RNA–Protein interactions for RNA: ENST00000376909.6

SSX9-201, Transcript of Protein SSX9, humanhuman

BASIC

Gene SSX9, Length 591 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-201ENST00000376909 KRT28Q7Z3Y7 464 aa10.4□□□□□ -0.74
SSX9-201ENST00000376909 ABTB2Q8N961 1025 aa10.4□□□□□ -0.74
SSX9-201ENST00000376909 KIF12Q96FN5 646 aa10.4□□□□□ -0.74
SSX9-201ENST00000376909 DCBLD2Q96PD2 775 aa10.4□□□□□ -0.74
SSX9-201ENST00000376909 KIF20BQ96Q89 1820 aa10.4□□□□□ -0.75
SSX9-201ENST00000376909 AATKQ6ZMQ8 1374 aa10.39□□□□□ -0.75
SSX9-201ENST00000376909 WDR43Q15061 677 aaKnown RBP eCLIP10.39□□□□□ -0.75
SSX9-201ENST00000376909 OVOS2A0A0J9YW53 1432 aa10.39□□□□□ -0.75
SSX9-201ENST00000376909 OVOS2Q6IE36 1432 aa10.39□□□□□ -0.75
SSX9-201ENST00000376909 NPHP3Q7Z494 1330 aa10.38□□□□□ -0.75
SSX9-201ENST00000376909 KIF1AQ12756 1690 aa10.38□□□□□ -0.75
SSX9-201ENST00000376909 XIRP1Q702N8 1843 aaKnown RBP10.38□□□□□ -0.75
SSX9-201ENST00000376909 LTBP4Q8N2S1 1624 aa10.38□□□□□ -0.75
SSX9-201ENST00000376909 GALR2O43603 387 aaPredicted RBP10.38□□□□□ -0.75
SSX9-201ENST00000376909 XPCQ01831 940 aaPredicted RBP10.38□□□□□ -0.75
SSX9-201ENST00000376909 BRINP3Q76B58 766 aa10.38□□□□□ -0.75
SSX9-201ENST00000376909 POLKQ9UBT6 870 aa10.38□□□□□ -0.75
SSX9-201ENST00000376909 ANKRD26Q9UPS8 1709 aa10.38□□□□□ -0.75
SSX9-201ENST00000376909 CENPBP07199 599 aaPredicted RBP10.37□□□□□ -0.75
SSX9-201ENST00000376909 FBLN1P23142 703 aa10.37□□□□□ -0.75
SSX9-201ENST00000376909 HNRNPUQ00839 825 aaKnown RBP eCLIP10.37□□□□□ -0.75
SSX9-201ENST00000376909 NUTM2GQ5VZR2 741 aa10.37□□□□□ -0.75
SSX9-201ENST00000376909 INSRP06213 1382 aa10.37□□□□□ -0.75
SSX9-201ENST00000376909 PPM1GO15355 546 aaPredicted RBP10.36□□□□□ -0.75
SSX9-201ENST00000376909 DDX17Q92841 729 aaKnown RBP10.36□□□□□ -0.75
SSX9-201ENST00000376909 ADAMTS8Q9UP79 889 aa10.36□□□□□ -0.75
SSX9-201ENST00000376909 NUDCQ9Y266 331 aa10.36□□□□□ -0.75
SSX9-201ENST00000376909 SBNO1A3KN83 1393 aa10.36□□□□□ -0.75
SSX9-201ENST00000376909 SOX12O15370 315 aa10.35□□□□□ -0.75
SSX9-201ENST00000376909 RRS1Q15050 365 aaKnown RBP10.35□□□□□ -0.75
SSX9-201ENST00000376909 LMOD2Q6P5Q4 547 aa10.35□□□□□ -0.75
SSX9-201ENST00000376909 EMILIN1Q9Y6C2 1016 aa10.35□□□□□ -0.75
SSX9-201ENST00000376909 PNPLA6Q8IY17 1366 aa10.35□□□□□ -0.75
SSX9-201ENST00000376909 PIK3C2AO00443 1686 aa10.34□□□□□ -0.75
SSX9-201ENST00000376909 SMG6Q86US8 1419 aaKnown RBP10.34□□□□□ -0.75
SSX9-201ENST00000376909 DIAPH1O60610 1272 aaKnown RBP10.34□□□□□ -0.75
SSX9-201ENST00000376909 MAP3K13O43283 966 aa10.33□□□□□ -0.76
SSX9-201ENST00000376909 CHRM1P11229 460 aaPredicted RBP10.33□□□□□ -0.76
SSX9-201ENST00000376909 KCNH5Q8NCM2 988 aa10.33□□□□□ -0.76
SSX9-201ENST00000376909 MS4A3Q96HJ5 214 aa10.33□□□□□ -0.76
SSX9-201ENST00000376909 BLMP54132 1417 aaPredicted RBP10.33□□□□□ -0.76
SSX9-201ENST00000376909 SOS2Q07890 1332 aaPredicted RBP10.33□□□□□ -0.76
SSX9-201ENST00000376909 MAP3K19Q56UN5 1328 aa10.33□□□□□ -0.76
SSX9-201ENST00000376909 SPATA31A3Q5VYP0 1347 aa10.33□□□□□ -0.76
SSX9-201ENST00000376909 COL3A1P02461 1466 aaPredicted RBP10.32□□□□□ -0.76
SSX9-201ENST00000376909 PXDNQ92626 1479 aa10.32□□□□□ -0.76
SSX9-201ENST00000376909 CDK12Q9NYV4 1490 aaPredicted RBP10.32□□□□□ -0.76
SSX9-201ENST00000376909 U2SURPO15042 1029 aaKnown RBP10.32□□□□□ -0.76
SSX9-201ENST00000376909 U2AF1L5P0DN76 240 aaPredicted RBP10.32□□□□□ -0.76
SSX9-201ENST00000376909 AMPHP49418 695 aa10.32□□□□□ -0.76
SSX9-201ENST00000376909 U2AF1Q01081 240 aaKnown RBP eCLIP10.32□□□□□ -0.76
SSX9-201ENST00000376909 TNS3Q68CZ2 1445 aa10.32□□□□□ -0.76
SSX9-201ENST00000376909 USP19O94966 1318 aa10.32□□□□□ -0.76
SSX9-201ENST00000376909 ARHGEF10O15013 1369 aa10.31□□□□□ -0.76
SSX9-201ENST00000376909 TRPM3Q9HCF6 1732 aaPredicted RBP10.31□□□□□ -0.76
SSX9-201ENST00000376909 TOM1O60784 492 aa10.31□□□□□ -0.76
SSX9-201ENST00000376909 GCP02774 474 aa10.31□□□□□ -0.76
SSX9-201ENST00000376909 USP54Q70EL1 1684 aa10.31□□□□□ -0.76
SSX9-201ENST00000376909 ZBED9Q6R2W3 1325 aa10.31□□□□□ -0.76
SSX9-201ENST00000376909 FLT4P35916 1363 aa10.3□□□□□ -0.76
SSX9-201ENST00000376909 KIF24Q5T7B8 1368 aa10.3□□□□□ -0.76
SSX9-201ENST00000376909 IL13P35225 146 aa10.3□□□□□ -0.76
SSX9-201ENST00000376909 HSP90AB2PQ58FF8 381 aa10.3□□□□□ -0.76
SSX9-201ENST00000376909 PCDHB13Q9Y5F0 798 aa10.3□□□□□ -0.76
SSX9-201ENST00000376909 CCDC146Q8IYE0 955 aa10.29□□□□□ -0.76
SSX9-201ENST00000376909 RUNDC1Q96C34 613 aa10.29□□□□□ -0.76
SSX9-201ENST00000376909 PNNQ9H307 717 aaKnown RBP10.29□□□□□ -0.76
SSX9-201ENST00000376909 SLIT3O75094 1523 aa10.28□□□□□ -0.76
SSX9-201ENST00000376909 RTL1A6NKG5 1358 aa10.28□□□□□ -0.76
SSX9-201ENST00000376909 UBAP1LF5GYI3 381 aa10.28□□□□□ -0.76
SSX9-201ENST00000376909 POTEIP0CG38 1075 aa10.28□□□□□ -0.76
SSX9-201ENST00000376909 HOXC9P31274 260 aa10.28□□□□□ -0.76
SSX9-201ENST00000376909 EIF4A2Q14240 407 aaKnown RBP10.28□□□□□ -0.76
SSX9-201ENST00000376909 ARHGEF25Q86VW2 580 aa10.28□□□□□ -0.76
SSX9-201ENST00000376909 IP6K1Q92551 441 aa10.28□□□□□ -0.76
SSX9-201ENST00000376909 SHPRHQ149N8 1683 aa10.28□□□□□ -0.76
SSX9-201ENST00000376909 NFAT5O94916 1531 aa10.28□□□□□ -0.76
SSX9-201ENST00000376909 SENP3-EIF4A1A0A087X0R7 540 aa10.27□□□□□ -0.77
SSX9-201ENST00000376909 ZBTB7CA1YPR0 619 aa10.27□□□□□ -0.77
SSX9-201ENST00000376909 FCHSD2O94868 740 aa10.27□□□□□ -0.77
SSX9-201ENST00000376909 TIE1P35590 1138 aa10.27□□□□□ -0.77
SSX9-201ENST00000376909 ASTLQ6HA08 431 aaPredicted RBP10.27□□□□□ -0.77
SSX9-201ENST00000376909 CERKQ8TCT0 537 aa10.27□□□□□ -0.77
SSX9-201ENST00000376909 LRRC59Q96AG4 307 aaKnown RBP10.27□□□□□ -0.77
SSX9-201ENST00000376909 SALL2Q9Y467 1007 aaPredicted RBP10.27□□□□□ -0.77
SSX9-201ENST00000376909 IQSEC2Q5JU85 1478 aa10.27□□□□□ -0.77
SSX9-201ENST00000376909 ALS2Q96Q42 1657 aa10.27□□□□□ -0.77
SSX9-201ENST00000376909 MARF1Q9Y4F3 1742 aaKnown RBP10.27□□□□□ -0.77
SSX9-201ENST00000376909 MAP2P11137 1827 aaKnown RBP10.26□□□□□ -0.77
SSX9-201ENST00000376909 APAF1O14727 1248 aa10.26□□□□□ -0.77
SSX9-201ENST00000376909 PIP4K2BP78356 416 aa10.26□□□□□ -0.77
SSX9-201ENST00000376909 NGEFQ8N5V2 710 aa10.26□□□□□ -0.77
SSX9-201ENST00000376909 CABLES1Q8TDN4 633 aa10.26□□□□□ -0.77
SSX9-201ENST00000376909 CIZ1Q9ULV3 898 aaPredicted RBP10.26□□□□□ -0.77
SSX9-201ENST00000376909 MED1Q15648 1581 aaPredicted RBP10.26□□□□□ -0.77
SSX9-201ENST00000376909 PEAK1Q9H792 1746 aa10.25□□□□□ -0.77
SSX9-201ENST00000376909 NEFMP07197 916 aa10.25□□□□□ -0.77
SSX9-201ENST00000376909 PYGBP11216 843 aa10.25□□□□□ -0.77
SSX9-201ENST00000376909 ZC3H6P61129 1189 aaKnown RBP10.25□□□□□ -0.77
SSX9-201ENST00000376909 PLEKHF1Q96S99 279 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms