ 1.2
PCDHA8-201ENST00000378123 PLPPR3Q6T4P5 718 aa22.53■■□□□ 1.2
PCDHA8-201ENST00000378123 ZNF853P0CG23 659 aa22.52■■□□□ 1.2
PCDHA8-201ENST00000378123 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.51■■□□□ 1.19
PCDHA8-201ENST00000378123 SIRT2Q8IXJ6 389 aa22.51■■□□□ 1.19
PCDHA8-201ENST00000378123 SULT6B1Q6IMI4 303 aa22.5■■□□□ 1.19
PCDHA8-201ENST00000378123 CFAP44Q96MT7 982 aa22.49■■□□□ 1.19
PCDHA8-201ENST00000378123 ROBO2Q9HCK4 1378 aa22.49■■□□□ 1.19
PCDHA8-201ENST00000378123 CALD1Q05682 793 aaKnown RBP22.48■■□□□ 1.19
PCDHA8-201ENST00000378123 CDK12Q9NYV4 1490 aaPredicted RBP22.48■■□□□ 1.19
PCDHA8-201ENST00000378123 BRPF1P55201 1214 aaPredicted RBP22.47■■□□□ 1.19
PCDHA8-201ENST00000378123 EIF4A2Q14240 407 aaKnown RBP22.47■■□□□ 1.19
PCDHA8-201ENST00000378123 MCM10Q7L590 875 aa22.47■■□□□ 1.19
PCDHA8-201ENST00000378123 ZNF428Q96B54 188 aa22.46■■□□□ 1.19
PCDHA8-201ENST00000378123 AATKQ6ZMQ8 1374 aa22.46■■□□□ 1.19
PCDHA8-201ENST00000378123 SLC26A8Q96RN1 970 aa22.46■■□□□ 1.19
PCDHA8-201ENST00000378123 REREQ9P2R6 1566 aa22.46■■□□□ 1.19
PCDHA8-201ENST00000378123 HSP90AB2PQ58FF8 381 aa22.45■■□□□ 1.19
PCDHA8-201ENST00000378123 CEBPAP49715 358 aaPredicted RBP22.45■■□□□ 1.18
PCDHA8-201ENST00000378123 ARXQ96QS3 562 aa22.45■■□□□ 1.18
PCDHA8-201ENST00000378123 ACEP12821 1306 aa22.45■■□□□ 1.18
PCDHA8-201ENST00000378123 LTKP29376 864 aa22.44■■□□□ 1.18
PCDHA8-201ENST00000378123 ARHGAP45Q92619 1136 aa22.44■■□□□ 1.18
PCDHA8-201ENST00000378123 ABCC4O15439 1325 aa22.43■■□□□ 1.18
PCDHA8-201ENST00000378123 MIS18AQ9NYP9 233 aa22.43■■□□□ 1.18
PCDHA8-201ENST00000378123 PTCH1Q13635 1447 aa22.43■■□□□ 1.18
PCDHA8-201ENST00000378123 DLG5Q8TDM6 1919 aa22.43■■□□□ 1.18
PCDHA8-201ENST00000378123 TTC21BQ7Z4L5 1316 aa22.43■■□□□ 1.18
PCDHA8-201ENST00000378123 ZNF692Q9BU19 519 aaPredicted RBP22.42■■□□□ 1.18
PCDHA8-201ENST00000378123 TNRQ92752 1358 aa22.42■■□□□ 1.18
PCDHA8-201ENST00000378123 LMOD3Q0VAK6 560 aa22.42■■□□□ 1.18
PCDHA8-201ENST00000378123 HDGFP51858 240 aaKnown RBP22.41■■□□□ 1.18
PCDHA8-201ENST00000378123 TMEM2Q9UHN6 1383 aa22.4■■□□□ 1.18
PCDHA8-201ENST00000378123 PIK3R4Q99570 1358 aa22.4■■□□□ 1.18
PCDHA8-201ENST00000378123 GCC1Q96CN9 775 aa22.4■■□□□ 1.18
PCDHA8-201ENST00000378123 GZF1Q9H116 711 aaPredicted RBP22.39■■□□□ 1.18
PCDHA8-201ENST00000378123 FOXO3O43524 673 aa22.39■■□□□ 1.17
PCDHA8-201ENST00000378123 BMP2KLQ5H9B9 411 aa22.39■■□□□ 1.17
PCDHA8-201ENST00000378123 HSCBQ8IWL3 235 aa22.38■■□□□ 1.17
PCDHA8-201ENST00000378123 APBB1O00213 710 aa22.38■■□□□ 1.17
PCDHA8-201ENST00000378123 C16orf71Q8IYS4 520 aaPredicted RBP22.38■■□□□ 1.17
PCDHA8-201ENST00000378123 API5Q9BZZ5 524 aaKnown RBP22.37■■□□□ 1.17
PCDHA8-201ENST00000378123 TBC1D9Q6ZT07 1266 aa22.37■■□□□ 1.17
PCDHA8-201ENST00000378123 FOXD4L1Q9NU39 408 aa22.37■■□□□ 1.17
PCDHA8-201ENST00000378123 MON2Q7Z3U7 1717 aa22.37■■□□□ 1.17
PCDHA8-201ENST00000378123 TECPR2O15040 1411 aa22.36■■□□□ 1.17
PCDHA8-201ENST00000378123 SIRT1Q96EB6 747 aa22.36■■□□□ 1.17
PCDHA8-201ENST00000378123 RBM42Q9BTD8 480 aaKnown RBP22.36■■□□□ 1.17
PCDHA8-201ENST00000378123 ADAMTS13Q76LX8 1427 aa22.36■■□□□ 1.17
PCDHA8-201ENST00000378123 C3P01024 1663 aa22.36■■□□□ 1.17
PCDHA8-201ENST00000378123 RBM25P49756 843 aaKnown RBP22.35■■□□□ 1.17
PCDHA8-201ENST00000378123 CD2BP2O95400 341 aaKnown RBP22.35■■□□□ 1.17
PCDHA8-201ENST00000378123 MCM4P33991 863 aa22.34■■□□□ 1.17
PCDHA8-201ENST00000378123 KIF2CQ99661 725 aa22.34■■□□□ 1.17
PCDHA8-201ENST00000378123 CHMP5Q9NZZ3 219 aa22.34■■□□□ 1.17
PCDHA8-201ENST00000378123 OTUD7AQ8TE49 926 aaPredicted RBP22.33■■□□□ 1.17
PCDHA8-201ENST00000378123 CHMP4BQ9H444 224 aaKnown RBP22.33■■□□□ 1.17
PCDHA8-201ENST00000378123 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.33■■□□□ 1.17
PCDHA8-201ENST00000378123 CHL1O00533 1208 aa22.33■■□□□ 1.16
PCDHA8-201ENST00000378123 GSPT1P15170 499 aaKnown RBP22.32■■□□□ 1.16
PCDHA8-201ENST00000378123 ITSN1Q15811 1721 aa22.32■■□□□ 1.16
PCDHA8-201ENST00000378123 AKAP12Q02952 1782 aa22.32■■□□□ 1.16
PCDHA8-201ENST00000378123 SMARCA5O60264 1052 aaPredicted RBP22.3■■□□□ 1.16
PCDHA8-201ENST00000378123 PLEKHG3A1L390 1219 aa22.3■■□□□ 1.16
PCDHA8-201ENST00000378123 NUTM2GQ5VZR2 741 aa22.3■■□□□ 1.16
PCDHA8-201ENST00000378123 PLEKHM2Q8IWE5 1019 aa22.3■■□□□ 1.16
PCDHA8-201ENST00000378123 MAP3K19Q56UN5 1328 aa22.3■■□□□ 1.16
PCDHA8-201ENST00000378123 SLC4A2P04920 1241 aa22.29■■□□□ 1.16
PCDHA8-201ENST00000378123 USP6P35125 1406 aa22.29■■□□□ 1.16
PCDHA8-201ENST00000378123 PTPRUQ92729 1446 aa22.29■■□□□ 1.16
PCDHA8-201ENST00000378123 MEIS3Q99687 375 aa22.29■■□□□ 1.16
PCDHA8-201ENST00000378123 AMOTL2Q9Y2J4 779 aa22.29■■□□□ 1.16
PCDHA8-201ENST00000378123 KNDC1Q76NI1 1749 aa22.29■■□□□ 1.16
PCDHA8-201ENST00000378123 OVOS2A0A0J9YW53 1432 aa22.29■■□□□ 1.16
PCDHA8-201ENST00000378123 OVOS2Q6IE36 1432 aa22.29■■□□□ 1.16
PCDHA8-201ENST00000378123 HSP90AB1P08238 724 aaKnown RBP22.28■■□□□ 1.16
PCDHA8-201ENST00000378123 MTHFSDQ2M296 383 aaKnown RBP22.28■■□□□ 1.16
PCDHA8-201ENST00000378123 F6X3S4 739 aa22.28■■□□□ 1.16
PCDHA8-201ENST00000378123 INTS3Q68E01 1043 aaKnown RBP22.28■■□□□ 1.16
PCDHA8-201ENST00000378123 G2E3Q7L622 706 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms